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=================================================This is an automated summary of the status of the R-bugsrepository.Note that this may be neither complete nor perfectlycorrect at any given instance: Not all bugs are reported,and some reported bugs may have been fixed, but therepository not yet updated.Some bug fixes are difficult to verify because they pertainto specific hardware or operating system versions. If youhave information to contribute, please do so.If you happen to know how to fix a problem please sendpatches to the bug repository, too.New bugs are reported either through the webinterface at r-bugs.r-project.org or via email tor-bugs@r-project.org. The bug.report() function can beused to automate parts of the procedure on many systems.Followups on older bugs can be done by including the string"(PR#999)" in the Subject of an email (change 999 to theactual reference number, of course!).=================================================Directory: Accuracy* PR# 1228 *Subject: bug with var(rep(1e30, 3))From: Emmanuel Paradis <paradis@isem.univ-montp2.fr>Date: Wed, 26 Dec 2001 13:03:31 +0100* PR# 1664 *Subject: Bug in rnorm.From: Rolf Turner <rolf@math.unb.ca>Date: Thu, 13 Jun 2002 16:35:59 -0300 (ADT)..Strange interaction between "Marsaglia-Multicarry" generator and.."Kinderman-Ramage"..method for normal variates. Apparently, switching either of them will help.* PR# 2214 *Subject: qgamma precisionFrom: terra@diku.dkDate: Fri, 25 Oct 2002 16:50:17 +0200 (MET DST)Directory: Add-ons* PR# 974 *Subject: Lattice: panel.superpose with ordered factor groupsFrom: John Maindonald <john.maindonald@anu.edu.au>Date: Sat, 9 Jun 2001 11:08:51 +1000 (EST)..The warning is standard S and R behaviour...Probably xyplot needs to avoid it (by unclassing?)..Still there in lattice 0.3-0, 0.6-8* PR# 1178 *Subject: segfault using svm from e1071From: Jan Rychter <jan@rychter.com>Date: Tue, 20 Nov 2001 23:38:17 +0100* PR# 1199 *Subject: pixmap: infinite recursion with nonascii pnm-filesFrom: thomas.baumann@ch.tum.deDate: Fri, 7 Dec 2001 11:07:52 +0100 (CET)* PR# 1361 *Subject: Matrix identification bugFrom: hyu@stats.uwo.caDate: Tue, 5 Mar 2002 21:19:46 +0100 (MET)..seems to be about Matrix package, not solve* PR# 1662 *Subject: fisher.test FEXACT memory bug "should not occur"From: Martin Maechler <maechler@stat.math.ethz.ch>Date: Thu, 13 Jun 2002 08:21:50 +0200..The supplementary (table of sum one) is fixed for 1.5.1...Detection code for the first problem has been added to 1.5.1 which will stop..the crash, but the underlying cause is still open.* PR# 1716 *Subject: rdiscrete in e1071 fails when n==1From: "John Aitchison" <jaitchis@hwy.com.au>Date: Fri, 28 Jun 2002 10:28:17 +1000* PR# 1729 *Subject: problem with qq( )From: Jarno.Tuimala@Helsinki.FiDate: Tue, 2 Jul 2002 10:37:10 +0200 (MET DST)..A report on lattice* PR# 1741 *Subject: groupedData constructor from a functionFrom: dieter.menne@menne-biomed.deDate: Thu, 4 Jul 2002 15:59:59 +0200 (MET DST)* PR# 1901 *Subject: svm seg faultsFrom: stefan.boehringer+science@uni-bochum.deDate: Tue, 13 Aug 2002 14:12:17 +0200 (MET DST)..Seem to be due to gcc `2.96' from RH7.3* PR# 1972 *Subject: lattice installFrom: robert.king@newcastle.edu.auDate: Mon, 2 Sep 2002 04:55:41 +0200 (MET DST)..Perhaps lattice should require(grid) and print a clearer message?* PR# 1974 *Subject: Rwave installation problemFrom: ld-temp-qt3i@pobox.comDate: Mon, 2 Sep 2002 09:27:36 +0200 (MET DST)..Instead, this should use ISO C headers, namely <stdlib.h>* PR# 2173 *Subject: xlim in plot.survfit() [with a discussion on "..."]From: jerome@hivnet.ubc.caDate: Wed, 16 Oct 2002 18:46:11 +0200 (MET DST)* PR# 2320 *Subject: Segmentation fault using "survival" packageFrom: jerome@hivnet.ubc.caDate: Sat, 23 Nov 2002 00:51:50 +0100 (MET)* PR# 2322 *Subject: simplexFrom: george@lecompte.orgDate: Sat, 23 Nov 2002 17:30:37 +0100 (MET)..report on boot, I think (not mentioned, though)* PR# 2352 *Subject: avas: segmentation fault on empty argsFrom: vograno@arbitrade.comDate: Fri, 6 Dec 2002 19:41:48 +0100 (MET)* PR# 2363 *Subject: nlme() and parameters "model", "fixed" and "random"From: jerome@hivnet.ubc.caDate: Wed, 11 Dec 2002 22:29:47 +0100 (MET)* PR# 2369 *Subject: convergence problem with nlme()From: jerome@hivnet.ubc.caDate: Thu, 12 Dec 2002 23:43:14 +0100 (MET)* PR# 2374 *Subject: quantreg package - predict method for rq objectsFrom: John Maindonald <u9801539@leonard.anu.edu.au>Date: Sat, 14 Dec 2002 20:46:34 +1100 (EST)* PR# 2384 *Subject: degrees of freedom in nlme()From: jerome@hivnet.ubc.caDate: Fri, 20 Dec 2002 01:40:06 +0100 (MET)* PR# 2385 *Subject: read.xport and lookup.xport in foreignFrom: Frank E Harrell Jr <fharrell@virginia.edu>Date: Fri, 20 Dec 2002 12:47:58 -0500* PR# 2386 *Subject: ace and avas in acepackFrom: Frank E Harrell Jr <fharrell@virginia.edu>Date: Fri, 20 Dec 2002 12:59:07 -0500* PR# 2480 *Subject: bug in CrossTable (package:gregmisc)From: John_Hendrickx@yahoo.comDate: Tue, 21 Jan 2003 13:51:01 +0100 (MET)* PR# 2499 *Subject: survival bug?From: Pius Korner <korner@eco.umnw.ethz.ch>Date: Mon, 27 Jan 2003 17:28:11 +0100..Needs to resubmit in more useful format.Directory: AnalysesnoneDirectory: Documentation* PR# 988 *Subject: input for R-introFrom: "Paul E. Johnson" <pauljohn@ku.edu>Date: Mon, 18 Jun 2001 13:57:10 -0500* PR# 1011 *Subject: R-intro suggestions part IIFrom: "Paul E. Johnson" <pauljohn@ukans.edu>Date: Tue, 03 Jul 2001 15:50:06 -0500* PR# 1772 *Subject: bug(?) in R FAQ - Should I run R from within Emacs?From: Tim.Harrold@csiro.auDate: Thu, 11 Jul 2002 18:21:42 +1000Directory: Graphics* PR# 202 *Subject: persp box occlusion bugFrom: wsi@gcal.ac.ukDate: Wed, 2 Jun 1999 15:02:03 +0200 (MET DST)..The persp algorithm does not apply the occlusion rules to the frame,..which is always plotted first...A bug, but not very simple to fix.* PR# 660 *Subject: identify.default ignores any setting of cex.From: Prof Brian Ripley <ripley@stats.ox.ac.uk>Date: Fri, 15 Sep 2000 10:23:39 +0100 (BST)* PR# 776 *Subject: strwidth does not take font into accountFrom: Martyn Plummer <plummer@iarc.fr>Date: Tue, 19 Dec 2000 14:56:01 +0100 (CET)..This needs a substantial redesign.* PR# 791 *Subject: par(lab= *) / axis(*) bugFrom: maechler@stat.math.ethz.chDate: Fri, 22 Dec 2000 10:59:26 +0100* PR# 816 *Subject: dotplot: character size of labelsFrom: RINNER Heinrich <H.RINNER@TIROL.GV.AT>Date: Thu, 18 Jan 2001 14:54:32 +0100..Suggested fix is incorporated in 1.2.2.....There is a deeper problem: mtext() ignores par(cex=.5) in general...To see the problem try: par(cex=.5); mtext("hi")..Paul thinks the right fix is to change the argument list for mtext so that..cex=par(cex) by default rather than cex=NA by default (plus corresponding..internal changes to do_mtext in plot.c)...This needs to be done very carefully because (i) the change suggested above..mayhave side-effects in many other pieces of interpreted code..(ii) do_mtext ignores dd->gp.cexbase unlike, for example, do_plot_xy..and anything to do with cexbase needs extreme care.* PR# 831 *Subject: screen can't go back to (split) screen with log="y" plotFrom: Thomas Vogels <tov@ece.cmu.edu>Date: 30 Jan 2001 00:39:41 -0500..Still there. Suggested fix included in followups, but we didn't get around to..try it in time for 1.2.3.....Fix doesn't work. One problem is that the opar<-par();par(opar) idiom updates..xaxp before xlog, and the new value of xaxp may only be valid under the new..value of xlog.* PR# 837 *Subject: screen doesn't handle redrawing properlyFrom: Thomas Vogels <tov@ece.cmu.edu>Date: 01 Feb 2001 14:20:52 -0500* PR# 887 *Subject: axis(adj=anything) has no effectFrom: jhallman@frb.govDate: Wed, 28 Mar 2001 20:51:05 +0200 (MET DST)* PR# 943 *Subject: legend() with xpd=T; omission of initial plot characterFrom: John Maindonald <john.maindonald@anu.edu.au>Date: Sun, 20 May 2001 10:35:16 +1000* PR# 997 *Subject: las=1 with log axisFrom: Peter Dalgaard BSA <pd@pubhealth.ku.dk>Date: Wed, 27 Jun 2001 11:54:06 +0200* PR# 1045 *Subject: Palette changes on redrawFrom: Peter Dalgaard BSA <p.dalgaard@biostat.ku.dk>Date: 08 Aug 2001 19:08:01 +0200* PR# 1147 *Subject: postscript problemFrom: kjetil halvorsen <kjetilh@umsanet.edu.bo>Date: Fri, 26 Oct 2001 15:23:45 -0400..This seems to be a problem with screen/layout rather than postscript.* PR# 1161 *Subject: x-axis label in persp()From: Rolf Turner <rolf@maths.uwa.edu.au>Date: Wed, 7 Nov 2001 18:07:22 +0800 (WST)* PR# 1207 *Subject: boxplot labels incorrect when horizontal = TRUEFrom: Rashid Nassar <rnassar@duke.edu>Date: Sun, 9 Dec 2001 21:46:32 -0500 (EST)* PR# 1235 *Subject: Axes labelling with logarithmic scalesFrom: tobias.hoevekamp@ilw.agrl.ethz.chDate: Thu, 3 Jan 2002 15:29:02 +0100 (MET)* PR# 1300 *Subject: FW: layout and piechart diameter problemFrom: "Warnes, Gregory R" <gregory_r_warnes@groton.pfizer.com>Date: Thu, 7 Feb 2002 11:05:15 -0500* PR# 1395 *Subject: mgp parameter in par()From: mh.smith@niwa.cri.nzDate: Tue, 19 Mar 2002 06:11:49 +0100 (MET)* PR# 1476 *Subject: Bug: persp and colorsFrom: oliver.niggemann@acterna.comDate: Tue, 23 Apr 2002 09:41:37 +0200 (MET DST)* PR# 1505 *Subject: pictexFrom: luchini@ehess.cnrs-mrs.frDate: Thu, 2 May 2002 12:23:21 +0200 (MET DST)* PR# 1653 *Subject: coplot behaviourFrom: "RenE J.V. Bertin" <rjvbertin@hotmail.com>Date: Mon, 10 Jun 2002 20:11:02 +0200* PR# 1654 *Subject: R 1.5.0: axis() does not honor the xaxp argumentFrom: "Robert D. Merithew" <merithew@ccmr.cornell.edu>Date: Tue, 11 Jun 2002 09:29:39 -0400 (EDT)* PR# 1659 *Subject: mtext() alignment of perpendicular textFrom: p.murrell@auckland.ac.nzDate: Wed, 12 Jun 2002 13:29:45 +1200 (NZST)* PR# 1878 *Subject: close.screenFrom: Martin.Schlather@uni-bayreuth.deDate: Mon, 5 Aug 2002 22:35:02 +0200 (MET DST)* PR# 1933 *Subject: dev2eps() prints ticks with wrong length!From: Timur Elzhov <Timur.Elzhov@jinr.ru>Date: Fri, 23 Aug 2002 17:22:15 +0400..dev.copy problem* PR# 2069 *Subject: split.screen problemFrom: cbodily@att.netDate: Thu, 26 Sep 2002 19:37:40 +0200 (MET DST)* PR# 2283 *Subject: Wandering usr values in par(no.readonly=TRUW)From: Jari Oksanen <jarioksa@sun3.oulu.fi>Date: Tue, 12 Nov 2002 13:50:44 +0200Directory: In-Out* PR# 1688 *Subject: Maybe a problem in binary read/writeFrom: accot@free.frDate: Tue, 18 Jun 2002 22:51:17 +0200 (MET DST)..I don't think file() is said to work with devices!Directory: Installation* PR# 1222 *Subject: configure: sed: Function s%@PDFLATEX@%/usr/local/bin/pdflatex%gFrom: Peter Kleiweg <kleiweg@let.rug.nl>Date: Thu, 20 Dec 2001 14:09:42 +0100 (CET)..problem is on hppa2.0-hp-hpux10.20: may be HP-UX specific* PR# 1268 *Subject: Solaris 2.6 CompileFrom: gm81640@development.nssmb.comDate: Thu, 17 Jan 2002 06:28:26 +0100 (MET)..Most likely a compiler installation problem* PR# 1291 *Subject: Installation problem : SunOSFrom: brendan_mcmahon@prusec.comDate: Thu, 31 Jan 2002 18:00:55 +0100 (MET)..looks like gcc compiled under different OS version.* PR# 1500 *Subject: configure script fails on comment in tkConfig.shFrom: Peter Kleiweg <kleiweg@let.rug.nl>Date: Tue, 30 Apr 2002 16:41:51 +0200 (CEST)..Looks like a conspiracy between a shell problem and an oddity in Tk 8.0 rather..than an R problem. Good to know for the workaround though. The comment in..TK_XINCLUDES has since disappeared, at least in Tk 8.3.3.* PR# 1658 *Subject: make install fails - index.html not foundFrom: dhouston@bio.ri.ccf.orgDate: Tue, 11 Jun 2002 22:14:07 +0200 (MET DST)..Missing perl??* PR# 1676 *Subject: R configure.in makes bad alpha assumptionsFrom: mcmahill@mtl.mit.eduDate: Sat, 15 Jun 2002 19:21:09 -0400 (EDT)..Probably fixed in 1.5.1* PR# 1825 *Subject: bug in R-1.5.1 for Mac OS X installerFrom: Kow Kuroda <kkuroda@crl.ucsd.edu>Date: Mon, 22 Jul 2002 16:40:26 -0700..Darwin port* PR# 1829 *Subject: R config failure on solarisFrom: "Siva Ginjupalli" <gsivrao@hotmail.com>Date: Wed, 24 Jul 2002 20:08:49 +0000..Missing info on R version and compilers.Directory: Language* PR# 408 *Subject: convolution bugFrom: wsimpson@gcal.ac.ukDate: Fri, 28 Jan 2000 11:17:36 +0100 (MET)* PR# 412 *Subject: anomalies with call objectsFrom: Peter Dalgaard BSA <p.dalgaard@biostat.ku.dk>Date: 06 Feb 2000 01:18:50 +0100* PR# 669 *Subject: Bug(s) w/ rbind.data.frame(); fix also read.table(*, as.is = TRUE) ?From: Martin Maechler <maechler@stat.math.ethz.ch>Date: Mon, 25 Sep 2000 10:17:15 +0200..status of AsIs columns* PR# 1073 *Subject: Wierd problem comparing numeric values and list using ==From: "Warnes, Gregory R" <gregory_r_warnes@groton.pfizer.com>Date: Fri, 24 Aug 2001 22:07:41 -0400..see also PR#1075* PR# 1076 *Subject: Re: [Rd] Wierd problem comparing numeric values and list using ==From: John Chambers <jmc@research.bell-labs.com>Date: Mon, 27 Aug 2001 08:44:22 -0400..part of PR#1073* PR# 1186 *Subject: a patch to tapplyFrom: Vadim Ogranovich <vograno@arbitrade.com>Date: Thu, 29 Nov 2001 14:48:35 -0600* PR# 1214 *Subject: syntax questtion, maybe a bugFrom: Rich Heiberger <rmh@surfer.sbm.temple.edu>Date: Thu, 13 Dec 2001 13:46:54 -0500 (EST)..Is .2logl meant to be a valid name in R? It is S* PR# 1241 *Subject: Problem with "missing" in "local"From: J.C.Rougier@durham.ac.ukDate: Fri, 4 Jan 2002 13:34:34 GMT* PR# 1556 *Subject: lib.fixup, .GlobalEnv, and R1.5.0From: mark.bravington@csiro.auDate: Wed, 15 May 2002 08:30:50 +0200 (MET DST)Directory: Low-level* PR# 989 *Subject: "[.data.frame" allows un-named 3rd subscriptFrom: "Charles C. Berry" <cberry@tajo.ucsd.edu>Date: Mon, 18 Jun 2001 13:13:46 -0700 (PDT)* PR# 1068 *Subject: Interrupts (was Re: [Rd] X11 protocol errors ...)From: Luke Tierney <luke@nokomis.stat.umn.edu>Date: Wed, 22 Aug 2001 19:32:51 -0500..see also followup in PR#1069* PR# 1069 *Subject: Interrupts (was Re: [Rd] X11 protocol errors ...)From: "John W. Eaton" <jwe@bevo.che.wisc.edu>Date: Wed, 22 Aug 2001 21:56:33 -0500..part of PR#1068* PR# 1880 *Subject: You requested this reportFrom: Berwin Turlach <berwin@maths.uwa.edu.au>Date: Tue, 6 Aug 2002 16:57:54 +0800..The bug is that we get as far as mkCLOSXP before an error is reported* PR# 2253 *Subject: [R] CTRL-C suspends echo of shell (R versions 1.6.0 and 1.6.1)From: Wolfram Fischer - Z/I/M <wolfram@fischer-zim.ch>Date: Mon, 4 Nov 2002 10:18:48 +0100Directory: Macintosh* PR# 1819 *Subject: Date arithmetic failsFrom: RML27@cornell.eduDate: Sun, 21 Jul 2002 20:26:12 +0200 (MET DST)..In fact, as.POSIXct is off by 66 years. See.. http://developer.apple.com/qa/ops/ops23.html..This is semifixed, but timezones still don't work* PR# 1991 *Subject: Mac Save As... bugFrom: Tim Cole <tjc1@cam.ac.uk>Date: Sun, 8 Sep 2002 13:47:00 +0100* PR# 2276 *Subject: Mac specific - quartz leads to crashFrom: h95mr@mun.caDate: Fri, 8 Nov 2002 16:28:50 +0100 (MET)Directory: Misc* PR# 1126 *Subject: R-bug report www page whishlistFrom: jens.lund@nordea.comDate: Wed, 10 Oct 2001 18:24:29 +0200 (MET DST)* PR# 1158 *Subject: bug.report()sends empty messageFrom: Paul Gilbert <pgilbert@bank-banque-canada.ca>Date: Mon, 05 Nov 2001 10:05:27 -0500* PR# 1503 *Subject: R-GNOMEFrom: Patrick Gonin <gonin@genethon.fr>Date: Thu, 2 May 2002 09:29:07 +0200..1) is not a bug, as jpeg etc work. capabilities() has been changed for 1.5.1..2) system() needs a new version for GNOME.Directory: Models* PR# 1861 *Subject: update() can not find objectsFrom: yzhou@arcturusag.comDate: Thu, 1 Aug 2002 19:01:59 +0200 (MET DST)..The problem is actually deeper than this.....Sometime update() wants to evaluate arguments in the environment where the model..was defined, as here.....Sometimes it wants to use the current environment, eg this snippet from MASS..ph.fun <- function(data, i) {.. d <- data.. d$calls <- d$fitted + d$res[i].. coef(update(fit, data=d))..}Directory: StartupnoneDirectory: System-specific* PR# 848 *Subject: X11 device doesn't handle destroy events correclyFrom: Thomas Vogels <tov@ece.cmu.edu>Date: 13 Feb 2001 17:40:46 -0500* PR# 1020 *Subject: .Call and Mandrake 8.0From: lcottret@yahoo.frDate: Wed, 11 Jul 2001 15:34:23 +0200 (MET DST)..problem with symbol names only on Mandrake 8.0, not 7.2..needs reply to follow-up* PR# 1097 *Subject: R 1.3.1 fails 'make check' on arm in the Bessel exampleFrom: Dirk Eddelbuettel <edd@debian.org>Date: Thu, 20 Sep 2001 23:54:19 -0500..This platform turned out to have badly broken FPU behaviour. Given up, at..least for now .* PR# 1140 *Subject: Possible bug, Rprof() and scan(pipe())From: Don MacQueen <macq@llnl.gov>Date: Tue, 23 Oct 2001 13:50:26 -0700..MacOS X: Doesn't happen on Solaris or Linux* PR# 1261 *Subject: R_140 AND RHL_72 AND PackagesFrom: Patrick Gonin <gonin@genethon.fr>Date: Wed, 15 Jan 2003 13:25:17 +0100..Seems to relate to RH7.2 rpms* PR# 1272 *Subject: eigen segfault with GCC 3 on SolarisFrom: Paul Gilbert <pgilbert@bank-banque-canada.ca>Date: Thu, 17 Jan 2002 15:14:33 -0500..Seems to be a problem with g77 in gcc 3.0.2 on Solaris only...Probably a compiler bug* PR# 1275 *Subject: compile problem with bessel_i.c on IRIX64 flexor 6.5 10100655 IP35 (uname -a)From: Walter Tautz <wtautz@math.uwaterloo.ca>Date: Tue, 22 Jan 2002 10:05:20 -0500 (EST)* PR# 1289 *Subject: R 1.4.0 build fails on AIXFrom: lio@hpss1.ccs.ornl.govDate: Wed, 30 Jan 2002 14:10:30 +0100 (MET)* PR# 1316 *Subject: shared libraries on AIXFrom: lio@hpss1.ccs.ornl.govDate: Mon, 18 Feb 2002 18:53:41 +0100 (MET)* PR# 1461 *Subject: make check fails d-p-q-r-tests.R - OpenBSD 3.0From: Jason Turner <jasont@indigoindustrial.co.nz>Date: Mon, 15 Apr 2002 10:13:36 +0000* PR# 1606 *Subject: hitting ^C breaks readline historyFrom: Cyril Humbert <humbertc@univ-mlv.fr>Date: Tue, 28 May 2002 12:07:07 +0200 (MET DST)Directory: TooMuchAtOncenoneDirectory: Windows* PR# 1711 *Subject: GUI bugFrom: socrates@mail.ruDate: Thu, 27 Jun 2002 10:30:51 +0200 (MET DST)..A crash that is *very* hard to trigger (after several..minutes of continuous resizing)Directory: incoming* PR# 2461 *Subject: apropos() with partial nameFrom: John Maindonald <u9801539@leonard.anu.edu.au>Date: Thu, 16 Jan 2003 20:22:23 +1100 (EST)* PR# 2506 *Subject: printing of attributes does not dispatch on classSubject: [Rd] print.default and attributesFrom: ripley@stats.ox.ac.ukFrom: Mark.Bravington@csiro.auDate: Thu, 30 Jan 2003 09:52:48 +0000 (GMT)Date: Thu, 30 Jan 2003 16:15:14 +1100* PR# 2508 *Subject: *NEW***COPY ANY DVD TO CD****From: "Allen Platt" <Christopher945i45@yahoo.com>Date: Thu, 30 Jan 03 14:56:51 GMT