| Line 21... |
Line 21... |
| 21 |
id.n = 3, labels.id = names(residuals(x)), cex.id = 0.75,
|
21 |
id.n = 3, labels.id = names(residuals(x)), cex.id = 0.75,
|
| 22 |
qqline = TRUE, cook.levels = c(0.5, 1.0),
|
22 |
qqline = TRUE, cook.levels = c(0.5, 1.0),
|
| 23 |
cook.col = 8, cook.lty = 2, cook.legendChanges = list(),
|
23 |
cook.col = 8, cook.lty = 2, cook.legendChanges = list(),
|
| 24 |
add.smooth = getOption("add.smooth"),
|
24 |
add.smooth = getOption("add.smooth"),
|
| 25 |
iter.smooth = if(isGlm) 0 else 3,
|
25 |
iter.smooth = if(isGlm) 0 else 3,
|
| - |
|
26 |
panel.raw = points,
|
| 26 |
label.pos = c(4,2),
|
27 |
label.pos = c(4,2),
|
| 27 |
cex.caption = 1, cex.oma.main = 1.25
|
28 |
cex.caption = 1, cex.oma.main = 1.25,
|
| 28 |
, extend.ylim.f = 0.08
|
29 |
extend.ylim.f = 0.08
|
| 29 |
, panel.raw = points
|
- |
|
| 30 |
)
|
30 |
)
|
| 31 |
}
|
31 |
}
|
| 32 |
\arguments{
|
32 |
\arguments{
|
| 33 |
\item{x}{\code{lm} object, typically result of \code{\link{lm}} or
|
33 |
\item{x}{\code{lm} object, typically result of \code{\link{lm}} or
|
| 34 |
\code{\link{glm}}.}
|
34 |
\code{\link{glm}}.}
|
| Line 48... |
Line 48... |
| 48 |
6, the j-th entry corresponding to \code{which[j]}, see also the
|
48 |
6, the j-th entry corresponding to \code{which[j]}, see also the
|
| 49 |
default vector in \sQuote{Usage}. Can be set to
|
49 |
default vector in \sQuote{Usage}. Can be set to
|
| 50 |
\code{""} or \code{NA} to suppress all captions.
|
50 |
\code{""} or \code{NA} to suppress all captions.
|
| 51 |
}
|
51 |
}
|
| 52 |
\item{panel}{panel function for plotting points. This will by default
|
52 |
\item{panel}{panel function for plotting points. This will by default
|
| 53 |
add a smothing curve via
|
53 |
add a smoothing curve via
|
| 54 |
\code{\link{panel.smooth}}
|
54 |
\code{\link{panel.smooth}}
|
| 55 |
if \code{add.smooth = TRUE} and use \code{panel.raw} (which by
|
55 |
if \code{add.smooth = TRUE} and use \code{panel.raw} (which by
|
| 56 |
default is \code{\link{points}}) instead. For the residuals vs
|
56 |
default is \code{\link{points}}) otherwise. For the residuals vs
|
| 57 |
leverage plot, the smooth makes little sense and
|
57 |
leverage plot, the smooth makes little sense and
|
| 58 |
\code{panel.raw} is used.}
|
58 |
\code{panel.raw} is used.}
|
| 59 |
\item{sub.caption}{common title---above the figures if there are more
|
59 |
\item{sub.caption}{common title---above the figures if there are more
|
| 60 |
than one; used as \code{sub} (s.\code{\link{title}}) otherwise. If
|
60 |
than one; used as \code{sub} (s.\code{\link{title}}) otherwise. If
|
| 61 |
\code{NULL}, as by default, a possible abbreviated version of
|
61 |
\code{NULL}, as by default, a possible abbreviated version of
|
| Line 87... |
Line 87... |
| 87 |
\code{iter} in \code{\link{panel.smooth}()}; the default uses no such
|
87 |
\code{iter} in \code{\link{panel.smooth}()}; the default uses no such
|
| 88 |
iterations for \code{\link{glm}} fits which is
|
88 |
iterations for \code{\link{glm}} fits which is
|
| 89 |
particularly desirable for the (predominant) case of binary
|
89 |
particularly desirable for the (predominant) case of binary
|
| 90 |
observations, but also for other models where the response
|
90 |
observations, but also for other models where the response
|
| 91 |
distribution can be highly skewed.}
|
91 |
distribution can be highly skewed.}
|
| - |
|
92 |
\item{panel.raw}{a function to use for plots without a smoother.}
|
| 92 |
\item{label.pos}{positioning of labels, for the left half and right
|
93 |
\item{label.pos}{positioning of labels, for the left half and right
|
| 93 |
half of the graph respectively, for plots 1-3, 5, 6.}
|
94 |
half of the graph respectively, for plots 1-3, 5, 6.}
|
| 94 |
\item{cex.caption}{controls the size of \code{caption}.}
|
95 |
\item{cex.caption}{controls the size of \code{caption}.}
|
| 95 |
\item{cex.oma.main}{controls the size of the \code{sub.caption} only if
|
96 |
\item{cex.oma.main}{controls the size of the \code{sub.caption} only if
|
| 96 |
that is \emph{above} the figures when there is more than one.}
|
97 |
that is \emph{above} the figures when there is more than one.}
|
| 97 |
\item{extend.ylim.f}{a numeric vector of length 1 or 2, to be used in
|
98 |
\item{extend.ylim.f}{a numeric vector of length 1 or 2, to be used in
|
| 98 |
\code{ylim <- \link{extendrange}(r=ylim, f = *)}
|
99 |
\code{ylim <- \link{extendrange}(r=ylim, f = *)}
|
| 99 |
for plots \code{1} and \code{5} when \code{id.n} is non-empty.}
|
100 |
for plots \code{1} and \code{5} when \code{id.n} is non-empty.}
|
| 100 |
\item{panel.raw}{a function to use for plots without a smoother.}
|
- |
|
| 101 |
}
|
101 |
}
|
| 102 |
\description{
|
102 |
\description{
|
| 103 |
Six plots (selectable by \code{which}) are currently available: a plot
|
103 |
Six plots (selectable by \code{which}) are currently available: a plot
|
| 104 |
of residuals against fitted values, a Scale-Location plot of
|
104 |
of residuals against fitted values, a Scale-Location plot of
|
| 105 |
\eqn{\sqrt{| residuals |}}{sqrt(| residuals |)}
|
105 |
\eqn{\sqrt{| residuals |}}{sqrt(| residuals |)}
|
The R Project SVN
R