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4573 6959 d 20 h maechler /trunk/Matrix/ Rsparse validation methods; finally make use of slot_dup() macro; fix R_to_C (symmetric)  
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/man/band.Rd
/trunk/Matrix/man/dgRMatrix-class.Rd
/trunk/Matrix/man/dsRMatrix-class.Rd
/trunk/Matrix/man/dtRMatrix-class-def.Rd
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/TMatrix_as.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ldense.c
4565 6961 d 2 h maechler /trunk/Matrix/ merge 'branches/Matrix-APIchange' back into the trunk  
/trunk/Matrix/src/iohb.c
/trunk/Matrix/src/iohb.h
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/inst/doc/Comparisons.Rnw
/trunk/Matrix/inst/include/Matrix.h
/trunk/Matrix/inst/include/Matrix_stubs.c
/trunk/Matrix/src/CHMfactor.c
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/HBMM.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/cs_utils.c
/trunk/Matrix/src/cs_utils.h
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/factorizations.c
/trunk/Matrix/src/sparseQR.c
/trunk/Matrix/src/t_gCMatrix_colSums.c
4198 7065 d 4 h maechler /trunk/Matrix/ better dtC inversion from Kasper K  
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/tests/matprod.R
4093 7125 d 2 h maechler /trunk/Matrix/src/ + SET_Dimnames; more dimnames setting and other cosmetic  
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/cs_utils.c
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
4055 7153 d 3 h maechler /trunk/Matrix/ more "[<-" fixes; validity of triangular sparse  
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/man/Subassign-methods.Rd
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtTMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
/trunk/Matrix/tests/simple.R
3944 7207 d 6 h maechler /trunk/Matrix/ 2nd round of cleanup for <sparse>_validate()  
/trunk/Matrix/src/lgTMatrix.c
/trunk/Matrix/src/lgTMatrix.h
/trunk/Matrix/src/lsCMatrix.c
/trunk/Matrix/src/lsCMatrix.h
/trunk/Matrix/src/ltCMatrix.c
/trunk/Matrix/src/ltCMatrix.h
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dsTMatrix.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtTMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lgCMatrix.c
3717 7263 d 15 h bates /trunk/Matrix/src/ Cleanup  
/trunk/Matrix/src/HBMM.c
/trunk/Matrix/src/HBMM.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtrMatrix.c
3678 7266 d 0 h bates /trunk/Matrix/ Merging changes from Matrix-nolmer branch  
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/pedigree.R
/trunk/Matrix/data/sleepstudy.rda
/trunk/Matrix/man/BIC.Rd
/trunk/Matrix/man/VarCorr-class.Rd
/trunk/Matrix/man/VarCorr.Rd
/trunk/Matrix/man/fixef.Rd
/trunk/Matrix/man/hatTrace.Rd
/trunk/Matrix/man/lmer-class.Rd
/trunk/Matrix/man/lmer.Rd
/trunk/Matrix/man/mcmcsamp.Rd
/trunk/Matrix/man/pedigree-class.Rd
/trunk/Matrix/man/pedigree.Rd
/trunk/Matrix/man/ranef.Rd
/trunk/Matrix/man/sleepstudy.Rd
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
/trunk/Matrix/src/pedigree.c
/trunk/Matrix/src/pedigree.h
/trunk/Matrix/tests/lmer.R
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/Syms.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ltCMatrix.c
/trunk/Matrix/src/ltCMatrix.h
3423 7283 d 20 h bates /trunk/Matrix/src/ Remove code that is no longer used  
/trunk/Matrix/src/dtCMatrix.c
3292 7326 d 3 h bates /trunk/Matrix/src/ Remove definitions of unused identifiers  
/trunk/Matrix/src/dtCMatrix.c
3112 7393 d 3 h bates /trunk/Matrix/ Add special solve method for unit upper triangular matrices  
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
3070 7408 d 6 h bates /trunk/Matrix/ Add CSparse-based solve methods for dtCMatrix class  
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
3065 7409 d 21 h bates /trunk/Matrix/src/ C code for inverse of sparse, unit, lower triangular matrices (pattern only at present)  
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
2265 7487 d 19 h bates /trunk/Matrix/ Use coersion for transpose of dtCMatrix class  
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
1862 7607 d 6 h maechler /trunk/Matrix/src/ use uplo_P() and diag_P() macros instead of *_value() functions  
/trunk/Matrix/src/HBMM.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/lgCMatrix.c
/trunk/Matrix/src/lsCMatrix.c
/trunk/Matrix/src/ltCMatrix.c
1856 7607 d 10 h maechler /trunk/Matrix/src/ + logical dense matrices; more coercions  
/trunk/Matrix/src/ldense.c
/trunk/Matrix/src/ldense.h
/trunk/Matrix/src/LDL/Makefile
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/dsTMatrix.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtTMatrix.h
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/init.c
1786 7631 d 21 h maechler /trunk/Matrix/src/ cosmetic, comment  
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/lgCMatrix.c
1781 7634 d 1 h maechler /trunk/Matrix/ add triangularMatrix_validate and symmetric* to C code and make (re!)use of it - not quite everywhere?  
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dpoMatrix.Rout.save
1539 7741 d 1 h bates /trunk/Matrix/src/ collapse some constructions in the code  
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dtCMatrix.c
1315 7791 d 5 h bates /trunk/Matrix/ Added dgRMatrix methods and documentation  
/trunk/Matrix/R/dgRMatrix.R
/trunk/Matrix/man/dgRMatrix-class.Rd
/trunk/Matrix/INDEX
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/init.c

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