| Line 1... |
Line 1... |
| 1 |
% File src/library/stats/man/SSfol.Rd
|
1 |
% File src/library/stats/man/SSfol.Rd
|
| 2 |
% Part of the R package, https://www.R-project.org
|
2 |
% Part of the R package, https://www.R-project.org
|
| 3 |
% Copyright 1995-2010 R Core Team
|
3 |
% Copyright 1995-2017 R Core Team
|
| 4 |
% Distributed under GPL 2 or later
|
4 |
% Distributed under GPL 2 or later
|
| 5 |
|
5 |
|
| 6 |
\name{SSfol}
|
6 |
\name{SSfol}
|
| 7 |
\encoding{UTF-8}
|
7 |
\encoding{UTF-8}
|
| 8 |
\title{Self-Starting Nls First-order Compartment Model}
|
8 |
\title{Self-Starting Nls First-order Compartment Model}
|
| Line 40... |
Line 40... |
| 40 |
\author{\enc{José}{Jose} Pinheiro and Douglas Bates}
|
40 |
\author{\enc{José}{Jose} Pinheiro and Douglas Bates}
|
| 41 |
\seealso{\code{\link{nls}}, \code{\link{selfStart}}
|
41 |
\seealso{\code{\link{nls}}, \code{\link{selfStart}}
|
| 42 |
}
|
42 |
}
|
| 43 |
\examples{
|
43 |
\examples{
|
| 44 |
Theoph.1 <- Theoph[ Theoph$Subject == 1, ]
|
44 |
Theoph.1 <- Theoph[ Theoph$Subject == 1, ]
|
| 45 |
SSfol(Theoph.1$Dose, Theoph.1$Time, -2.5, 0.5, -3) # response only
|
45 |
with(Theoph.1, SSfol(Dose, Time, -2.5, 0.5, -3)) # response only
|
| 46 |
lKe <- -2.5; lKa <- 0.5; lCl <- -3
|
46 |
with(Theoph.1, local({ lKe <- -2.5; lKa <- 0.5; lCl <- -3
|
| 47 |
SSfol(Theoph.1$Dose, Theoph.1$Time, lKe, lKa, lCl) # response and gradient
|
47 |
SSfol(Dose, Time, lKe, lKa, lCl) # response _and_ gradient
|
| - |
|
48 |
}))
|
| 48 |
getInitial(conc ~ SSfol(Dose, Time, lKe, lKa, lCl), data = Theoph.1)
|
49 |
getInitial(conc ~ SSfol(Dose, Time, lKe, lKa, lCl), data = Theoph.1)
|
| 49 |
## Initial values are in fact the converged values
|
50 |
## Initial values are in fact the converged values
|
| 50 |
fm1 <- nls(conc ~ SSfol(Dose, Time, lKe, lKa, lCl), data = Theoph.1)
|
51 |
fm1 <- nls(conc ~ SSfol(Dose, Time, lKe, lKa, lCl), data = Theoph.1)
|
| 51 |
summary(fm1)
|
52 |
summary(fm1)
|
| 52 |
}
|
- |
|
| - |
|
53 |
}%% TODO: visualize model parametrization as e.g. in ./SSasymp.Rd
|
| 53 |
\keyword{models}
|
54 |
\keyword{models}
|