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46906 6467 d 5 h murdoch /branches/djm-parseRd/ Merge trunk changes to r46902  
/branches/djm-parseRd/src/gnuwin32/guicolors.h
/branches/djm-parseRd/src/scripts/BATCH.in
/branches/djm-parseRd/src/scripts/LINK.in
/branches/djm-parseRd/src/scripts/Rcmd.in
/branches/djm-parseRd/src/scripts/Rd2dvi.in
/branches/djm-parseRd/src/scripts/Rd2txt.in
/branches/djm-parseRd/src/scripts/Rdiff.in
/branches/djm-parseRd/src/scripts/Stangle.in
/branches/djm-parseRd/src/scripts/Sweave.in
/branches/djm-parseRd/src/scripts/config.in
/branches/djm-parseRd/src/scripts/f77_f2c.in
/branches/djm-parseRd/src/scripts/javareconf.in
/branches/djm-parseRd/src/scripts/mkinstalldirs.in
/branches/djm-parseRd/src/scripts/pager.in
/branches/djm-parseRd/src/scripts/BATCH
/branches/djm-parseRd/src/scripts/LINK
/branches/djm-parseRd/src/scripts/Rcmd
/branches/djm-parseRd/src/scripts/Rd2dvi
/branches/djm-parseRd/src/scripts/Rd2txt
/branches/djm-parseRd/src/scripts/Rdiff
/branches/djm-parseRd/src/scripts/Stangle
/branches/djm-parseRd/src/scripts/Sweave
/branches/djm-parseRd/src/scripts/config
/branches/djm-parseRd/src/scripts/f77_f2c
/branches/djm-parseRd/src/scripts/javareconf
/branches/djm-parseRd/src/scripts/mkinstalldirs
/branches/djm-parseRd/src/scripts/pager
/branches/djm-parseRd
/branches/djm-parseRd/Makeconf.in
/branches/djm-parseRd/Makefile.in
/branches/djm-parseRd/NEWS
/branches/djm-parseRd/configure
/branches/djm-parseRd/configure.ac
/branches/djm-parseRd/doc/manual/Makefile.in
/branches/djm-parseRd/doc/manual/R-FAQ.texi
/branches/djm-parseRd/doc/manual/R-admin.texi
/branches/djm-parseRd/doc/manual/R-data.texi
/branches/djm-parseRd/doc/manual/R-exts.texi
/branches/djm-parseRd/doc/manual/R-ints.texi
/branches/djm-parseRd/etc/Makeconf.in
/branches/djm-parseRd/etc/Renviron.in
/branches/djm-parseRd/etc/repositories
/branches/djm-parseRd/m4/R.m4
/branches/djm-parseRd/m4/gettext.m4
/branches/djm-parseRd/m4/java.m4
/branches/djm-parseRd/share/make/shlib.mk
/branches/djm-parseRd/share/sh/help-print.sh
/branches/djm-parseRd/src/appl/integrate.c
/branches/djm-parseRd/src/extra/graphapp/controls.c
/branches/djm-parseRd/src/extra/graphapp/dialogs.c
/branches/djm-parseRd/src/extra/graphapp/ga.h
/branches/djm-parseRd/src/extra/pcre/pcre_internal.h
/branches/djm-parseRd/src/extra/tzone/Notes
/branches/djm-parseRd/src/extra/tzone/localtime.c
/branches/djm-parseRd/src/extra/tzone/zoneinfo.zip
/branches/djm-parseRd/src/gnuwin32/CHANGES
/branches/djm-parseRd/src/gnuwin32/Makefile
/branches/djm-parseRd/src/gnuwin32/console.c
/branches/djm-parseRd/src/gnuwin32/console.h
/branches/djm-parseRd/src/gnuwin32/consolestructs.h
/branches/djm-parseRd/src/gnuwin32/dataentry.c
/branches/djm-parseRd/src/gnuwin32/editor.c
/branches/djm-parseRd/src/gnuwin32/editor.h
/branches/djm-parseRd/src/gnuwin32/extra.c
/branches/djm-parseRd/src/gnuwin32/fixed/bin/helpPRINT.bat
/branches/djm-parseRd/src/gnuwin32/fixed/etc/Makeconf
/branches/djm-parseRd/src/gnuwin32/fixed/etc/Rcmd_environ
/branches/djm-parseRd/src/gnuwin32/getline/wc_history.c
/branches/djm-parseRd/src/gnuwin32/getline/wc_history.h
/branches/djm-parseRd/src/gnuwin32/installer/JRins.pl
/branches/djm-parseRd/src/gnuwin32/installer/Makefile
/branches/djm-parseRd/src/gnuwin32/pager.c
/branches/djm-parseRd/src/gnuwin32/preferences.c
/branches/djm-parseRd/src/gnuwin32/preferences.h
/branches/djm-parseRd/src/gnuwin32/rui.c
/branches/djm-parseRd/src/gnuwin32/rw-FAQ.texi
/branches/djm-parseRd/src/gnuwin32/system.c
/branches/djm-parseRd/src/include/Makefile.win
/branches/djm-parseRd/src/include/R_ext/GraphicsDevice.h
/branches/djm-parseRd/src/include/config.h.in
/branches/djm-parseRd/src/library/base/R/as.R
/branches/djm-parseRd/src/library/base/R/attach.R
/branches/djm-parseRd/src/library/base/R/dataframe.R
/branches/djm-parseRd/src/library/base/R/dates.R
/branches/djm-parseRd/src/library/base/R/datetime.R
/branches/djm-parseRd/src/library/base/R/factor.R
/branches/djm-parseRd/src/library/base/R/library.R
/branches/djm-parseRd/src/library/base/R/solve.R
/branches/djm-parseRd/src/library/base/R/source.R
/branches/djm-parseRd/src/library/base/man/Encoding.Rd
/branches/djm-parseRd/src/library/base/man/EnvVar.Rd
/branches/djm-parseRd/src/library/base/man/Extract.Rd
/branches/djm-parseRd/src/library/base/man/Extract.data.frame.Rd
/branches/djm-parseRd/src/library/base/man/Quotes.Rd
/branches/djm-parseRd/src/library/base/man/Random.Rd
/branches/djm-parseRd/src/library/base/man/RdUtils.Rd
/branches/djm-parseRd/src/library/base/man/Round.Rd
/branches/djm-parseRd/src/library/base/man/Sys.getenv.Rd
/branches/djm-parseRd/src/library/base/man/Sys.setenv.Rd
/branches/djm-parseRd/src/library/base/man/all.Rd
/branches/djm-parseRd/src/library/base/man/all.equal.Rd
/branches/djm-parseRd/src/library/base/man/any.Rd
/branches/djm-parseRd/src/library/base/man/c.Rd
/branches/djm-parseRd/src/library/base/man/dynload.Rd
/branches/djm-parseRd/src/library/base/man/file.access.Rd
/branches/djm-parseRd/src/library/base/man/file.choose.Rd
/branches/djm-parseRd/src/library/base/man/iconv.Rd
/branches/djm-parseRd/src/library/base/man/isS4.Rd
/branches/djm-parseRd/src/library/base/man/library.dynam.Rd
/branches/djm-parseRd/src/library/base/man/list.Rd
/branches/djm-parseRd/src/library/base/man/locales.Rd
/branches/djm-parseRd/src/library/base/man/options.Rd
/branches/djm-parseRd/src/library/base/man/parse.Rd
/branches/djm-parseRd/src/library/base/man/polyroot.Rd
/branches/djm-parseRd/src/library/base/man/scan.Rd
/branches/djm-parseRd/src/library/base/man/slotOp.Rd
/branches/djm-parseRd/src/library/base/man/source.Rd
/branches/djm-parseRd/src/library/base/man/timezones.Rd
/branches/djm-parseRd/src/library/base/man/unlink.Rd
/branches/djm-parseRd/src/library/grDevices/R/postscript.R
/branches/djm-parseRd/src/library/grDevices/R/unix/dev2bitmap.R
/branches/djm-parseRd/src/library/grDevices/R/windows/dev2bitmap.R
/branches/djm-parseRd/src/library/grDevices/man/dev2bitmap.Rd
/branches/djm-parseRd/src/library/grDevices/man/pdf.Rd
/branches/djm-parseRd/src/library/grDevices/man/postscript.Rd
/branches/djm-parseRd/src/library/grDevices/src/Makefile.in
/branches/djm-parseRd/src/library/grDevices/src/devPS.c
/branches/djm-parseRd/src/library/grDevices/src/devWindows.c
/branches/djm-parseRd/src/library/graphics/NAMESPACE
/branches/djm-parseRd/src/library/graphics/R/boxplot.R
/branches/djm-parseRd/src/library/graphics/R/curve.R
/branches/djm-parseRd/src/library/graphics/R/layout.R
/branches/djm-parseRd/src/library/graphics/R/matplot.R
/branches/djm-parseRd/src/library/grid/NAMESPACE
/branches/djm-parseRd/src/library/grid/R/curve.R
/branches/djm-parseRd/src/library/grid/R/gpar.R
/branches/djm-parseRd/src/library/grid/R/grob.R
/branches/djm-parseRd/src/library/grid/inst/doc/changes.txt
/branches/djm-parseRd/src/library/grid/man/grid.grob.Rd
/branches/djm-parseRd/src/library/grid/man/grid.prompt.Rd
/branches/djm-parseRd/src/library/grid/src/Makefile.in
/branches/djm-parseRd/src/library/methods/R/packageName.R
/branches/djm-parseRd/src/library/methods/man/setOldClass.Rd
/branches/djm-parseRd/src/library/methods/src/Makefile.in
/branches/djm-parseRd/src/library/profile/Rprofile.unix
/branches/djm-parseRd/src/library/splines/src/Makefile.in
/branches/djm-parseRd/src/library/stats/R/StructTS.R
/branches/djm-parseRd/src/library/stats/R/acf.R
/branches/djm-parseRd/src/library/stats/R/add.R
/branches/djm-parseRd/src/library/stats/R/aggregate.R
/branches/djm-parseRd/src/library/stats/R/arima.R
/branches/djm-parseRd/src/library/stats/R/arma0.R
/branches/djm-parseRd/src/library/stats/R/biplot.R
/branches/djm-parseRd/src/library/stats/R/ecdf.R
/branches/djm-parseRd/src/library/stats/R/glm.R
/branches/djm-parseRd/src/library/stats/R/nls.R
/branches/djm-parseRd/src/library/stats/R/pairwise.R
/branches/djm-parseRd/src/library/stats/R/smspline.R
/branches/djm-parseRd/src/library/stats/R/splinefun.R
/branches/djm-parseRd/src/library/stats/R/ts.R
/branches/djm-parseRd/src/library/stats/man/TDist.Rd
/branches/djm-parseRd/src/library/stats/man/aggregate.Rd
/branches/djm-parseRd/src/library/stats/man/arima0.Rd
/branches/djm-parseRd/src/library/stats/man/box.test.Rd
/branches/djm-parseRd/src/library/stats/man/ecdf.Rd
/branches/djm-parseRd/src/library/stats/man/integrate.Rd
/branches/djm-parseRd/src/library/stats/man/numericDeriv.Rd
/branches/djm-parseRd/src/library/stats/man/qqnorm.Rd
/branches/djm-parseRd/src/library/stats/man/splinefun.Rd
/branches/djm-parseRd/src/library/stats/man/stepfun.Rd
/branches/djm-parseRd/src/library/stats/src/Makefile.in
/branches/djm-parseRd/src/library/stats/src/nls.c
/branches/djm-parseRd/src/library/stats4/R/mle.R
/branches/djm-parseRd/src/library/tcltk/man/tcltk-defunct.Rd
/branches/djm-parseRd/src/library/tcltk/src/Makefile.in
/branches/djm-parseRd/src/library/tools/R/QC.R
/branches/djm-parseRd/src/library/tools/R/pkgDepends.R
/branches/djm-parseRd/src/library/tools/R/utils.R
/branches/djm-parseRd/src/library/tools/man/texi2dvi.Rd
/branches/djm-parseRd/src/library/tools/src/Makefile.in
/branches/djm-parseRd/src/library/utils/NAMESPACE
/branches/djm-parseRd/src/library/utils/R/aqua/install.packages.R
/branches/djm-parseRd/src/library/utils/R/demo.R
/branches/djm-parseRd/src/library/utils/R/menu.R
/branches/djm-parseRd/src/library/utils/R/packages.R
/branches/djm-parseRd/src/library/utils/R/packages2.R
/branches/djm-parseRd/src/library/utils/R/str.R
/branches/djm-parseRd/src/library/utils/R/unix/help.R
/branches/djm-parseRd/src/library/utils/R/windows/help.R
/branches/djm-parseRd/src/library/utils/R/windows/sysutils.R
/branches/djm-parseRd/src/library/utils/R/zip.R
/branches/djm-parseRd/src/library/utils/inst/po/zh_CN/LC_MESSAGES/R-utils.mo
/branches/djm-parseRd/src/library/utils/man/Rscript.Rd
/branches/djm-parseRd/src/library/utils/man/help.Rd
/branches/djm-parseRd/src/library/utils/man/normalizePath.Rd
/branches/djm-parseRd/src/library/utils/man/packageDescription.Rd
/branches/djm-parseRd/src/library/utils/man/windows/memory.size.Rd
/branches/djm-parseRd/src/library/utils/man/zip.file.extract.Rd
/branches/djm-parseRd/src/library/utils/po/R-zh_CN.po
/branches/djm-parseRd/src/main/connections.c
/branches/djm-parseRd/src/main/gram.c
/branches/djm-parseRd/src/main/gram.y
/branches/djm-parseRd/src/main/memory.c
/branches/djm-parseRd/src/main/platform.c
/branches/djm-parseRd/src/main/source.c
/branches/djm-parseRd/src/main/sysutils.c
/branches/djm-parseRd/src/modules/X11/devX11.c
/branches/djm-parseRd/src/modules/X11/rbitmap.c
/branches/djm-parseRd/src/nmath/dnbinom.c
/branches/djm-parseRd/src/nmath/nmath.h
/branches/djm-parseRd/src/nmath/pnbeta.c
/branches/djm-parseRd/src/nmath/pnf.c
/branches/djm-parseRd/src/nmath/qnbeta.c
/branches/djm-parseRd/src/nmath/qnt.c
/branches/djm-parseRd/src/nmath/qt.c
/branches/djm-parseRd/src/scripts/COMPILE.in
/branches/djm-parseRd/src/scripts/INSTALL.in
/branches/djm-parseRd/src/scripts/Makefile.in
/branches/djm-parseRd/src/scripts/Makefile.win
/branches/djm-parseRd/src/scripts/R.sh.in
/branches/djm-parseRd/src/scripts/REMOVE.in
/branches/djm-parseRd/src/scripts/Rprof.in
/branches/djm-parseRd/src/scripts/SHLIB.in
/branches/djm-parseRd/src/scripts/build.in
/branches/djm-parseRd/src/scripts/check.in
/branches/djm-parseRd/src/unix/sys-std.c
/branches/djm-parseRd/tests/d-p-q-r-tests.R
/branches/djm-parseRd/tests/d-p-q-r-tests.Rout.save
/branches/djm-parseRd/tests/demos.Rout.save
/branches/djm-parseRd/tests/reg-plot-latin1.ps.save
/branches/djm-parseRd/tests/reg-plot.ps.save
/branches/djm-parseRd/tests/reg-tests-1.R
/branches/djm-parseRd/tests/reg-tests-2.R
/branches/djm-parseRd/tests/reg-tests-2.Rout.save
/branches/djm-parseRd/tests/simple-true.R
/branches/djm-parseRd/tests/simple-true.Rout.save
/branches/djm-parseRd/tools/GETCONFIG
/branches/djm-parseRd/tools/GETVERSION
/branches/djm-parseRd/tools/copy-if-change
/branches/djm-parseRd/tools/move-if-change
46832 6473 d 17 h ripley /trunk/ remove unnecessary executable properties
sort out use of mkinstalldirs		  
/trunk/src/scripts/mkinstalldirs.in
/trunk/src/scripts/mkinstalldirs
/trunk/Makeconf.in
/trunk/configure
/trunk/configure.ac
/trunk/src/library/grDevices/src/Makefile.in
/trunk/src/library/grid/src/Makefile.in
/trunk/src/library/methods/src/Makefile.in
/trunk/src/library/splines/src/Makefile.in
/trunk/src/library/stats/src/Makefile.in
/trunk/src/library/tcltk/src/Makefile.in
/trunk/src/library/tools/src/Makefile.in
/trunk/src/scripts/LINK.in
/trunk/src/scripts/Makefile.in
/trunk/src/scripts/R.sh.in
/trunk/src/scripts/Rcmd.in
/trunk/src/scripts/Rd2dvi.in
/trunk/src/scripts/Rd2txt.in
/trunk/src/scripts/Rdiff.in
/trunk/src/scripts/Rprof.in
/trunk/src/scripts/Stangle.in
/trunk/src/scripts/Sweave.in
/trunk/src/scripts/build.in
/trunk/src/scripts/check.in
/trunk/src/scripts/config.in
/trunk/src/scripts/f77_f2c.in
/trunk/src/scripts/javareconf.in
/trunk/src/scripts/pager.in
46821 6474 d 15 h ripley /trunk/ introduce R_SHELL to set the default shell  
/trunk/src/scripts/BATCH.in
/trunk/src/scripts/LINK.in
/trunk/src/scripts/Rcmd.in
/trunk/src/scripts/Rd2dvi.in
/trunk/src/scripts/Rd2txt.in
/trunk/src/scripts/Rdiff.in
/trunk/src/scripts/Stangle.in
/trunk/src/scripts/Sweave.in
/trunk/src/scripts/config.in
/trunk/src/scripts/f77_f2c.in
/trunk/src/scripts/javareconf.in
/trunk/src/scripts/pager.in
/trunk/src/scripts/BATCH
/trunk/src/scripts/LINK
/trunk/src/scripts/Rcmd
/trunk/src/scripts/Rd2dvi
/trunk/src/scripts/Rd2txt
/trunk/src/scripts/Rdiff
/trunk/src/scripts/Stangle
/trunk/src/scripts/Sweave
/trunk/src/scripts/config
/trunk/src/scripts/f77_f2c
/trunk/src/scripts/javareconf
/trunk/src/scripts/pager
/trunk/NEWS
/trunk/configure
/trunk/configure.ac
/trunk/doc/manual/R-admin.texi
/trunk/src/include/config.h.in
/trunk/src/scripts/COMPILE.in
/trunk/src/scripts/INSTALL.in
/trunk/src/scripts/Makefile.in
/trunk/src/scripts/R.sh.in
/trunk/src/scripts/REMOVE.in
/trunk/src/scripts/SHLIB.in
45264 6680 d 12 h ripley /trunk/src/ more merging of scripts  
/trunk/src/gnuwin32/fixed/bin/Rdiff.sh
/trunk/src/scripts/Rd2dvi
/trunk/src/scripts/Rdiff
43235 6853 d 19 h ripley /trunk/ make use of $SED if set  
/trunk/share/sh/help-print.sh
/trunk/src/scripts/INSTALL.in
/trunk/src/scripts/REMOVE.in
/trunk/src/scripts/Rd2dvi
/trunk/src/scripts/Rdiff
/trunk/src/scripts/SHLIB.in
/trunk/src/scripts/javareconf
40768 7097 d 6 h ripley /trunk/ improved Rdiff  
/trunk/NEWS
/trunk/src/scripts/Rdiff
39809 7202 d 16 h maechler /trunk/src/scripts/ don't show 'Package ..... loaded' lines (packages can show version no.!)  
/trunk/src/scripts/Rdiff
37820 7406 d 8 h urbaneks /trunk/src/scripts/ Make sed script in Rdiff POSIX compliant  
/trunk/src/scripts/Rdiff
37742 7411 d 10 h leisch /trunk/ further unification of startup message and R --version  
/trunk/NEWS
/trunk/src/main/version.c
/trunk/src/scripts/Rdiff
/trunk/tools/help2man.pl
37490 7447 d 10 h maechler /trunk/src/scripts/ do diff the '^Number of.*' parts !  
/trunk/src/scripts/Rdiff
32355 7881 d 16 h maechler /trunk/src/scripts/ also don't compare promise and pointer (hex codes)  
/trunk/src/scripts/Rdiff
32349 7882 d 5 h maechler /trunk/src/scripts/ make it work with nontrivial path-filenames  
/trunk/src/scripts/Rdiff
23041 8573 d 12 h ripley /trunk/src/scripts/ skip environments  
/trunk/src/scripts/Rdiff
22506 8611 d 4 h hornik /trunk/ Rewrite Rdiff to use '' rather than 'egrep' as POSIX 1003.1-2001
no longer requires this.
Rdiff should always be invoked via the R CMD interface.		  
/trunk/share/make/tests.mk
/trunk/src/scripts/Rdiff
/trunk/tests/Makefile.in
11741 9362 d 6 h hornik /trunk/ Adjust for preloading ctest by default.  
/trunk/src/scripts/Rdiff
/trunk/tests/print-tests.Rout.save
11550 9374 d 4 h hornik /trunk/ Use `${var-value}' form for providing default values.  
/trunk/doc/manual/Makefile.in
/trunk/etc/Renviron.in
/trunk/src/scripts/INSTALL.in
/trunk/src/scripts/Rd2dvi
/trunk/src/scripts/Rdiff
/trunk/tests/Examples/Makefile.in
/trunk/tools/GETSYMBOLS
11515 9375 d 13 h hornik /trunk/ Standardize version and usage messages.  
/trunk/share/perl/R/Utils.pm
/trunk/src/scripts/BATCH
/trunk/src/scripts/COMPILE.in
/trunk/src/scripts/INSTALL.in
/trunk/src/scripts/LINK
/trunk/src/scripts/REMOVE.in
/trunk/src/scripts/Rcmd
/trunk/src/scripts/Rd2dvi
/trunk/src/scripts/Rd2txt
/trunk/src/scripts/Rdconv.in
/trunk/src/scripts/Rdiff
/trunk/src/scripts/Rdindex.in
/trunk/src/scripts/Rprof.in
/trunk/src/scripts/SHLIB.in
/trunk/src/scripts/Sd2Rd.in
/trunk/src/scripts/build-help.in
/trunk/src/scripts/build.in
/trunk/src/scripts/check.in
11476 9377 d 11 h maechler /trunk/src/scripts/ fix for "sed -"  
/trunk/src/scripts/Rdiff
11384 9385 d 11 h hornik /trunk/src/scripts/ Don't have sed print twice.  
/trunk/src/scripts/Rdiff
11358 9386 d 3 h hornik /trunk/src/scripts/ Work harder at getting rid of R startup message.  
/trunk/src/scripts/Rdiff

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