The R Project SVN R-packages

SModeNames <-
c("name", "string", "literal", "compiled", "(", ")", "[", "]",
"{", "}", ",", "=", "!", ":", "addop", "*/", "<dummy>", "^",
"-", "$", "logop", "&|", "<-", "->", "sp.op", " ", "repeat",
"if", "else", "break", ";", "next", "while", "for", "in", "recursive.return",
"return", "argument", "system", "end.of.file", "expression",
"system.function", "missing", "call", "function", "?", "unbalanced",
"[[", "unknown", "]]", "quit", "continue", "comment.expression",
"vector", "call(...)", "<<-", "graphics", "arg.lvalue", "internal",
"S.call", "S.data", "comment", "comment(leftover)",
"evaluation.frame", "destination")

nam.or.i <- function(nam, i) if (nam != "") nam else i

read.S <- function (file)
{
    endian <- .Platform$endian
    s <- file(file, open = "rb")
    on.exit(close(s))

    readheader <- function(s)
    {
    head <- readBin(s, "int", 8, 1)
    all(head == c(0, 83, 32, 100, 97, 116, 97, 1))
    }

    ReadSObj <- function (code, len)
    {
    if (code == 1)
        result <- as.logical(readBin(s, "int", len, endian = endian))
    else if (code == 2)
        result <- readBin(s, "int", len, endian = endian)
    else if (code == 3)
        result <- readBin(s, "numeric", len, size=4, endian = endian)
    else if (code == 4)
        result <- readBin(s, "numeric", len, endian = endian)
    else if (code == 5) {
        charsize <- readBin(s, "int", endian = endian)
        newpos <- charsize + seek(s, NA)
        result <- readBin(s, "character", len)
        seek(s, newpos)
    }
    else if (code == 6) {
        result <- list()
        if (len > 0) {
        names <- ReadSObj(5, len)
        codes <- ReadSObj(2, len)
        lens <- ReadSObj(2, len)
        offsets <- ReadSObj(2, len)
        for (i in 1:len) {
            seek(s, offsets[i])
                    temp <-
                        if (codes[i] > 0)
                            ReadSObj(codes[i], lens[i]) else as.name(names[i])
                    result[[nam.or.i(names[i], i)]] <- temp
        }
        }
    }
    else if (code == 7)
        result <- readBin(s, "complex", len, endian = endian)
    else if (code == 21) {
        temp <- ReadSObj(6, len)
        result <- temp[[".Data"]]
        attributes(result) <-
        temp[-match(c(".Data", ".Dim", ".Dimnames", ".Label"),
                names(temp), nomatch = 0)]
        dim(result) <- temp[[".Dim"]]
        names(result) <- names(temp[[".Data"]])
        if (!is.null(temp[[".Label"]]))
        levels(result) <- temp[[".Label"]]
        if (!is.null(temp[[".Dimnames"]]))
        dimnames(result) <- temp[[".Dimnames"]]
    }
    else if (code %in% 257:321) {
        code <- SModeNames[code - 256]
        if (code %in% c("name", "missing"))
        result <- ReadSObj(5, len)
        else
        result <- ReadSObj(6, len)
        if (code == "function")
        try(result <- as.function(result, env=.GlobalEnv))
        else if (code %in% c("break", "if", "for", "return", "S.call",
                 "while", "<-", "<<-", "(", "{"))
        result <- as.call(c(as.name(code),result))
        else if (code == "call(...)")# these aren't special in R
        result <- result[[1]]
        else if (code == "comment") # ignore comments
        result <- NULL
        else if (code == "comment.expression")# just keep the expression, not the comment
        result <- result[unlist(lapply(result,function(y) !is.null(y)))][[1]]
        else if (code == "internal")
        result <- as.call(list(as.name(".Internal"), result[[1]]))
        else if (code == "missing")
        result <- call("stop", "Argument is missing")
        else try(mode(result) <- code)
    }
    else {
        return(paste("Unrecognized S mode", code, "not supported"))
    }
    result
    }
    if(readheader(s)) {
    code <- readBin(s, "int", endian = endian)
    if (code < 0 | code > 65535) {
        endian <- switch(endian, big = "little", little = "big")
        seek(s,  seek(s, NA) -4)
        code <- readBin(s, "int", endian = endian)
        if (code < 0 | code > 65535)
        stop("internal error - illegal S code value")
    }
    len <- readBin(s, "int", endian = endian)
    return(ReadSObj(code, len))
    }
    else stop("not an S object")
}

data.restore <-
    function (file, print = FALSE, verbose = FALSE, env = .GlobalEnv)
{
    dump <- file(file, open="rt")
    on.exit(close(dump))

    ReadSdump <- function(top = FALSE, prefix) {
    name <- readLines(dump, 1)
    if(length(name) == 0) return(NULL)
    code <- readLines(dump, 1)
    len <- as.integer(readLines(dump, 1))
    if (top && print)
        cat("\"", name, "\": ", code, "\n", sep="")
    if (verbose)
        cat(prefix, summary(dump)$position, name, code, len, "\n")
        ## first decide between atomic and "the rest"
    if (code %in% c("logical", "numeric","integer","single","double",
            "character", "name", "missing", "complex")) {
        value <- readLines(dump, len)
        value[value == "N"] <- as.character(NA)
        if (code != "character")
        value <-
            if (code == "logical")# "0", "1" and <NA> :
            as.logical(as.integer(value))
            else if (code %in% c("integer", "double", "name", "complex"))
            methods::as(value, code)
            else if (code %in% c("numeric","single"))
            as.numeric(value)
            else if (code == "missing")
            ## Workaround:  should be value <- as.name("")
            call("stop",
                 paste("Argument ", sQuote(name), " is missing",
                                   sep=""))
    }
    else if (code %in% c("list", "structure", "NULL", SModeNames)) {
        value <- list()
        for (i in seq(length = len)) {
        temp <- ReadSdump(FALSE, c(prefix, " "))
        value[[nam.or.i(temp$name,i)]] <- temp$value
        }
        if (code == "structure") {
        thelist <- value
        value <- thelist[[".Data"]]
        attributes(value) <-
            thelist[-match(c(".Data", ".Dim", ".Dimnames", ".Label"),
                   names(thelist), nomatch = 0)]
        dim(value) <- thelist[[".Dim"]]
        names(value) <- names(thelist[[".Data"]])
        if (!is.null(thelist[[".Label"]]))
            levels(value) <- thelist[[".Label"]]
        if (!is.null(thelist[[".Dimnames"]]))
            try(dimnames(value) <- thelist[[".Dimnames"]])
        if (!is.null(tsp <- thelist[[".Tsp"]]))# valid R ts()
            try(value <- stats::ts(c(value),tsp[1],tsp[2],tsp[3]))
        }
        else if (code == "function")
        try(value <- as.function(value,env=env))
        else if (code %in% c("break", "if", "for", "return", "S.call",
                 "while", "<-", "<<-", "(", "{"))
        value <- as.call(c(as.name(code), value))
        else if (code == "NULL") {
                value <- if (name != "") as.name(name)
            }
        else if (code == "call(...)")# these aren't special in R
        value <- value[[1]]
        else if (code == "comment") # ignore comments
        value <- NULL
        else if (code == "comment.expression")# just keep the expression, not the comment
        value <- value[unlist(lapply(value,function(y) !is.null(y)))][[1]]
        else if (code == "internal")
        value <- as.call(list(as.name(".Internal"),value[[1]]))

        else try(mode(value) <- code)
    }
    else {
        stop("S mode ", sQuote(code), " (near byte offset ",
                 seek(dump), ") not supported")
    }
    list(name = name, value = value)
    }
    repeat {
    temp <- ReadSdump(TRUE, " ")
    if(is.null(temp)) break
    assign(temp$name, temp$value, env = env)
    }
    file
}