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\SweaveOpts{keep.source=TRUE}Now a chunk starting with a comment, lost in R 2.12.0 patched:<<ex>>=## This is an initial comment line. Let's hope it's not being lost"Above there's a comment."1:10 # a comment here is preservedpi # also, there's one the next (last) line - which used to get lost## and a last comment here ... lost also in earlier R versions@and some more text.