R – /branches/R-glmscore/src/library/stats/NAMESPACE

Rev 55359 – R-glmscore experimental branch

pd — Thu, 07 Apr 2011 10:39:44 +0000

pd – 1 file(s) modified
R-glmscore experimental branch

+ /branches/R-glmscore (copied from /trunk@55358)

Rev 54602 – AIC needs a logLik.logLik method

ripley — Sat, 26 Feb 2011 11:57:10 +0000

ripley – 2 file(s) modified
AIC needs a logLik.logLik method

~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/logLik.R

Rev 54595 – migrate S3 generic for BIC to stats

ripley — Sat, 26 Feb 2011 07:51:21 +0000

ripley – 5 file(s) modified
migrate S3 generic for BIC to stats

~ /trunk/src/library/stats/man/AIC.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/AIC.R
~ /trunk/src/library/stats4/NAMESPACE
~ /trunk/src/library/stats4/R/BIC.R

Rev 54582 – rollback until nlme is updated

ripley — Fri, 25 Feb 2011 07:32:00 +0000

ripley – 5 file(s) modified
rollback until nlme is updated

~ /trunk/src/library/stats/man/AIC.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/AIC.R
~ /trunk/src/library/stats4/NAMESPACE
~ /trunk/src/library/stats4/R/BIC.R

Rev 54581 – prepare to port some bug fixes to 2.12.2 patched

ripley — Fri, 25 Feb 2011 07:30:44 +0000

ripley – 6 file(s) modified
prepare to port some bug fixes to 2.12.2 patched

~ /trunk/doc/NEWS.Rd
~ /trunk/src/library/stats/man/AIC.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/AIC.R
~ /trunk/src/library/stats4/NAMESPACE
~ /trunk/src/library/stats4/R/BIC.R

Rev 54562 – add nobs() generic. fix up several problems with logLik() methods ...

ripley — Wed, 23 Feb 2011 11:59:55 +0000

ripley – 10 file(s) modified
add nobs() generic.
fix up several problems with logLik() methods and BIC's logLik method

~ /trunk/doc/NEWS.Rd
~ /trunk/src/library/stats/man/AIC.Rd
+ /trunk/src/library/stats/man/nobs.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/logLik.R
~ /trunk/src/library/stats/R/nls.R
~ /trunk/src/library/stats4/man/BIC.Rd
~ /trunk/src/library/stats4/NAMESPACE
~ /trunk/src/library/stats4/R/BIC.R
~ /trunk/tests/Examples/stats4-Ex.Rout.save

Rev 54556 – temporarily revert accidental commit

ripley — Wed, 23 Feb 2011 10:28:59 +0000

ripley – 5 file(s) modified
temporarily revert accidental commit

~ /trunk/src/library/stats/man/AIC.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/logLik.R
~ /trunk/src/library/stats4/NAMESPACE
~ /trunk/src/library/stats4/R/BIC.R

Rev 54555 – clean up now Windows has been separated

ripley — Wed, 23 Feb 2011 10:27:25 +0000

ripley – 6 file(s) modified
clean up now Windows has been separated

~ /trunk/src/library/stats/man/AIC.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/logLik.R
~ /trunk/src/library/stats4/NAMESPACE
~ /trunk/src/library/stats4/R/BIC.R
~ /trunk/src/main/platform.c

Rev 53892 – merge() and as.hclust() methods for "dendrogam"s

maechler — Thu, 30 Dec 2010 22:13:15 +0000

maechler – 8 file(s) modified
merge() and as.hclust() methods for "dendrogam"s

~ /trunk/doc/NEWS.Rd
~ /trunk/src/library/stats/man/dendrogram.Rd
~ /trunk/src/library/stats/man/order.dendrogram.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/dendrogram.R
~ /trunk/tests/demos.Rout.save
~ /trunk/tests/Examples/stats-Ex.Rout.save
~ /trunk/tests/reg-tests-2.Rout.save

Rev 52875 – using qr.lm() with simple NULL check

maechler — Tue, 07 Sep 2010 09:40:25 +0000

maechler – 6 file(s) modified
using qr.lm() with simple NULL check

~ /trunk/doc/NEWS.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/aov.R
~ /trunk/src/library/stats/R/glm.R
~ /trunk/src/library/stats/R/lm.influence.R
~ /trunk/src/library/stats/R/lm.R

Rev 51052 – Add aggregate formula method. Improve performance of aggregate.data.frame() for sparse ...

hornik — Wed, 27 Jan 2010 13:10:50 +0000

hornik – 4 file(s) modified
Add aggregate formula method.
Improve performance of aggregate.data.frame() for sparse contingency
tables of the cross-classifying factors.

~ /trunk/NEWS
~ /trunk/src/library/stats/man/aggregate.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/aggregate.R

Rev 50603 – add quantile.POSIXt

ripley — Sun, 29 Nov 2009 13:37:17 +0000

ripley – 5 file(s) modified
add quantile.POSIXt

~ /trunk/NEWS
~ /trunk/src/library/base/R/datetime.R
~ /trunk/src/library/stats/man/quantile.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/quantile.R

Rev 50596 – more tweaks to weighted.mean

ripley — Sat, 28 Nov 2009 15:01:10 +0000

ripley – 5 file(s) modified
more tweaks to weighted.mean

~ /trunk/NEWS
~ /trunk/src/library/stats/man/weighted.mean.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/weighted.mean.R
~ /trunk/tests/reg-tests-1.R

Rev 48885 – replace reorder.factor and reorder.character by more general reorder.default

deepayan — Wed, 01 Jul 2009 20:01:39 +0000

deepayan – 4 file(s) modified
replace reorder.factor and reorder.character by more general reorder.default

~ /trunk/NEWS
~ /trunk/src/library/stats/man/reorder.factor.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/reorder.factor.R

Rev 48653 – fulfil wish of PR13505

ripley — Wed, 27 May 2009 15:12:15 +0000

ripley – 5 file(s) modified
fulfil wish of PR13505

~ /trunk/NEWS
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/proj.R
~ /trunk/tests/reg-tests-3.R
~ /trunk/tests/reg-tests-3.Rout.save

Rev 48644 – make weighted.mean generic

ripley — Wed, 27 May 2009 11:55:52 +0000

ripley – 4 file(s) modified
make weighted.mean generic

~ /trunk/NEWS
~ /trunk/src/library/stats/man/weighted.mean.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/weighted.mean.R

Rev 46543 – add montone Hermite "spline" interpolation

maechler — Thu, 18 Sep 2008 06:35:07 +0000

maechler – 4 file(s) modified
add montone Hermite "spline" interpolation

~ /trunk/NEWS
~ /trunk/src/library/stats/man/splinefun.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/splinefun.R

Rev 46112 – separate out print method for summary.ecdf

ripley — Wed, 23 Jul 2008 16:28:55 +0000

ripley – 4 file(s) modified
separate out print method for summary.ecdf

~ /trunk/NEWS
~ /trunk/src/library/stats/man/ecdf.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/ecdf.R

Rev 45800 – added reorder.character() similar to reorder.factor()

deepayan — Tue, 27 May 2008 22:30:55 +0000

deepayan – 4 file(s) modified
added reorder.character() similar to reorder.factor()

~ /trunk/NEWS
~ /trunk/src/library/stats/man/reorder.factor.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/reorder.factor.R

Rev 44648 – S3method lines.isoreg()

maechler — Sat, 01 Mar 2008 17:06:07 +0000

maechler – 1 file(s) modified
S3method lines.isoreg()

~ /trunk/src/library/stats/NAMESPACE

Rev 41573 – migrate gls/lme vcov methods to nlme (in 3.1-81)

ripley — Tue, 15 May 2007 08:58:40 +0000

ripley – 4 file(s) modified
migrate gls/lme vcov methods to nlme (in 3.1-81)

~ /trunk/NEWS
~ /trunk/src/library/stats/man/vcov.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/vcov.R

Rev 40852 – screeplot (S3)generic & default method

maechler — Sat, 17 Mar 2007 19:31:06 +0000

maechler – 6 file(s) modified
screeplot (S3)generic & default method

~ /trunk/NEWS
~ /trunk/src/library/stats/man/prcomp.Rd
~ /trunk/src/library/stats/man/screeplot.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/prcomp.R
~ /trunk/src/library/stats/R/princomp-add.R

Rev 40817 – fixing a buglet that crept in from the change to ...

rgentlem — Tue, 06 Mar 2007 16:03:50 +0000

rgentlem – 2 file(s) modified
fixing a buglet that crept in from the change to have $ warn
when applied to an atomic vector

~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/models.R

Rev 40440 – add get_all_vars

ripley — Thu, 11 Jan 2007 03:24:07 +0000

ripley – 4 file(s) modified
add get_all_vars

~ /trunk/NEWS
~ /trunk/src/library/stats/man/model.frame.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/models.R

Rev 39170 – tweaks

ripley — Thu, 07 Sep 2006 15:06:41 +0000

ripley – 2 file(s) modified
tweaks

~ /trunk/src/library/base/R/methodsSupport.R
~ /trunk/src/library/stats/NAMESPACE

Rev 39137 – temporarily export median.default for package 'rv'

ripley — Wed, 06 Sep 2006 06:59:46 +0000

ripley – 1 file(s) modified
temporarily export median.default for package 'rv'

~ /trunk/src/library/stats/NAMESPACE

Rev 39116 – make median S3-generic improve detection of undeclared methods-using packages

ripley — Tue, 05 Sep 2006 10:44:15 +0000

ripley – 7 file(s) modified
make median S3-generic
improve detection of undeclared methods-using packages

~ /trunk/doc/manual/R-exts.texi
~ /trunk/NEWS
~ /trunk/src/library/base/man/sort.Rd
~ /trunk/src/library/stats/man/median.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/median.R
~ /trunk/src/library/tools/R/QC.R

Rev 39002 – migrate r2dtable to package stats

ripley — Tue, 29 Aug 2006 08:15:09 +0000

ripley – 10 file(s) modified
migrate r2dtable to package stats

~ /trunk/NEWS
x /trunk/src/library/base/man/r2dtable.Rd
~ /trunk/src/library/base/R/table.R
+ /trunk/src/library/stats/man/r2dtable.Rd (copied from /trunk/src/library/base/man/r2dtable.Rd@38998)
~ /trunk/src/library/stats/NAMESPACE
+ /trunk/src/library/stats/R/r2dtable.R
~ /trunk/src/library/stats/src/init.c
~ /trunk/src/main/basedecl.h
~ /trunk/src/main/random.c
~ /trunk/src/main/registration.c

Rev 38956 – do_bind was not using R_LookupMethod and hence missing registered methods

ripley — Tue, 22 Aug 2006 20:12:45 +0000

ripley – 4 file(s) modified
do_bind was not using R_LookupMethod and hence missing registered methods

~ /trunk/NEWS
~ /trunk/src/include/Defn.h
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/main/bind.c

Rev 38910 – factor out format.ftable() from write.ftable

maechler — Thu, 17 Aug 2006 12:35:58 +0000

maechler – 7 file(s) modified
factor out format.ftable() from write.ftable

~ /trunk/NEWS
~ /trunk/src/library/stats/man/read.ftable.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/ftable.R
~ /trunk/src/library/utils/man/head.Rd
~ /trunk/src/library/utils/NAMESPACE
~ /trunk/src/library/utils/R/head.R

Rev 38242 – add [<-.ts

ripley — Wed, 31 May 2006 16:24:46 +0000

ripley – 5 file(s) modified
add [<-.ts

~ /trunk/NEWS
~ /trunk/src/library/stats/man/ts.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/ts.R
~ /trunk/tests/reg-tests-1.R

Rev 38104 – add an as.data.frame method for ftable

ripley — Thu, 18 May 2006 07:23:51 +0000

ripley – 5 file(s) modified
add an as.data.frame method for ftable

~ /trunk/NEWS
~ /trunk/src/library/stats/man/ftable.Rd
~ /trunk/src/library/stats/man/read.ftable.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/ftable.R

Rev 37215 – take profiler() internal

ripley — Tue, 31 Jan 2006 10:20:35 +0000

ripley – 4 file(s) modified
take profiler() internal

~ /trunk/src/library/stats/man/nls.Rd
~ /trunk/src/library/stats/man/profile.nls.Rd
x /trunk/src/library/stats/man/profiler.Rd
~ /trunk/src/library/stats/NAMESPACE

Rev 37159 – no longer export nlsModel, since it is intimately connected to ...

ripley — Tue, 24 Jan 2006 15:29:48 +0000

ripley – 4 file(s) modified
no longer export nlsModel, since it is intimately connected to nls internals
and so has had to changed considerably to support algorithm="port"

~ /trunk/NEWS
~ /trunk/src/library/stats/man/nls.Rd
x /trunk/src/library/stats/man/nlsModel.Rd
~ /trunk/src/library/stats/NAMESPACE

Rev 36918 – Support in useDynLib() for a prefix and postfix via the ...

duncan — Fri, 30 Dec 2005 08:39:29 +0000

duncan – 38 file(s) modified
Support in useDynLib() for a prefix and postfix via the .fixes
argument. Reorganization of the computations for mapping native
symbols in name space so more of it happens when the NAMESPACE file is
parsed, i.e. at installation. And changed several of the base packages
to use this registration approach. stats still has some of the
original name/PACKAGE. This allows us to test both mechanisms. stats
also uses the prefix. Will add documentation for new functions in
base later or move them into the parseNamespace() function. If we use
the .registration in grDevices, we get a warning on Windows about
savePlot being an existing R variable. This is legitimate, so we
explicitly enumerate the symbols. We will have to add an .omit
argument to useDynLib() or use a different prefix or explicitly map
all symbols. Or we can use additional useDynLib directives in the
conditional statements.

~ /trunk/src/library/base/R/namespace.R
~ /trunk/src/library/grDevices/NAMESPACE
~ /trunk/src/library/grDevices/R/calc.R
~ /trunk/src/library/grDevices/R/pictex.R
~ /trunk/src/library/grDevices/R/postscript.R
~ /trunk/src/library/grid/NAMESPACE
~ /trunk/src/library/grid/R/grab.R
~ /trunk/src/library/grid/R/grid.R
~ /trunk/src/library/grid/R/unit.R
~ /trunk/src/library/grid/R/util.R
~ /trunk/src/library/grid/R/zzz.R
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/acf.R
~ /trunk/src/library/stats/R/ansari.test.R
~ /trunk/src/library/stats/R/ar.burg.mts.R
~ /trunk/src/library/stats/R/ar.burg.R
~ /trunk/src/library/stats/R/ar.R
~ /trunk/src/library/stats/R/ar.yw.mts.R
~ /trunk/src/library/stats/R/arima.R
~ /trunk/src/library/stats/R/arma0.R
~ /trunk/src/library/stats/R/ARMAtheory.R
~ /trunk/src/library/stats/R/bandwidths.R
~ /trunk/src/library/stats/R/chisq.test.R
~ /trunk/src/library/stats/R/cmdscale.R
~ /trunk/src/library/stats/R/loess.R
~ /trunk/src/library/stats/R/mantelhaen.test.R
~ /trunk/src/library/stats/R/nlminb.R
~ /trunk/src/library/stats/R/nls-profile.R
~ /trunk/src/library/stats/R/nls.R
~ /trunk/src/library/stats/R/ppr.R
~ /trunk/src/library/stats/R/runmed.R
~ /trunk/src/library/stats/R/shapiro.test.R
~ /trunk/src/library/stats/R/smspline.R
~ /trunk/src/library/stats/R/stl.R
~ /trunk/src/library/stats/R/StructTS.R
~ /trunk/src/library/tools/NAMESPACE
~ /trunk/src/library/tools/R/md5.R
~ /trunk/src/library/tools/R/utils.R

Rev 36859 – more twweaks to nls, including getting df.residual right with zero ...

ripley — Mon, 26 Dec 2005 08:42:48 +0000

ripley – 6 file(s) modified
more twweaks to nls, including getting df.residual right with zero weights

~ /trunk/NEWS
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/nls-profile.R
~ /trunk/src/library/stats/R/nls.R
~ /trunk/src/library/stats/tests/nls.R
~ /trunk/src/library/stats/tests/nls.Rout.save

Rev 36610 – Fixup misspelled mauchly.test (port to r-patched eventually)

pd — Mon, 05 Dec 2005 00:50:32 +0000

pd – 6 file(s) modified
Fixup misspelled mauchly.test (port to r-patched eventually)

~ /trunk/NEWS
x /trunk/src/library/stats/man/mauchley.test.Rd
+ /trunk/src/library/stats/man/mauchly.test.Rd
+ /trunk/src/library/stats/man/stats-deprecated.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/mlm.R

Rev 35467 – S3 generic "simulate" and method for lm class

bates — Wed, 31 Aug 2005 18:04:02 +0000

bates – 5 file(s) modified
S3 generic "simulate" and method for lm class

~ /trunk/NEWS
+ /trunk/src/library/stats/man/simulate.Rd
~ /trunk/src/library/stats/NAMESPACE
~ /trunk/src/library/stats/R/lm.R
~ /trunk/src/library/stats/R/models.R

Rev 35419 – move iconv from utils to base (as it is used ...

ripley — Fri, 26 Aug 2005 08:34:29 +0000

ripley – 17 file(s) modified
move iconv from utils to base (as it is used in tools etc).
split up Defunct.R into parts appropriate to current packages.
use methods::as in read.table.

~ /trunk/NEWS
~ /trunk/src/library/base/man/base-defunct.Rd
+ /trunk/src/library/base/man/iconv.Rd (copied from /trunk/src/library/utils/man/iconv.Rd@35416)
~ /trunk/src/library/base/R/Defunct.R
~ /trunk/src/library/base/R/New-Internal.R
~ /trunk/src/library/base/R/readtable.R
+ /trunk/src/library/graphics/man/graphics-defunct.Rd
~ /trunk/src/library/graphics/NAMESPACE
~ /trunk/src/library/graphics/R/zzz.R
~ /trunk/src/library/stats/NAMESPACE
+ /trunk/src/library/stats/R/stats-defunct.R
~ /trunk/src/library/tools/R/packageshtml.R
~ /trunk/src/library/tools/R/QC.R
~ /trunk/src/library/tools/R/Rd.R
x /trunk/src/library/utils/man/iconv.Rd
~ /trunk/src/library/utils/NAMESPACE
~ /trunk/src/library/utils/R/iconv.R

Rev 34497 – Added nlminb and supporting source files

bates — Sat, 28 May 2005 18:13:07 +0000

bates – 10 file(s) modified
Added nlminb and supporting source files

~ /trunk/src/library/stats/COPYRIGHTS.modreg
+ /trunk/src/library/stats/COPYRIGHTS.portsrc
+ /trunk/src/library/stats/man/nlminb.Rd
~ /trunk/src/library/stats/NAMESPACE
+ /trunk/src/library/stats/R/nlminb.R
~ /trunk/src/library/stats/src/init.c
~ /trunk/src/library/stats/src/Makefile.in
+ /trunk/src/library/stats/src/port.c
+ /trunk/src/library/stats/src/port.h
+ /trunk/src/library/stats/src/portsrc.f