R-packages – /trunk/cluster/ChangeLog

Rev 7668 – fix volume.ellipsoid( {d >= 3} ) thanks to Keefe ...

maechler — Wed, 15 May 2019 17:07:45 +0000

maechler – 10 file(s) modified
fix volume.ellipsoid( {d >= 3} ) thanks to Keefe Murphy`s prompting and proposal

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/inst/NEWS.Rd
~ /trunk/cluster/man/clara.Rd
~ /trunk/cluster/man/ellipsoidhull.Rd
~ /trunk/cluster/man/volume.ellipsoid.Rd
~ /trunk/cluster/R/ellipsoidhull.R
~ /trunk/cluster/R/plotpart.q
~ /trunk/cluster/tests/ellipsoid-ex.R
~ /trunk/cluster/tests/ellipsoid-ex.Rout.save

Rev 7300 – cosmetic updates to mona(), notably checks (before the bigger changes!)

maechler — Fri, 13 Jan 2017 16:55:57 +0000

maechler – 7 file(s) modified
cosmetic updates to mona(), notably checks (before the bigger changes!)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/mona.Rd
~ /trunk/cluster/R/mona.q
~ /trunk/cluster/src/mona.f
~ /trunk/cluster/tests/mona.R
~ /trunk/cluster/tests/mona.Rout.save

Rev 6988 – Now use NEWS.Rd (to replace ChangeLog); update message translations ...

maechler — Mon, 20 Jul 2015 08:32:15 +0000

maechler – 9 file(s) modified
Now use NEWS.Rd (to replace ChangeLog); update message translations - ready for release

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
+ /trunk/cluster/inst/NEWS.Rd
~ /trunk/cluster/inst/po/de/LC_MESSAGES/R-cluster.mo
~ /trunk/cluster/inst/po/en@quot/LC_MESSAGES/cluster.mo
~ /trunk/cluster/inst/po/en@quot/LC_MESSAGES/R-cluster.mo
~ /trunk/cluster/po/cluster.pot
~ /trunk/cluster/po/R-cluster.pot
~ /trunk/cluster/po/update-me.sh

Rev 6708 – better translatable messages (modified suggestions of Lukasz Daniel) + his ...

maechler — Wed, 26 Mar 2014 18:51:40 +0000

maechler – 13 file(s) modified
better translatable messages (modified suggestions of Lukasz Daniel) + his polish translations

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/po/R-pl.po
~ /trunk/cluster/R/0aaa.R
~ /trunk/cluster/R/agnes.q
~ /trunk/cluster/R/clara.q
~ /trunk/cluster/R/daisy.q
~ /trunk/cluster/R/diana.q
~ /trunk/cluster/R/ellipsoidhull.R
~ /trunk/cluster/R/fanny.q
~ /trunk/cluster/R/pam.q
~ /trunk/cluster/R/plotpart.q
~ /trunk/cluster/R/silhouette.R

Rev 6676 – fix example to run with pre R-3.0.x

maechler — Wed, 12 Mar 2014 10:32:21 +0000

maechler – 3 file(s) modified
fix example to run with pre R-3.0.x

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/mona.Rd

Rev 6592 – new agnes() method = "gaverage", generalized from contribution by Pierre ...

maechler — Wed, 06 Nov 2013 11:10:27 +0000

maechler – 7 file(s) modified
new agnes() method = "gaverage", generalized from contribution by Pierre Roudier

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/agnes.Rd
~ /trunk/cluster/NAMESPACE
~ /trunk/cluster/R/agnes.q
~ /trunk/cluster/src/twins.c
~ /trunk/cluster/tests/clara-151.R

Rev 6473 – + history

maechler — Wed, 27 Mar 2013 08:48:31 +0000

maechler – 1 file(s) modified
+ history

~ /trunk/cluster/ChangeLog

Rev 6069 – maxSE() as general utility and for #{cluster} for print()

maechler — Mon, 06 Feb 2012 12:39:34 +0000

maechler – 5 file(s) modified
maxSE() as general utility and for #{cluster} for print(<clusGap>)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/clusGap.Rd
~ /trunk/cluster/NAMESPACE
~ /trunk/cluster/R/clusGap.R

Rev 6039 – clusGap(): verbose=interactive();decrease default to B=100

maechler — Wed, 25 Jan 2012 07:42:38 +0000

maechler – 3 file(s) modified
clusGap(): verbose=interactive();decrease default to B=100

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/man/clusGap.Rd
~ /trunk/cluster/R/clusGap.R

Rev 6014 – new clusGap(): compute Tibshirani et al's gap statistic

maechler — Wed, 18 Jan 2012 11:02:11 +0000

maechler – 5 file(s) modified
new clusGap(): compute Tibshirani et al's gap statistic

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
+ /trunk/cluster/man/clusGap.Rd
~ /trunk/cluster/NAMESPACE
+ /trunk/cluster/R/clusGap.R

Rev 5978 – more twins.c code cleanup; export coefHier()

maechler — Wed, 21 Dec 2011 12:01:53 +0000

maechler – 7 file(s) modified
more twins.c code cleanup; export coefHier()

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/man/coef.hclust.Rd
~ /trunk/cluster/NAMESPACE
~ /trunk/cluster/R/coef.R
~ /trunk/cluster/src/cluster.h
~ /trunk/cluster/src/init.c
~ /trunk/cluster/src/twins.c

Rev 5977 – (part 2): "twins" changes; added more diana() examples

maechler — Wed, 21 Dec 2011 09:42:55 +0000

maechler – 13 file(s) modified
(part 2): "twins" changes; added more diana() examples

~ /trunk/cluster/.Rbuildignore
~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/diana.Rd
~ /trunk/cluster/NAMESPACE
~ /trunk/cluster/R/fanny.q
~ /trunk/cluster/R/mona.q
+ /trunk/cluster/tests/diana-boots.R
~ /trunk/cluster/tests/diana-ex.R
~ /trunk/cluster/tests/diana-ex.Rout.save
~ /trunk/cluster/tests/fanny-ex.Rout-32b
~ /trunk/cluster/tests/fanny-ex.Rout-64b
~ /trunk/cluster/TODO-MM

Rev 5957 – clusplot.default() should work with NA; allow other than prcomp() scores; ...

maechler — Sat, 03 Dec 2011 21:50:35 +0000

maechler – 4 file(s) modified
clusplot.default() should work with NA; allow other than prcomp() scores; add xlab, ylab optional arguments

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/clusplot.default.Rd
~ /trunk/cluster/R/plotpart.q

Rev 5927 – ready for release - maybe wait for translations?

maechler — Sun, 16 Oct 2011 16:05:21 +0000

maechler – 2 file(s) modified
ready for release - maybe wait for translations?

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION

Rev 5904 – update, mainly CITATION

maechler — Wed, 14 Sep 2011 21:12:43 +0000

maechler – 4 file(s) modified
update, mainly CITATION

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/inst/CITATION
~ /trunk/cluster/R/plotpart.q

Rev 5897 – fix plot.silhouette() ordering problem [reported by Gordon Robertson (R-help)]

maechler — Mon, 29 Aug 2011 09:32:55 +0000

maechler – 4 file(s) modified
fix plot.silhouette() ordering problem [reported by Gordon Robertson (R-help)]

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/silhouette.Rd
~ /trunk/cluster/R/silhouette.R

Rev 5840 – clusplot.default(): mkCheckX() factored out; new arguments 'add = FALSE', ...

maechler — Tue, 07 Jun 2011 10:33:53 +0000

maechler – 8 file(s) modified
clusplot.default(): mkCheckX() factored out; new arguments 'add = FALSE', 'cex' and 'cex.txt'

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/clusplot.default.Rd
~ /trunk/cluster/man/clusplot.partition.Rd
~ /trunk/cluster/R/clara.q
~ /trunk/cluster/R/plotpart.q
~ /trunk/cluster/tests/fanny-ex.Rout-64b
~ /trunk/cluster/tests/pam.Rout.save

Rev 5779 – we returned too early instead of signalling an error, when ...

maechler — Fri, 20 May 2011 20:58:50 +0000

maechler – 3 file(s) modified
we returned too early instead of signalling an error, when cluster.only=TRUE and some computed dissimilarities where NA

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/R/pam.q
~ /trunk/cluster/src/pam.c

Rev 5700 – VERSION 1.13.4: output updates for R-devel(2.13.0 to be)

maechler — Mon, 07 Mar 2011 13:20:32 +0000

maechler – 8 file(s) modified
VERSION 1.13.4: output updates for R-devel(2.13.0 to be)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/tests/clara-2.Rout.save
~ /trunk/cluster/tests/clara-MM.Rout.save
~ /trunk/cluster/tests/clara.Rout.save
~ /trunk/cluster/tests/diana-ex.Rout.save
~ /trunk/cluster/tests/ellipsoid-ex.Rout.save
~ /trunk/cluster/tests/pam.Rout.save

Rev 5685 – update - ready for release

maechler — Mon, 21 Feb 2011 11:09:55 +0000

maechler – 2 file(s) modified
update - ready for release

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION

Rev 5662 – "complete arg.names"

maechler — Sun, 12 Dec 2010 21:21:50 +0000

maechler – 4 file(s) modified
"complete arg.names"

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/ellipsoidhull.R
~ /trunk/cluster/R/plotpart.q

Rev 5648 – clara(): enforce sampsize > k (-> adapt checks)

maechler — Wed, 10 Nov 2010 08:03:21 +0000

maechler – 6 file(s) modified
clara(): enforce sampsize > k (-> adapt checks)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/clara.Rd
~ /trunk/cluster/R/clara.q
~ /trunk/cluster/tests/clara.R
~ /trunk/cluster/tests/clara.Rout.save

Rev 5646 – .C(clara..., DUP=)

maechler — Tue, 09 Nov 2010 10:19:06 +0000

maechler – 8 file(s) modified
.C(clara..., DUP=<change via envvar>)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/clara.q
~ /trunk/cluster/tests/clara-2.Rout.save
~ /trunk/cluster/tests/clara-ex.Rout.save
~ /trunk/cluster/tests/clara-MM.Rout.save
~ /trunk/cluster/tests/clara-NAs.Rout.save
~ /trunk/cluster/tests/clara.Rout.save

Rev 5644 – out-of-bound access ("nsel[-1]") fixed; ready for CRAN

maechler — Mon, 08 Nov 2010 22:31:01 +0000

maechler – 6 file(s) modified
out-of-bound access ("nsel[-1]") fixed; ready for CRAN

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/mona.q
~ /trunk/cluster/src/clara.c
~ /trunk/cluster/tests/clara-2.Rout.save
~ /trunk/cluster/tests/clara.Rout.save

Rev 5634 – omit the "_" in cl_() for fortran for now; Enhances

maechler — Thu, 21 Oct 2010 15:13:49 +0000

maechler – 7 file(s) modified
omit the "_" in cl_<name>() for fortran for now; Enhances

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/src/cluster.h
~ /trunk/cluster/src/daisy.f
~ /trunk/cluster/src/init.c
~ /trunk/cluster/src/mona.f
~ /trunk/cluster/tests/clusplot-out.Rout.save

Rev 5598 – more cleanup: use namespace-registered C & Fortran names; other cosmetic

maechler — Thu, 24 Jun 2010 10:20:48 +0000

maechler – 11 file(s) modified
more cleanup: use namespace-registered C & Fortran names; other cosmetic

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/daisy.Rd
~ /trunk/cluster/R/agnes.q
~ /trunk/cluster/R/coef.R
~ /trunk/cluster/R/diana.q
~ /trunk/cluster/R/ellipsoidhull.R
~ /trunk/cluster/R/plotpart.q
~ /trunk/cluster/R/silhouette.R
~ /trunk/cluster/tests/dysta-ex.R
~ /trunk/cluster/tests/dysta-ex.Rout.save

Rev 5595 – mathematical formula detailled description of generalized Gower formula; tests/ output ...

maechler — Thu, 24 Jun 2010 07:31:34 +0000

maechler – 10 file(s) modified
mathematical formula detailled description of *generalized* Gower formula; tests/ output update

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/daisy.Rd
~ /trunk/cluster/R/daisy.q
~ /trunk/cluster/tests/clara-2.Rout.save
~ /trunk/cluster/tests/clara-ex.Rout.save
~ /trunk/cluster/tests/clara-MM.Rout.save
+ /trunk/cluster/tests/fanny-ex.Rout-32b (copied from /trunk/cluster/tests/fanny-ex.Rout.save@5594)
+ /trunk/cluster/tests/fanny-ex.Rout-64b
x /trunk/cluster/tests/fanny-ex.Rout.save

Rev 5592 – rename some compiled routines, in order to allow registration of ...

maechler — Sat, 19 Jun 2010 16:37:03 +0000

maechler – 19 file(s) modified
rename some compiled routines, in order to allow registration of those names

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/NAMESPACE
~ /trunk/cluster/R/clara.q
~ /trunk/cluster/R/fanny.q
~ /trunk/cluster/R/mona.q
~ /trunk/cluster/R/pam.q
~ /trunk/cluster/R/zzz.R
~ /trunk/cluster/src/clara.c
~ /trunk/cluster/src/cluster.h
~ /trunk/cluster/src/fanny.c
~ /trunk/cluster/src/init.c
~ /trunk/cluster/src/mona.f
~ /trunk/cluster/src/pam.c
~ /trunk/cluster/src/spannel.c
~ /trunk/cluster/tests/clara-NAs.Rout.save
~ /trunk/cluster/tests/clara.Rout.save
~ /trunk/cluster/tests/fanny-ex.Rout.save
~ /trunk/cluster/tests/sweep-ex.R

Rev 5529 – reference page no. fix

maechler — Tue, 08 Dec 2009 10:51:46 +0000

maechler – 3 file(s) modified
reference page no. fix

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/daisy.Rd

Rev 5491 – cosmetic - 1.12.1 to be released

maechler — Mon, 05 Oct 2009 12:44:50 +0000

maechler – 4 file(s) modified
cosmetic - 1.12.1 to be released

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/ellipsoidhull.Rd
~ /trunk/cluster/tests/fanny-ex.Rout.save

Rev 5414 – silhouette(, .) no works

maechler — Wed, 13 May 2009 12:28:24 +0000

maechler – 5 file(s) modified
silhouette(<values *not* in 1:k>, .) no works

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/silhouette.R
~ /trunk/cluster/tests/silhouette-default.R
~ /trunk/cluster/tests/silhouette-default.Rout.save

Rev 5381 – last details before releasing 1.11.13 (2009-03-12)

maechler — Thu, 02 Apr 2009 20:21:00 +0000

maechler – 4 file(s) modified
last details before releasing 1.11.13 (2009-03-12)

~ /trunk/cluster/.Rbuildignore
~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/daisy.Rd

Rev 5328 – as.dendrogram() + ... , see ChangeLog

maechler — Wed, 21 Jan 2009 13:51:04 +0000

maechler – 7 file(s) modified
as.dendrogram() + ... , see ChangeLog

~ /trunk/cluster/.Rbuildignore
~ /trunk/cluster/ChangeLog
~ /trunk/cluster/man/plot.agnes.Rd
~ /trunk/cluster/NAMESPACE
~ /trunk/cluster/R/agnes.q
~ /trunk/cluster/tests/agnes-ex.Rout.save
~ /trunk/cluster/tests/fanny-ex.Rout.save

Rev 5319 – trivial output changes; one Rd_parse fix

maechler — Wed, 07 Jan 2009 11:35:56 +0000

maechler – 10 file(s) modified
trivial output changes; one Rd_parse fix

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/ellipsoidhull.Rd
~ /trunk/cluster/man/predict.ellipsoid.Rd
~ /trunk/cluster/R/ellipsoidhull.R
~ /trunk/cluster/tests/agnes-ex.Rout.save
~ /trunk/cluster/tests/ellipsoid-ex.R
~ /trunk/cluster/tests/ellipsoid-ex.Rout.save
~ /trunk/cluster/tests/fanny-ex.Rout.save
~ /trunk/cluster/tests/mona.Rout.save

Rev 5153 – fix very long standing sortSilhouette() bug

maechler — Sat, 14 Jun 2008 22:59:00 +0000

maechler – 3 file(s) modified
fix very long standing sortSilhouette() bug

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/silhouette.R

Rev 5062 – add .onUnload()

maechler — Thu, 10 Apr 2008 09:28:07 +0000

maechler – 4 file(s) modified
add .onUnload()

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/zzz.R
~ /trunk/cluster/tests/fanny-ex.R

Rev 4967 – misc. updates since September; notably pam(, do.swap)

maechler — Fri, 29 Feb 2008 11:13:02 +0000

maechler – 20 file(s) modified
misc. updates since September; notably pam(<large>, do.swap)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/clara.Rd
~ /trunk/cluster/man/pam.Rd
~ /trunk/cluster/R/clara.q
~ /trunk/cluster/R/pam.q
~ /trunk/cluster/src/cluster.h
~ /trunk/cluster/src/ind_2.h
~ /trunk/cluster/src/pam.c
~ /trunk/cluster/tests/clara-2.Rout.save
~ /trunk/cluster/tests/clara-ex.Rout.save
~ /trunk/cluster/tests/clara-NAs.Rout.save
~ /trunk/cluster/tests/clusplot-out.R
~ /trunk/cluster/tests/clusplot-out.Rout.save
~ /trunk/cluster/tests/daisy-ex.Rout.save
~ /trunk/cluster/tests/ellipsoid-ex.Rout.save
~ /trunk/cluster/tests/fanny-ex.Rout.save
~ /trunk/cluster/tests/mona.Rout.save
~ /trunk/cluster/tests/pam.R
~ /trunk/cluster/tests/pam.Rout.save

Rev 4762 – eliminate -Wall warnings; release 1.11.8

maechler — Tue, 04 Sep 2007 16:33:14 +0000

maechler – 4 file(s) modified
eliminate -Wall warnings; release 1.11.8

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/src/fanny.c
~ /trunk/cluster/src/mona.f

Rev 4420 – small changes; == status of release 1.11.7

maechler — Tue, 05 Jun 2007 13:17:22 +0000

maechler – 7 file(s) modified
small changes; == status of release 1.11.7

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/man/plantTraits.Rd
~ /trunk/cluster/man/plot.agnes.Rd
~ /trunk/cluster/man/plot.diana.Rd
~ /trunk/cluster/man/pltree.twins.Rd
~ /trunk/cluster/tests/daisy-ex.Rout.save

Rev 4321 – the small changes that went into new CRAN version 1.11.6 ...

maechler — Tue, 01 May 2007 21:12:23 +0000

maechler – 7 file(s) modified
the small changes that went into new CRAN version 1.11.6 (last week!)

~ /trunk/cluster/ChangeLog
~ /trunk/cluster/DESCRIPTION
~ /trunk/cluster/R/daisy.q
~ /trunk/cluster/R/diana.q
~ /trunk/cluster/src/clara.c
~ /trunk/cluster/tests/fanny-ex.Rout.save
~ /trunk/cluster/TODO-MM