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\name{GenericFunctions}
\alias{GenericFunctions}
\alias{isGeneric}
\alias{isGroup}
\alias{removeGeneric}
\alias{standardGeneric}
\alias{getGenerics}
\alias{allGenerics}
\alias{dumpMethod}
\alias{existsFunction}
\alias{findFunction}
\alias{dumpMethods}
\alias{removeMethods}
\alias{signature}
\alias{setReplaceMethod}
\alias{callGeneric}
\title{Tools for Managing Generic Functions}
\description{
  The functions documented here manage collections of methods associated
  with a generic function, as well as providing information about the
  generic functions themselves.
}
\synopsis{
isGeneric(f, where, fdef, getName = FALSE)
isGroup(f, where, fdef)
removeGeneric(f, where)
dumpMethod(f, signature, file, where, def)
existsFunction(f, generic = TRUE, where)
findFunction(f, generic=TRUE)
dumpMethods(f, file, signature, methods, where)
signature(\dots)
removeMethods(f, where)
setReplaceMethod(f, \dots)
getGenerics(where)
allGenerics(where)
callGeneric(\dots)
}
\usage{
isGeneric(f, where, fdef, getName = FALSE)

isGroup(f, where, fdef)

removeGeneric(f, where)

standardGeneric(f)

dumpMethod(f, signature, file, where, def)

existsFunction(f, generic = TRUE, where)

findFunction(f, generic=TRUE)

dumpMethods(f, file, signature, methods, where)

signature(\dots)

removeMethods(f, where)

setReplaceMethod(f, \dots)

getGenerics(where)

allGenerics(where)

callGeneric(\dots)

}
\section{Summary of Functions}{
  \describe{
    \item{\code{isGeneric}:}{ 
      Is there a function named \code{f}, and if so, is it a generic?

      The \code{getName} argument allows a function to find the name
      from a function definition.  If it is \code{TRUE} then the name of
      the generic is returned, or \code{FALSE} if this is not a generic
      function definition.

      The behavior of \code{isGeneric} and \code{\link{getGeneric}} for
      primitive functions is slightly different.  These functions don't
      exist as formal function objects (for efficiency and historical
      reasons), regardless of whether methods have been defined for
      them.  A call to \code{isGeneric} tells you whether methods have
      been defined for this primitive function, anywhere in the
      current search list, or in the specified position \code{where}.  In contrast,
      a call to \code{\link{getGeneric}} will return what the generic
      for that function would be, even if no methods have been currently
      defined for it.
    }
  
    \item{\code{removeGeneric}:}{ 
      Remove the generic function of this name.  
    }
    \item{\code{standardGeneric}:}{ 
      Dispatches a method from the current function call for the generic
      function \code{f}.
    }
    \item{\code{getMethods}:}{ 
      The list of methods for the specified generic.  
    }
    \item{\code{dumpMethod}:}{ 
      Dump the method for this generic function and signature.  
    }
    \item{\code{existsFunction}:}{ 
      Is there a function of this name.  If \code{generic} is
      \code{FALSE}, generic functions are not counted.
    }
    \item{\code{findFunction}:}{ 
      return all the elements of the search list on which a function
      definition for \code{name} exists.

      \emph{NOTE:} Use this rather than \code{\link{find}} with
      \code{mode="function"}, which is not as meaningful, and has a few
      subtle bugs from its use of regular expressions.
    }
    \item{\code{selectMethod}:}{ 
      Returns the method (a function) that R would use to evaluate a
      call to this generic, with arguments corresponding to the
      specified signature.

      \code{f} = the name of the generic function, \code{signature} is
      the signature of classes to match to the arguments of \code{f}.
    }
    \item{\code{dumpMethods}:}{ 
      Dump all the methods for this generic.  
    }
    \item{\code{signature}:}{ 
      Returns a named list of classes to be matched to arguments of a
      generic function.
    }
    \item{\code{callGeneric}:}{ 
      In the body of a method, this function will make a call to the
      current generic function.  If no arguments are passed to
      \code{callGeneric}, the arguments to the current call are passed
      down; otherwise, the arguments are interpreted as in a call to the
      generic function.
    }
  }
}

\arguments{
  \item{f}{ The character string naming the function. }
  \item{where}{ Where on the search list of attached packages to look
    for functions or methods.  By default, use the whole search list to
    find the relevant object(s).  }

  \item{signature}{ The class signature of the relevant method.  A
    signature is a named or unnamed vector of character strings.  If
    named, the names must be formal argument names for the generic
    function.  If \code{signature} is unnamed, the default is to use
    the first \code{length(signature)} formal arguments of the
    function. }
  
  \item{file}{ The file on which to dump method definitions. }

  \item{def}{ The function object defining the method; if omitted, the
    current method definition corresponding to the signature. }

  \item{\dots}{Named or unnamed arguments to form a signature.}

  \item{generic}{In testing or finding functions, should generic
    functions be included.  Supply as \code{FALSE} to get only
    non-generic functions.}

  \item{fdef}{Optional, the generic function definition.

   Usually omitted in calls to \code{isGeneric}}
  
  \item{getName}{If \code{TRUE}, \code{isGeneric} returns the name of
    the generic.  By default, it returns \code{TRUE}. }
  \item{methods}{
    The methods object containing the methods to be dumped.  By default,
    the methods defined for this generic (optionally on the specified
    \code{where} location).
  }
  
}

\section{Details}{
  \describe{
    \item{\code{setGeneric}:}{ 
      If there is already a non-generic function of this name, it will
      be used to define the generic unless \code{def} is supplied, and
      the current function will become the default method for the
      generic.

      If \code{def} is supplied, this defines the generic function, and
      no default method will exist (often a good feature, if the
      function should only be available for a meaningful subset of all
      objects).

      Arguments \code{group} and \code{valueClass} are retained for
      consistency with S-Plus, but are currently not used.
    }
    \item{\code{isGeneric}:}{ 
      If the \code{fdef} argument is supplied, take this as the
      definition of the generic, and test whether it is really a
      generic, with \code{f} as the name of the generic.  (This argument
      is not available in S-Plus.)
    }
    \item{\code{removeGeneric}:}{ 
      If \code{where} supplied, just remove the version on this element
      of the search list; otherwise, removes the first version
      encountered.
    }
    \item{\code{standardGeneric}:}{ 
      Generic functions should usually have a call to
      \code{standardGeneric} as their entire body.  They can, however,
      do any other computations as well.

      The usual \code{setGeneric} (directly or through calling
      \code{setMethod}) creates a function with a call to
      \code{standardGeneric}.
    }
    \item{\code{getMethods}:}{ 
      If the function is not a generic function, returns \code{NULL}.
      The \code{f} argument can be either the character string name of
      the generic or the object itself.

      The \code{where} argument optionally says where to look for the
      function, if \code{f} is given as the name.
    }
    \item{\code{dumpMethod}:}{ 
      The resulting source file will recreate the method.
    }
    \item{\code{findFunction}:}{ 
      If \code{generic} is \code{FALSE}, ignore generic functions.
    }
    \item{\code{selectMethod}:}{ 
      The vector of strings for the classes can be named or not.  If
      named, the names must match formal argument names of \code{f}.  If
      not named, the signature is assumed to apply to the arguments of
      \code{f} in order.

      If \code{mustFind} is \code{TRUE}, an error results if there is no
      method (or no unique method) corresponding to this signature.
      Otherwise may return \code{NULL} or a MethodsList object.
    }
    \item{\code{dumpMethods}:}{ 
      If \code{signature} is supplied only the methods matching this
      initial signature are dumped.  (This feature is not found in
      S-Plus:  don't use it if you want compatibility.)
    }
    \item{\code{signature}:}{ 
      The advantage of using \code{signature} is to provide a check on
      which arguments you meant, as well as clearer documentation in
      your method specification.  In addition, \code{signature} checks
      that each of the elements is a single character string.
    }
    \item{\code{removeMethods}:}{ 
      Returns \code{TRUE} if \code{f} was a generic function,
      \code{FALSE} (silently) otherwise.
  
      If there is a default method, the function will be re-assigned as
      a simple function with this definition; otherwise, it will be
      removed.  The assignment or removal can be controlled by optional
      argument \code{where}, which defaults to the first element of the
      search list having a function called \code{f}.
    }
  }
}
\references{
  The web page \url{http://www.omegahat.org/RSMethods/index.html} is the
  primary documentation.

  The functions in this package emulate the facility for classes and
  methods described in \emph{Programming with Data} (John M. Chambers,
  Springer, 1998).  See this book for further details and examples.
}
\author{
  John Chambers
}
\seealso{
  \code{\link{setGeneric}},
  \code{\link{setClass}},
  \code{\link{showMethods}}
}
\keyword{programming}
\keyword{classes}
\keyword{methods}