| Line 120... |
Line 120... |
| 120 |
\emph{inversions} or \emph{reversals} which are hard to interpret,
|
120 |
\emph{inversions} or \emph{reversals} which are hard to interpret,
|
| 121 |
but note the trichotomies in \bibcitet{R:Legendre+Legendre:2012}.
|
121 |
but note the trichotomies in \bibcitet{R:Legendre+Legendre:2012}.
|
| 122 |
|
122 |
|
| 123 |
Two different algorithms are found in the literature for Ward
|
123 |
Two different algorithms are found in the literature for Ward
|
| 124 |
clustering. The one used by option \code{"ward.D"} (equivalent to the
|
124 |
clustering. The one used by option \code{"ward.D"} (equivalent to the
|
| 125 |
only Ward option \code{"ward"} in \R versions \eqn{\le}{<=} 3.0.3)
|
125 |
only Ward option \code{"ward"} in \R versions \eqn{\le} 3.0.3)
|
| 126 |
\emph{does not} implement the clustering criterion of
|
126 |
\emph{does not} implement the clustering criterion of
|
| 127 |
\bibcitet{R:Ward:1963}, whereas option \code{"ward.D2"} implements
|
127 |
\bibcitet{R:Ward:1963}, whereas option \code{"ward.D2"} implements
|
| 128 |
that criterion \bibcitep{R:Murtagh+Legendre:2014}. With the latter, the
|
128 |
that criterion \bibcitep{R:Murtagh+Legendre:2014}. With the latter, the
|
| 129 |
dissimilarities are \emph{squared} before cluster updating, and the
|
129 |
dissimilarities are \emph{squared} before cluster updating, and the
|
| 130 |
clustering corresponds to \code{"ward.D"} with squared distances, see
|
130 |
clustering corresponds to \code{"ward.D"} with squared distances, see
|