The R Project SVN R-packages

#include <stdio.h>

#include <string.h>

#include "sqlite_dataframe.h"

/****************************************************************************

 * UTILITY FUNCTIONS

 ****************************************************************************/

/* if user supplied a name (1st arg), return that name. otherwise, use the 

 * default "data". rname is R name, iname is internal name */

static int _check_sdf_name(SEXP name, char **rname, char **iname, int *file_idx) {

    int namelen = 0;

    /* check if arg name is supplied */

    if (name == R_NilValue) {

        *rname = "data";

        namelen = 5;

        *iname = (char*)R_alloc(13, sizeof(char)); /* .SQLiteDF/data10000.db\0 */

        *file_idx = 1;

        sprintf(*iname, "%s%d.db", *rname, *file_idx);

    } else if (IS_CHARACTER(name)) {

        *rname = CHAR_ELT(name,0);

        if (!_is_r_sym(*rname)) { 

            error("supplied name \"%s\"is not a valid R symbol.", *rname); 

        }

        namelen = strlen(*rname);

        *iname = (char*)R_alloc(namelen + 9, sizeof(char)); /* .SQLiteDF/<name>10000.db\0 */

        sprintf(*iname, "%s.db", *rname);

    } else {

        Rprintf("Error: the supplied value for arg name is not a string.\n");

    }

    return namelen;

}

static int _find_free_filename2(char *rname, char *dirname, char **iname, int *namelen, int *file_idx) {

    sqlite3_stmt *stmt;

    char *tmp_iname;

    sqlite3_prepare(g_workspace, "select 1 from workspace where internal_name=?", -1,

            &stmt, NULL);

    do {

        if (dirname != NULL) {

            sprintf(g_sql_buf[2], "%s/%s", dirname, *iname);

            tmp_iname = g_sql_buf[2];

        } else {

            tmp_iname = *iname;

        }

        if (!_file_exists(tmp_iname)) {

            sqlite3_reset(stmt);

            sqlite3_bind_text(stmt, 1, tmp_iname, -1, SQLITE_STATIC);

            if (sqlite3_step(stmt) != SQLITE_ROW) break;

        }

        *namelen = sprintf(*iname, "%s%d.db", rname, ++(*file_idx)) - 3;

    } while (*file_idx < 10000);

    sqlite3_finalize(stmt);

    return *file_idx;

}

/* creates an sdf attribute table */

static int _create_sdf_attribute2(const char *iname) {

    sprintf(g_sql_buf[2], "create table [%s].sdf_attributes(attr text, "

            "value text, primary key (attr))", iname);

    int res;

    res = _sqlite_exec(g_sql_buf[2]);

    if (res == SQLITE_OK) {

        sprintf(g_sql_buf[2], "insert into [%s].sdf_attributes values ('name',"

                "'%s');", iname, iname);

        res = _sqlite_exec(g_sql_buf[2]);

    }

    return res;

}

char *_create_sdf_skeleton1(SEXP name, int *onamelen, int protect) {

    char *iname, *rname;

    int namelen, file_idx = 0, res;

    namelen = _check_sdf_name(name, &rname, &iname, &file_idx);

    if (!namelen) return NULL;

    _find_free_filename2(rname, ".SQLiteDF", &iname, &namelen, &file_idx);

    if (file_idx >= 10000) { 

        Rprintf("Error: cannot find free SDF name.\n");

        return NULL;

    }

    /* add to workspace */

    sprintf(g_sql_buf[3], ".SQLiteDF/%s", iname);

    iname[namelen] = 0; /* remove ".db" */

    res = _add_sdf1(g_sql_buf[3], iname);

    if (_sqlite_error(res)) return NULL;

    /* detach SDF's if necessary to attach this one. if file does not

     * exist, then a sqlite db will be created after we make our 1st table */

    if (!USE_SDF1(iname, FALSE, protect)) { /* _delete_sdf2(iname); */ return NULL; }

    /* create attributes table */

    res = _create_sdf_attribute2(iname);

    if (_sqlite_error(res)) {

        sprintf(g_sql_buf[2], "detach '%s'", iname);

        _delete_sdf2(iname);

        return NULL; 

    }

    if (onamelen) *onamelen = namelen;

    return iname;

}

/* checks if a column has a corresponding factor|ordered table */

int _is_factor2(const char *iname, const char *factor_type, const char *colname) {

    sqlite3_stmt *stmt;

    sprintf(g_sql_buf[2], "select * from [%s].[%s %s]", iname, factor_type,

            colname);

    int res;

    res = sqlite3_prepare(g_workspace, g_sql_buf[2], -1, &stmt, 0);

    sqlite3_finalize(stmt);

    return res == SQLITE_OK;

}

/* create a factor|ordered table */

int _create_factor_table2(const char *iname, const char *factor_type, 

        const char *colname) {

    sqlite3_stmt *stmt;

    sprintf(g_sql_buf[2], "create table [%s].[%s %s] (level int, label text, "

            "primary key(level), unique(label));", iname, factor_type, colname);

    int res;

    res = sqlite3_prepare(g_workspace, g_sql_buf[2], -1, &stmt, 0);

    if (res == SQLITE_OK) sqlite3_step(stmt);

    sqlite3_finalize(stmt);

    return res; /* error on dup name? */

}

/* copy a factor|ordered table from a sdf(db) to another sdf(db) */

int _copy_factor_levels2(const char *factor_type, const char *iname_src,

        const char *colname_src, const char *iname_dst, const char *colname_dst) {

    sqlite3_stmt *stmt;

    int res;

    res = _create_factor_table2(iname_dst, factor_type, colname_dst);

    if (res == SQLITE_OK) {

        sprintf(g_sql_buf[2], "insert into [%s].[%s %s] select * from [%s].[%s %s]",

                iname_dst, factor_type, colname_dst, iname_src, factor_type,

                colname_src);

        res = sqlite3_prepare(g_workspace, g_sql_buf[2], -1, &stmt, 0);

        if (res == SQLITE_OK) res = sqlite3_step(stmt);

        sqlite3_finalize(stmt);

    }

    return res; /* error on dup name? */

}

/* assumes stmt has col_cnt + 1 columns, col 0 is [row name]. returned SEXP is 

 * not UNPROTECT-ed, user will have to do that. will create the names &

 * attach factor infos */

static SEXP _setup_df_sexp1(sqlite3_stmt *stmt, const char *iname, 

        int col_cnt, int row_cnt, int *dup_indices) {

    SEXP ret, names, value, class = R_NilValue;

    int i, type;

    const char *colname, *coltype;

    PROTECT(ret = NEW_LIST(col_cnt));

    /* set up names. */

    PROTECT(names = NEW_CHARACTER(col_cnt));

    for (i = 0; i < col_cnt; i++) {

        colname = sqlite3_column_name(stmt, i+1);  /* +1 bec [row name is 0] */

        coltype = sqlite3_column_decltype(stmt, i+1);

        if (dup_indices[i] == 0) {

            strcpy(g_sql_buf[1], colname);

        } else {

            sprintf(g_sql_buf[1], "%s.%d", colname, dup_indices[i]);

        }

        SET_STRING_ELT(names, i, mkChar(g_sql_buf[1]));

        if (strcmp(coltype, "text") == 0) {

            PROTECT(value = NEW_CHARACTER(row_cnt));

        } else if (strcmp(coltype, "double") == 0) {

            PROTECT(value = NEW_NUMERIC(row_cnt));

        } else if (strcmp(coltype, "bit") == 0) {

            PROTECT(value = NEW_LOGICAL(row_cnt));

        } else if (strcmp(coltype, "integer") == 0 || 

                   strcmp(coltype, "int") == 0) {

            PROTECT(value = NEW_INTEGER(row_cnt));

            type = _get_factor_levels1(iname, colname, value);

            if (type == VAR_FACTOR) {

                PROTECT(class = mkString("factor"));

                SET_CLASS(value, class);

                UNPROTECT(1);

            } else if (type == VAR_ORDERED) {

                PROTECT(class = NEW_CHARACTER(2));

                SET_STRING_ELT(class, 0, mkChar("ordered"));

                SET_STRING_ELT(class, 1, mkChar("factor"));

                SET_CLASS(value, class);

                UNPROTECT(1);

            }

        } else {

            Rprintf("Error: not supported type %s for %s\n", coltype, colname);

            UNPROTECT(2); /* unprotect ret, names */

            return R_NilValue;

        }

        SET_VECTOR_ELT(ret, i, value);

        UNPROTECT(1); /* unprotect value */

    }

    SET_NAMES(ret, names);

    UNPROTECT(1); /* unprotect names only */

    return ret;

}

/* expected that 1st col of stmt is [row name], so we start with index 1 */

static int _add_row_to_df(SEXP df, sqlite3_stmt *stmt, int row, int ncols) {

    SEXP vec;

    int type = -1, is_null, i;

    for (i = 1; i <= ncols; i++) {

        vec = VECTOR_ELT(df, i-1);

        type = TYPEOF(vec);

        is_null = (sqlite3_column_type(stmt, row) == SQLITE_NULL);

        if (type == STRSXP || type == CHARSXP) {

            SET_STRING_ELT(vec, row, mkChar((char *)sqlite3_column_text(stmt, i)));

        } else if (type == INTSXP) {

            INTEGER(vec)[row] = sqlite3_column_int(stmt, i);

        } else if (type == REALSXP) {

            REAL(vec)[row] = sqlite3_column_double(stmt, i);

        } else if (type == LGLSXP) {

            LOGICAL(vec)[row] = sqlite3_column_int(stmt, i);

        }

    }

    return type;

}

/* set ordinary df row name as numbers */

static void _set_rownames2(SEXP df) {

    SEXP value = VECTOR_ELT(df, 0);

    int len = LENGTH(value), i;

    PROTECT(value = NEW_CHARACTER(len));

    for (i = 0; i < len; i++) {

        sprintf(g_sql_buf[2], "%d", i+1);

        SET_STRING_ELT(value, i, mkChar(g_sql_buf[2]));

    }

    SET_ROWNAMES(df, value);

    UNPROTECT(1);

}

/****************************************************************************

 * SDF FUNCTIONS

 ****************************************************************************/

SEXP sdf_create_sdf(SEXP df, SEXP name) {

    SEXP ret;

    char *iname; 

    int namelen, res, i, j;

    /* find free name, attach sdf, create sdf_attributes */

    iname = _create_sdf_skeleton1(name, &namelen, FALSE);

    if (iname != NULL) {

        int sql_len, sql_len2;

        sqlite3_stmt *stmt;

        /* create sdf_data table */

        SEXP names = GET_NAMES(df), variable, levels, var_class;

        int ncols = GET_LENGTH(names), type, *types;

        char *col_name, *class, *factor;

        /* variables for adding rownames */

        SEXP rownames;

        int nrows;

        char *row_name;

        /* TODO: put constraints on table after inserting everything? */

        /* 

         * create the create table and insert sql scripts by looping through

         * the columns of df

         */

        types = (int *)R_alloc(ncols, sizeof(int));

        sql_len = sprintf(g_sql_buf[0], "create table [%s].sdf_data ([row name] text", iname);

        sql_len2 = sprintf(g_sql_buf[1], "insert into [%s].sdf_data values(?", iname);

        for (i = 0; i < ncols; i++) {

            col_name = CHAR(STRING_ELT(names, i));

            /* add column definition to the create table sql */

            _expand_buf(0, sql_len+strlen(col_name)+10);

            variable = _getListElement(df, col_name);

            var_class = GET_CLASS(variable);

            class = (var_class == R_NilValue) ? NULL : CHAR(STRING_ELT(var_class, 0));

            type = TYPEOF(variable);

            types[i] = type;

            sql_len += sprintf(g_sql_buf[0]+sql_len, ", [%s] %s", col_name, 

                    _get_column_type(class, type));

            /* add handler to insert table sql */

            _expand_buf(1, sql_len+5);

            strcpy(g_sql_buf[1]+sql_len2, ",?");

            sql_len2 += 2; 

            /* create separate table for factors decode */

            if (class != NULL && (strcmp(class, "factor") == 0 || strcmp(class, "ordered") == 0)){

                if (_create_factor_table2(iname, class, col_name)) 

                    return R_NilValue; /* dup tbl name? */

                _sqlite_exec("begin");

                levels = GET_LEVELS(variable);

                sprintf(g_sql_buf[2], "insert into [%s].[%s %s] values(?, ?);",

                        iname, class, col_name);

                res = sqlite3_prepare(g_workspace, g_sql_buf[2], -1, &stmt, NULL);

                if (_sqlite_error(res)) return R_NilValue; /* dup tbl name? */

                for (j = 0; j < GET_LENGTH(levels); j++) {

                    sqlite3_reset(stmt);

                    factor = CHAR(STRING_ELT(levels, j));

                    sqlite3_bind_int(stmt, 1, j+1);

                    sqlite3_bind_text(stmt, 2, factor, -1, SQLITE_STATIC);

                    sqlite3_step(stmt);

                }

                sqlite3_finalize(stmt);

                _sqlite_exec("commit");

            }

        }

        _expand_buf(0,sql_len+35);

        sql_len += sprintf(g_sql_buf[0]+sql_len, ", primary key([row name]));");

        /* sql_len += sprintf(g_sql_buf[0]+sql_len, ");"); */

        res = _sqlite_exec(g_sql_buf[0]);

        if (_sqlite_error(res)) return R_NilValue; /* why? */

        /*

         * add the data in df to the sdf

         */

        rownames = getAttrib(df, R_RowNamesSymbol);

        nrows = GET_LENGTH(rownames);

        _sqlite_error(_sqlite_exec("begin"));

        sprintf(g_sql_buf[1]+sql_len2, ")");

        res = sqlite3_prepare(g_workspace, g_sql_buf[1], -1, &stmt, NULL);

        for (i = 0; i < nrows; i++) {

            sqlite3_reset(stmt);

            /* since this is coming from a real dataframe, we're assured that

             * the rownames are unique */

            if (IS_CHARACTER(rownames)) {

                row_name = CHAR(STRING_ELT(rownames, i));

                if (*row_name) /* if not empty string */

                    sqlite3_bind_text(stmt, 1, row_name, strlen(row_name), SQLITE_STATIC);

                else sqlite3_bind_int(stmt, 1, i);

            } else if (IS_INTEGER(rownames)) {

                sqlite3_bind_int(stmt, 1, INTEGER(rownames)[i]);

            } else sqlite3_bind_int(stmt, 1, i);

            for (j = 0; j < ncols; j++) {

                variable = VECTOR_ELT(df, j);

                switch(types[j]) {

                    case INTSXP : 

                        sqlite3_bind_int(stmt, j+2, INTEGER(variable)[i]);

                        break;

                    case REALSXP:

                        sqlite3_bind_double(stmt, j+2, REAL(variable)[i]);

                        break;

                    case CHARSXP:

                    case STRSXP:

                        sqlite3_bind_text(stmt, j+2, CHAR_ELT(variable, i), -1, SQLITE_STATIC);

                }

                /* TODO: handle NA's & NULL's */

            }

            res = sqlite3_step(stmt);

            if (res != SQLITE_DONE) { 

                _sqlite_exec("ROLLBACK");

                sqlite3_finalize(stmt);

                Rprintf("SQLITE ERROR: %s\n", sqlite3_errmsg(g_workspace));

                return R_NilValue; /* why? */

            }

        }

        sqlite3_finalize(stmt);

        _sqlite_error(_sqlite_exec("COMMIT"));

        /* create a new object representing the sdf */

        ret = _create_sdf_sexp(iname);

    } else {

        Rprintf("ERROR: unable to create a sqlite data frame.\n");

        ret = R_NilValue;

    }

    return ret;

}

SEXP sdf_get_names(SEXP sdf) {

    char *iname;

    iname = SDF_INAME(sdf);

    if (!USE_SDF1(iname, TRUE, FALSE)) return R_NilValue;

    int len;

    len = sprintf(g_sql_buf[0], "select * from [%s].sdf_data;", iname);

    sqlite3_stmt *stmt;

    int res, i;

    res = sqlite3_prepare(g_workspace, g_sql_buf[0], len, &stmt, NULL);

    if (_sqlite_error(res)) return R_NilValue;

    SEXP ret;

    len = sqlite3_column_count(stmt)-1;

    PROTECT(ret = NEW_CHARACTER(len));

    for (i = 0; i < len; i++) {

        SET_STRING_ELT(ret, i, mkChar(sqlite3_column_name(stmt, i+1)));

    }

    sqlite3_finalize(stmt);

    UNPROTECT(1);

    return ret;

}

SEXP sdf_get_length(SEXP sdf) {

    char *iname;

    int len;

    sqlite3_stmt *stmt;

    int res;

    iname  = CHAR(STRING_ELT(_getListElement(sdf, "iname"),0));

    sprintf(g_sql_buf[0], "select * from [%s].sdf_data;", iname);

    if (!USE_SDF1(iname, TRUE, FALSE)) return R_NilValue;

    res = sqlite3_prepare(g_workspace, g_sql_buf[0], -1, &stmt, NULL);

    if (_sqlite_error(res)) return R_NilValue;

    len = sqlite3_column_count(stmt)-1;

    sqlite3_finalize(stmt);

    return ScalarInteger(len);

}

/* get row count */

SEXP sdf_get_row_count(SEXP sdf) {

    char *iname = CHAR(STRING_ELT(_getListElement(sdf, "iname"),0));

    if (!USE_SDF1(iname, TRUE, FALSE)) return R_NilValue;

    int nrow;

    SEXP ret;

    nrow = _get_row_count2(iname, TRUE);

    if (nrow < 1) ret = R_NilValue;

    else ret = ScalarInteger(nrow);

    return ret;

}

SEXP sdf_import_table(SEXP _filename, SEXP _name, SEXP _sep, SEXP _quote, 

        SEXP _rownames, SEXP _colnames) {

    char *filename = CHAR_ELT(_filename, 0);

    FILE *f = fopen(filename, "r");

    if (f == NULL) {

        Rprintf("Error: File %s does not exist.", filename);

        return R_NilValue;

    }

    /*char *sep = CHAR_ELT(_sep, 0), *quote = CHAR_ELT(_quote,0);

    char *name = CHAR_ELT(_name, 0);*/

    /* create the table */

    /* insert the stuffs */

    /* register to workspace */

    return R_NilValue;

}

SEXP sdf_get_index(SEXP sdf, SEXP row, SEXP col, SEXP new_sdf) {

    SEXP ret = R_NilValue;

    char *iname = SDF_INAME(sdf);

    sqlite3_stmt *stmt;

    int buflen = 0, idxlen, col_cnt, row_cnt, index;

    int i, j,res;

    int *col_indices, col_index_len, *dup_indices;

    int row_index_len = 0, force_new_df = LOGICAL(new_sdf)[0];

    const char *colname;

    /* dup_indices is used to handle when same column chosen more than once.

     * e.g. iris[,c(1,1)] have names Sepal.Length, Sepal.Length.1 *

     * col_indices is used to store the column index of selected columns

     * in the sdf_data table */

    if (!USE_SDF1(iname, TRUE, TRUE)) return R_NilValue;

    sprintf(g_sql_buf[0], "select * from [%s].sdf_data ", iname);

    res = sqlite3_prepare(g_workspace, g_sql_buf[0], -1, &stmt, 0);

    if (_sqlite_error(res)) return R_NilValue;

    buflen = sprintf(g_sql_buf[0], "select [row name]");

    idxlen = LENGTH(col);

    col_cnt = sqlite3_column_count(stmt) - 1;

    /*

     * PROCESS COLUMN INDEX: set columns in the select statement

     */

    if (col == R_NilValue) {

        for (i = 1; i < col_cnt+1; i++) {

            colname = sqlite3_column_name(stmt, i);

            buflen += sprintf(g_sql_buf[0]+buflen, ",[%s]", colname);

        }

        _expand_buf(0, buflen+20+strlen(iname));

        buflen += sprintf(g_sql_buf[0]+buflen, " from [%s].sdf_data", iname);

        col_index_len = col_cnt;

        col_indices = (int *)R_alloc(col_cnt, sizeof(int));

        dup_indices = (int *)R_alloc(col_cnt, sizeof(int));

        for (i = 0; i < col_cnt; i++) { col_indices[i] = i; dup_indices[i] = 0; }

    } else if (col == R_NilValue || idxlen < 1) {

        sqlite3_finalize(stmt);

        return R_NilValue;

    } else if (IS_NUMERIC(col)) {

        col_indices = (int *)R_alloc(idxlen, sizeof(int));

        dup_indices = (int *)R_alloc(idxlen, sizeof(int));

        col_index_len = 0;

        for (i = 0; i < idxlen; i++) {

            /* no need to correct for 0 base because col 0 is [row name] */

            index = ((int) REAL(col)[i]); 

            if (index > col_cnt) {

                sqlite3_finalize(stmt);

                error("undefined columns selected\n");

            } else if (index > 0) {

                colname = sqlite3_column_name(stmt,index);

                buflen += sprintf(g_sql_buf[0]+buflen, ",[%s]", colname);

                dup_indices[col_index_len] = 0;

                for (j = 0; j < col_index_len; j++) {

                    if (col_indices[j] == index) dup_indices[col_index_len]++;

                }

                col_indices[col_index_len++] = index;

            } else if (index < 0) {

                sqlite3_finalize(stmt);

                error("negative indices not supported.\n");

            }

        }

        if (col_index_len == 0) {

            sqlite3_finalize(stmt);

            Rprintf("Error: no indices detected??\n");

            return R_NilValue;

        } else { 

            _expand_buf(0, buflen+20+strlen(iname));

            buflen += sprintf(g_sql_buf[0]+buflen, " from [%s].sdf_data", iname);

        }

    } else if (IS_INTEGER(col)) {

        /* identical logic with IS_NUMERIC, except that we don't have to cast

         * stuffs from SEXP col. the alternative is doing if idxlen times. */

        col_indices = (int *)R_alloc(idxlen, sizeof(int));

        dup_indices = (int *)R_alloc(idxlen, sizeof(int));

        col_index_len = 0;

        for (i = 0; i < idxlen; i++) {

            /* no need to correct for 0 base because col 0 is [row name] */

            index = INTEGER(col)[i];

            if (index > col_cnt) {

                sqlite3_finalize(stmt);

                error("undefined columns selected\n");

            } else if (index > 0) {

                colname = sqlite3_column_name(stmt,index);

                buflen += sprintf(g_sql_buf[0]+buflen, ",[%s]", colname);

                dup_indices[col_index_len] = 0;

                for (j = 0; j < col_index_len; j++) {

                    if (col_indices[j] == index) dup_indices[col_index_len]++;

                }

                col_indices[col_index_len++] = index;

            } else if (index < 0) {

                sqlite3_finalize(stmt);

                error("negative indices not supported.\n");

            }

        }

        if (col_index_len == 0) {

            sqlite3_finalize(stmt);

            Rprintf("Error: no indices detected??\n");

            return R_NilValue;

        } else { 

            _expand_buf(0, buflen+20+strlen(iname));

            buflen += sprintf(g_sql_buf[0]+buflen, " from [%s].sdf_data", iname);

        }

    } else if (IS_LOGICAL(col)) {

        /* recycling stuff, so max column output is the # of cols in the df */

        col_indices = (int *)R_alloc(col_cnt, sizeof(int));

        dup_indices = (int *)R_alloc(col_cnt, sizeof(int));

        col_index_len = 0;

        for (i = 0; i < col_cnt; i++) {

            if (LOGICAL(col)[i%idxlen]) {

                buflen += sprintf(g_sql_buf[0]+buflen, ",[%s]", 

                        sqlite3_column_name(stmt,i+1));

                dup_indices[col_index_len] = 0;

                col_indices[col_index_len++] = i;

            }

        }

        if (col_index_len == 0) {

            sqlite3_finalize(stmt);

            warning("no column selected.\n");

            return R_NilValue;

        } else { 

            _expand_buf(0, buflen+20+strlen(iname));

            buflen += sprintf(g_sql_buf[0]+buflen, " from [%s].sdf_data", iname);

        }

    } else {

        sqlite3_finalize(stmt);

        error("don't know how to handle column index.\n");

    }

    /* 

     * PROCESS ROW INDEX: setup limit or where clause

     */

    idxlen = LENGTH(row);

    if (row == R_NilValue) {

        if (col_index_len == 1 && !force_new_df) {

            ret = sdf_get_variable(sdf, mkString(sqlite3_column_name(stmt,col_indices[0])));

            sqlite3_finalize(stmt);

            return ret;

        } if (col_index_len > 1 || (force_new_df && col_index_len == 1)) {

            /* create a new SDF, logic similar to sdf_create_sdf */

            /* find a new name. data<n> ? */

            char *iname2;

            int namelen, sql_len, sql_len2;

            iname2 = _create_sdf_skeleton1(R_NilValue, &namelen, TRUE);

            /* create sdf_data table */

            sql_len = sprintf(g_sql_buf[1], "create table [%s].sdf_data ([row name] text", iname2);

            sql_len2 = 0;

            for (i = 0; i < col_index_len; i++) {

                colname = sqlite3_column_name(stmt, col_indices[i]);

                if (dup_indices[i] == 0) {

                    sql_len += sprintf(g_sql_buf[1]+sql_len, ", [%s] %s", colname,

                            sqlite3_column_decltype(stmt, col_indices[i]));

                } else {

                    /* un-duplicate col names by appending num, just like R */

                    sql_len += sprintf(g_sql_buf[1]+sql_len, ", [%s.%d] %s", colname,

                            dup_indices[i], 

                            sqlite3_column_decltype(stmt, col_indices[i]));

                }

                /* deal with possibly factor columns */

                if (_is_factor2(iname, "factor", colname)) {

                    /* found a factor column */

                    if (dup_indices[i] == 0)  {

                        _copy_factor_levels2("factor", iname, colname, iname2, colname);

                    } else {

                        sprintf(g_sql_buf[3], "%s.%d", colname, dup_indices[i]);

                        _copy_factor_levels2("factor", iname, colname, iname2, 

                                g_sql_buf[3]);

                    }

                }

                /* and deal with ordered factors too... life is hard, then you die */

                if (_is_factor2(iname, "ordered", colname)) {

                    if (dup_indices[i] == 0)  {

                        _copy_factor_levels2("ordered", iname, colname, iname2, 

                                colname);

                    } else {

                        sprintf(g_sql_buf[3], "%s.%d", colname, dup_indices[i]);

                        _copy_factor_levels2("ordered", iname, colname, iname2, 

                                g_sql_buf[3]);

                    }

                }

            }

            /* don't need it anymore */

            sqlite3_finalize(stmt);

            /* no table index created, that's for v2 I hope*/

            sql_len += sprintf(g_sql_buf[1]+sql_len, ");");

            res = _sqlite_exec(g_sql_buf[1]);

            if (_sqlite_error(res)) { Rprintf("here? %s\n", g_sql_buf[1]); return R_NilValue; }

            /* insert data (with row names). buf[0] contains a select */

            sprintf(g_sql_buf[1], "insert into [%s].sdf_data %s", iname2,

                    g_sql_buf[0]);

            res = _sqlite_exec(g_sql_buf[1]);

            if (_sqlite_error(res)) return R_NilValue;

            /* remove protection */

            UNUSE_SDF2(iname2);

            /* create SEXP for the SDF */

            ret = _create_sdf_sexp(iname2);

            return ret;

        } else { sqlite3_finalize(stmt); return R_NilValue; }

    } else if (row == R_NilValue || idxlen < 1) {

        sqlite3_finalize(stmt);

        return R_NilValue;

    } else if (IS_NUMERIC(row)) {

        sqlite3_finalize(stmt);

        sprintf(g_sql_buf[1], "[%s].sdf_data", iname);

        row_cnt = _get_row_count2(g_sql_buf[1], 0);

        /* append " limit ?,1" to the formed select statement */

        _expand_buf(0, buflen+10);

        buflen += sprintf(g_sql_buf[0]+buflen, " limit ?,1");

        /*Rprintf("sql [%d]: %s\n", buflen, g_sql_buf[0]); */

        index = ((int) REAL(row)[0]) - 1;

        if (idxlen < 0 && idxlen == 1) return R_NilValue;

        res = sqlite3_prepare(g_workspace, g_sql_buf[0], -1, &stmt, 0);

        if (_sqlite_error(res)) return R_NilValue;

        sqlite3_bind_int(stmt, 1, index);

        res = sqlite3_step(stmt);

        /* create data frame */

        ret = _setup_df_sexp1(stmt, iname, col_index_len, idxlen, dup_indices);

        if (ret == R_NilValue) { sqlite3_finalize(stmt); return R_NilValue; }

        /* put data in it */

        if (index >= 0 && index < row_cnt) {

            _add_row_to_df(ret, stmt, row_index_len++, col_index_len);

        }

        for (i = 1; i < idxlen; i++) {

            sqlite3_reset(stmt);

            index = ((int) REAL(row)[i]) - 1;

            if (index >= 0 && index < row_cnt) {

                sqlite3_bind_int(stmt, 1, index);

                res = sqlite3_step(stmt);

                _add_row_to_df(ret, stmt, row_index_len++, col_index_len);

            }

        }

        sqlite3_finalize(stmt);

        /* shrink vectors */

        if (row_index_len < idxlen) {

            for (i = 0; i < col_index_len; i++) {

                SET_VECTOR_ELT(ret, i, 

                        _shrink_vector(VECTOR_ELT(ret, i), row_index_len));

            }

        }

        UNPROTECT(1); /* for the ret from _setup_df_sexp1 */

    } else if (IS_INTEGER(row)) {

        /* same stuff as with IS_INTEGER, except for setting of var index*/

        sqlite3_finalize(stmt);

        sprintf(g_sql_buf[1], "[%s].sdf_data", iname);

        row_cnt = _get_row_count2(g_sql_buf[1], 0);

        /* append " limit ?,1" to the formed select statement */

        _expand_buf(0, buflen+10);

        buflen += sprintf(g_sql_buf[0]+buflen, " limit ?,1");

        index = INTEGER(row)[0] - 1;

        if (idxlen < 0 && idxlen == 1) return R_NilValue;

        res = sqlite3_prepare(g_workspace, g_sql_buf[0], -1, &stmt, 0);

        if (_sqlite_error(res)) return R_NilValue;

        sqlite3_bind_int(stmt, 1, index);

        res = sqlite3_step(stmt);

        /* create data frame */

        ret = _setup_df_sexp1(stmt, iname, col_index_len, idxlen, dup_indices);

        if (ret == R_NilValue) { sqlite3_finalize(stmt); return R_NilValue; }

        /* put data in it */

        if (index >= 0 && index < row_cnt) {

            _add_row_to_df(ret, stmt, row_index_len++, col_index_len);

        }

        for (i = 1; i < idxlen; i++) {

            sqlite3_reset(stmt);

            index = INTEGER(row)[i] - 1;

            if (index >= 0 && index < row_cnt) {

                sqlite3_bind_int(stmt, 1, index);

                res = sqlite3_step(stmt); 

                _add_row_to_df(ret, stmt, row_index_len++, col_index_len);

            }

        }

        sqlite3_finalize(stmt);

        /* shrink vectors */

        if (row_index_len < idxlen) {

            for (i = 0; i < col_index_len; i++) {

                SET_VECTOR_ELT(ret, i, 

                        _shrink_vector(VECTOR_ELT(ret, i), row_index_len));

            }

        }

        UNPROTECT(1); /* for the ret from _setup_df_sexp1 */

    } else if (IS_LOGICAL(row)) {

        /* */

        sqlite3_finalize(stmt);

        int est_row_cnt = 0;

        sprintf(g_sql_buf[1], "[%s].sdf_data", iname);

        row_cnt = _get_row_count2(g_sql_buf[1], 0);

        /* append " limit ?,1" to the formed select statement */

        _expand_buf(0, buflen+10);

        buflen += sprintf(g_sql_buf[0]+buflen, " limit ?,1");

        /* find if there is any TRUE element in the vector */

        for (i = 0; i < idxlen && i < row_cnt; i++) {

            if (LOGICAL(row)[i]) break;

        }

        if (i < idxlen && i < row_cnt) {

            est_row_cnt = (idxlen-i) * (row_cnt/idxlen);

            if (row_cnt%idxlen > i) est_row_cnt += (row_cnt%idxlen - i);

            res = sqlite3_prepare(g_workspace, g_sql_buf[0], -1, &stmt, 0);

            if (_sqlite_error(res)) return R_NilValue;

            sqlite3_bind_int(stmt, 1, i);

            sqlite3_step(stmt);

            ret = _setup_df_sexp1(stmt, iname, col_index_len, est_row_cnt, dup_indices);

            _add_row_to_df(ret, stmt, row_index_len++, col_index_len);

            for (i++ ; i < row_cnt; i++) {

                if (LOGICAL(row)[i%idxlen]) {

                    sqlite3_reset(stmt);

                    sqlite3_bind_int(stmt, 1, i);

                    sqlite3_step(stmt);

                    _add_row_to_df(ret, stmt, row_index_len++, col_index_len);

                }

            }

        }

        sqlite3_finalize(stmt);

        /* shrink vectors */

        if (est_row_cnt > 0 && row_index_len < est_row_cnt) {

            for (i = 0; i < col_index_len; i++) {

                SET_VECTOR_ELT(ret, i, 

                        _shrink_vector(VECTOR_ELT(ret, i), row_index_len));

            }

        }

        UNPROTECT(1); /* for the ret from _setup_df_sexp1 */

    }

    UNUSE_SDF2(iname);

    if (ret != R_NilValue && col_index_len > 1) {

        SET_CLASS(ret, mkString("data.frame"));

        _set_rownames2(ret);

    } else if (ret != R_NilValue && col_index_len == 1) {

        ret = VECTOR_ELT(ret, 0);

    }

    return ret;

}

SEXP sdf_rbind(SEXP sdf, SEXP data) {

    char *class;

    char *iname = SDF_INAME(sdf), *colname;

    SEXP ret = R_NilValue, col, names, levels, rownames;

    int ncols, buflen, buflen2, i, j, res, nrows, *types, rownames_type;

    sqlite3_stmt *stmt;

    const char *type;

    char *rn_str; 

    class = CHAR_ELT(GET_CLASS(data), 0);

    if (strcmp(class,"data.frame") == 0) {

        /* check table names, types. variables may not be in same order, as

         * long as names and types are identical. */

        names = GET_NAMES(data);

        ncols = GET_LENGTH(names);

        buflen = sprintf(g_sql_buf[0], "select 1");

        for (i = 0; i < ncols; i++) {

            _expand_buf(0, buflen + 100);

            buflen += sprintf(g_sql_buf[0]+buflen, ",[%s]", CHAR_ELT(names, i));

        }

        _expand_buf(0, buflen + 100);

        sprintf(g_sql_buf[0]+buflen, " from [%s].sdf_data", iname);

        res = sqlite3_prepare(g_workspace, g_sql_buf[0], -1, &stmt, NULL);

        if (res != SQLITE_OK) { /* column name mismatch */

            _sqlite_error(res);

            Rprintf("Error: column names should exactly match the names of the SDF.\n");

            return ret;

        }

        /* now check the type */

        types = (int *)R_alloc(ncols, sizeof(int));

        for (i = 0; i< ncols; i++) {

            type = sqlite3_column_decltype(stmt, i+1); /* +1 bec 1st col is "1" */

            col = VECTOR_ELT(data, i);

            /* class = CHAR_ELT(GET_CLASS(col),0); */

            if (strcmp(type, "double") == 0 && IS_NUMERIC(col)) types[i] = SQLITE_FLOAT;

            else if (strcmp(type, "text") == 0 && IS_CHARACTER(col)) types[i] = SQLITE_TEXT;

            else if (strcmp(type, "int") == 0) { 

                types[i] = SQLITE_INTEGER;

                if (isUnordered(col)) {  /* test if factor */

                    colname = CHAR_ELT(names, i);

                    sqlite3_stmt *stmt2;

                    if (!_is_factor2(iname, "factor", colname)) break;

                    sprintf(g_sql_buf[1], "[%s].[factor %s]", iname, colname);

                    nrows = _get_row_count2(g_sql_buf[1], 0);

                    /* levels in sdf must be >= levels in df */

                    levels = GET_LEVELS(col);

                    if (nrows < GET_LENGTH(levels)) {

                        Rprintf("Error: The data frame variable %s has more levels than"

                                " its SDF counterpart.\n", colname);

                        break;

                    }

                    sprintf(g_sql_buf[2], "select label from %s order by level", g_sql_buf[1]);

                    res = sqlite3_prepare(g_workspace, g_sql_buf[2], -1, &stmt2, NULL);

                    _sqlite_error(res);

                    for (j = 0; j < GET_LENGTH(levels); j++)  {

                        sqlite3_step(stmt2);

                        if (strcmp((char *)sqlite3_column_text(stmt2, 0), CHAR_ELT(levels, j)) != 0) {

                            Rprintf("Error: Level label mismatch in variable %s, [%s] in data frame"

                                    " vs [%s] in SDF.\n", colname, (char *)sqlite3_column_text(stmt2, 0),

                                    CHAR_ELT(levels, j));

                            sqlite3_finalize(stmt2);

                            break;

                        }

                    }

                    sqlite3_finalize(stmt2);

                } else if (isOrdered(col)) { /* same with ordered */

                    colname = CHAR_ELT(names, i);

                    sqlite3_stmt *stmt2;

                    if (!_is_factor2(iname, "ordered", colname)) break;

                    sprintf(g_sql_buf[1], "[%s].[ordered %s]", iname, colname);

                    nrows = _get_row_count2(g_sql_buf[1], 0);

                    /* levels in sdf must be >= levels in df */

                    levels = GET_LEVELS(col);

                    if (nrows < GET_LENGTH(levels)) {

                        Rprintf("Error: The data frame variable %s has more levels than"

                                " its SDF counterpart.\n", colname);

                        break;

                    }

                    sprintf(g_sql_buf[2], "select label from %s order by level", g_sql_buf[1]);

                    sqlite3_prepare(g_workspace, g_sql_buf[2], -1, &stmt2, NULL);

                    for (j = 0; j < GET_LENGTH(levels); j++)  {

                        sqlite3_step(stmt2);

                        if (strcmp((char *)sqlite3_column_text(stmt2, 0), CHAR_ELT(levels, j)) != 0) {

                            Rprintf("Error: Level label mismatch in variable %s, [%s] in data frame"

                                    " vs [%s] in SDF.\n", colname, (char *)sqlite3_column_text(stmt2, 0),