R-packages – /branches/Matrix-nolmer/src/DEPS.mkf

Rev 3570 – Move lmer back to lme4

bates — Mon, 04 Sep 2006 16:01:11 +0000

bates – 12 file(s) modified
Move lmer back to lme4

~ /branches/Matrix-nolmer/ChangeLog
~ /branches/Matrix-nolmer/DESCRIPTION
~ /branches/Matrix-nolmer/R/AllClass.R
~ /branches/Matrix-nolmer/R/dtCMatrix.R
~ /branches/Matrix-nolmer/src/DEPS.mkf
~ /branches/Matrix-nolmer/src/dtCMatrix.c
~ /branches/Matrix-nolmer/src/dtCMatrix.h
~ /branches/Matrix-nolmer/src/init.c
~ /branches/Matrix-nolmer/src/ltCMatrix.c
~ /branches/Matrix-nolmer/src/ltCMatrix.h
~ /branches/Matrix-nolmer/src/Mutils.c
~ /branches/Matrix-nolmer/src/Mutils.h

Rev 3562 – Update C and R code and man pages and NAMESPACE

bates — Sat, 02 Sep 2006 23:13:55 +0000

bates – 10 file(s) modified
Update C and R code and man pages and NAMESPACE

~ /branches/Matrix-nolmer/DESCRIPTION
~ /branches/Matrix-nolmer/INDEX
x /branches/Matrix-nolmer/man/BIC.Rd
x /branches/Matrix-nolmer/man/mcmcsamp.Rd
~ /branches/Matrix-nolmer/NAMESPACE
x /branches/Matrix-nolmer/R/pedigree.R
~ /branches/Matrix-nolmer/src/DEPS.mkf
~ /branches/Matrix-nolmer/src/init.c
~ /branches/Matrix-nolmer/src/Syms.h
x /branches/Matrix-nolmer/tests/lmer.R

Rev 3548 – New branch for bringing lmer C code back into lme4

bates — Sat, 02 Sep 2006 19:06:55 +0000

bates – 1 file(s) modified
New branch for bringing lmer C code back into lme4

+ /branches/Matrix-nolmer (copied from /trunk/Matrix@3547)

Rev 3490 – Replaced R_ldl etc. by CHOLMOD functions

bates — Thu, 24 Aug 2006 18:23:36 +0000

bates – 1 file(s) modified
Replaced R_ldl etc. by CHOLMOD functions

~ /trunk/Matrix/src/DEPS.mkf

Rev 2173 – Remove dgBCMatrix.[ch] and dependencies

bates — Thu, 12 Jan 2006 03:10:29 +0000

bates – 4 file(s) modified
Remove dgBCMatrix.[ch] and dependencies

~ /trunk/Matrix/src/DEPS.mkf
x /trunk/Matrix/src/dgBCMatrix.c
x /trunk/Matrix/src/dgBCMatrix.h
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 1923 – Remove references to Pattern.[ch]

bates — Tue, 11 Oct 2005 15:18:23 +0000

bates – 1 file(s) modified
Remove references to Pattern.[ch]

~ /trunk/Matrix/src/DEPS.mkf

Rev 1840 – Updated DEPS.mkf and some include files

bates — Mon, 19 Sep 2005 23:04:52 +0000

bates – 4 file(s) modified
Updated DEPS.mkf and some include files

~ /trunk/Matrix/src/dense.h
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/lmer.h
~ /trunk/Matrix/src/Makefile.win

Rev 1548 – Release 0.95-10

bates — Fri, 20 May 2005 03:17:14 +0000

bates – 9 file(s) modified
Release 0.95-10

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/SOURCES_C.mkf
x /trunk/Matrix/src/sscCrosstab.c
x /trunk/Matrix/src/sscCrosstab.h
x /trunk/Matrix/src/ssclme.c
x /trunk/Matrix/src/ssclme.h

Rev 1543 – Fold bCrosstab.[ch] into lmer.[ch]

bates — Tue, 17 May 2005 18:34:27 +0000

bates – 1 file(s) modified
Fold bCrosstab.[ch] into lmer.[ch]

~ /trunk/Matrix/src/DEPS.mkf

Rev 1269 – Coercions and methods for dppMatrix and dspMatrix classes

bates — Tue, 15 Mar 2005 00:44:02 +0000

bates – 2 file(s) modified
Coercions and methods for dppMatrix and dspMatrix classes

~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 1202 – C functions for dtpMatrix class

bates — Thu, 03 Mar 2005 05:16:09 +0000

bates – 5 file(s) modified
C functions for dtpMatrix class

~ /trunk/Matrix/src/DEPS.mkf
+ /trunk/Matrix/src/dtpMatrix.c
+ /trunk/Matrix/src/dtpMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 1190 – Internationalization and localization

bates — Mon, 28 Feb 2005 18:15:21 +0000

bates – 42 file(s) modified
Internationalization and localization

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/Doxyfile
+ /trunk/Matrix/inst/po
+ /trunk/Matrix/inst/po/LL
+ /trunk/Matrix/inst/po/LL/LC_MESSAGES
+ /trunk/Matrix/inst/po/LL/LC_MESSAGES/Matrix.mo
+ /trunk/Matrix/inst/po/LL/LC_MESSAGES/R-Matrix.mo
+ /trunk/Matrix/po
+ /trunk/Matrix/po/Matrix.pot
+ /trunk/Matrix/po/R-Matrix.pot
~ /trunk/Matrix/src/bCrosstab.c
x /trunk/Matrix/src/cblas.h
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/dgBCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dpoMatrix.c
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsTMatrix.c
~ /trunk/Matrix/src/dsyMatrix.c
~ /trunk/Matrix/src/dtCMatrix.c
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/dtTMatrix.c
~ /trunk/Matrix/src/factorizations.c
~ /trunk/Matrix/src/factorizations.h
x /trunk/Matrix/src/flame.c
x /trunk/Matrix/src/flame.h
~ /trunk/Matrix/src/init.c
x /trunk/Matrix/src/ldl.c
x /trunk/Matrix/src/ldl.h
~ /trunk/Matrix/src/lmer.c
x /trunk/Matrix/src/LU.c
x /trunk/Matrix/src/LU.h
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h
~ /trunk/Matrix/src/SOURCES_C.mkf
~ /trunk/Matrix/src/sscCrosstab.c
~ /trunk/Matrix/src/ssclme.c
~ /trunk/Matrix/src/triplet_to_col.c
~ /trunk/Matrix/src/triplet_to_col.h

Rev 1110 – Coercions and methods for the dsTMatrix class

bates — Thu, 17 Feb 2005 01:18:02 +0000

bates – 9 file(s) modified
Coercions and methods for the dsTMatrix class

+ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/src/DEPS.mkf
+ /trunk/Matrix/src/dsTMatrix.c
+ /trunk/Matrix/src/dsTMatrix.h
~ /trunk/Matrix/src/dtTMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 1090 – Methods and coercions for the dtTMatrix class

bates — Tue, 15 Feb 2005 22:09:12 +0000

bates – 4 file(s) modified
Methods and coercions for the dtTMatrix class

~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 990 – renaming and rearranging classes

bates — Wed, 02 Feb 2005 19:40:26 +0000

bates – 5 file(s) modified
renaming and rearranging classes

~ /trunk/Matrix/INDEX
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/SOURCES_C.mkf
~ /trunk/Matrix/tests/dpoMatrix.R
~ /trunk/Matrix/TODO

Rev 987 – renaming and rearranging classes

bates — Wed, 02 Feb 2005 19:11:51 +0000

bates – 28 file(s) modified
renaming and rearranging classes

~ /trunk/Matrix/src/bCrosstab.c
~ /trunk/Matrix/src/bCrosstab.h
+ /trunk/Matrix/src/dCholCMatrix.c (copied from /trunk/Matrix/src/sscChol.c@982)
+ /trunk/Matrix/src/dCholCMatrix.h (copied from /trunk/Matrix/src/sscChol.h@982)
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/dgBCMatrix.c
~ /trunk/Matrix/src/dgBCMatrix.h
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dgTMatrix.h
x /trunk/Matrix/src/dgTMatrix_to_dgCMatrix.c
x /trunk/Matrix/src/dgTMatrix_to_dgCMatrix.h
~ /trunk/Matrix/src/dpoMatrix.c
~ /trunk/Matrix/src/dpoMatrix.h
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/SOURCES_C.mkf
x /trunk/Matrix/src/sscChol.c
x /trunk/Matrix/src/sscChol.h
~ /trunk/Matrix/src/sscCrosstab.c
~ /trunk/Matrix/src/sscCrosstab.h
+ /trunk/Matrix/src/triplet_to_col.c (copied from /trunk/Matrix/src/dgTMatrix_to_dgCMatrix.c@982)
+ /trunk/Matrix/src/triplet_to_col.h (copied from /trunk/Matrix/src/dgTMatrix_to_dgCMatrix.h@982)

Rev 978 – Renaming and reorganizing classes

bates — Wed, 02 Feb 2005 14:52:26 +0000

bates – 38 file(s) modified
Renaming and reorganizing classes

x /trunk/Matrix/src/cscMatrix.c
x /trunk/Matrix/src/cscMatrix.h
~ /trunk/Matrix/src/DEPS.mkf
+ /trunk/Matrix/src/dgCMatrix.c (copied from /trunk/Matrix/src/cscMatrix.c@977)
+ /trunk/Matrix/src/dgCMatrix.h (copied from /trunk/Matrix/src/cscMatrix.h@977)
+ /trunk/Matrix/src/dgeMatrix.c (copied from /trunk/Matrix/src/geMatrix.c@977)
+ /trunk/Matrix/src/dgeMatrix.h (copied from /trunk/Matrix/src/geMatrix.h@977)
+ /trunk/Matrix/src/dgTMatrix.c (copied from /trunk/Matrix/src/triplet.c@977)
+ /trunk/Matrix/src/dgTMatrix.h (copied from /trunk/Matrix/src/triplet.h@977)
+ /trunk/Matrix/src/dgTMatrix_to_dgCMatrix.c (copied from /trunk/Matrix/src/triplet_to_col.c@977)
+ /trunk/Matrix/src/dgTMatrix_to_dgCMatrix.h (copied from /trunk/Matrix/src/triplet_to_col.h@977)
+ /trunk/Matrix/src/dpoMatrix.c (copied from /trunk/Matrix/src/poMatrix.c@977)
+ /trunk/Matrix/src/dpoMatrix.h (copied from /trunk/Matrix/src/poMatrix.h@977)
+ /trunk/Matrix/src/dsCMatrix.c (copied from /trunk/Matrix/src/sscMatrix.c@977)
+ /trunk/Matrix/src/dsCMatrix.h (copied from /trunk/Matrix/src/sscMatrix.h@977)
+ /trunk/Matrix/src/dsyMatrix.c (copied from /trunk/Matrix/src/syMatrix.c@977)
+ /trunk/Matrix/src/dsyMatrix.h (copied from /trunk/Matrix/src/syMatrix.h@977)
+ /trunk/Matrix/src/dtCMatrix.c (copied from /trunk/Matrix/src/tscMatrix.c@977)
+ /trunk/Matrix/src/dtCMatrix.h (copied from /trunk/Matrix/src/tscMatrix.h@977)
+ /trunk/Matrix/src/dtrMatrix.c (copied from /trunk/Matrix/src/trMatrix.c@977)
+ /trunk/Matrix/src/dtrMatrix.h (copied from /trunk/Matrix/src/trMatrix.h@977)
x /trunk/Matrix/src/geMatrix.c
x /trunk/Matrix/src/geMatrix.h
x /trunk/Matrix/src/poMatrix.c
x /trunk/Matrix/src/poMatrix.h
~ /trunk/Matrix/src/SOURCES_C.mkf
x /trunk/Matrix/src/sscMatrix.c
x /trunk/Matrix/src/sscMatrix.h
x /trunk/Matrix/src/syMatrix.c
x /trunk/Matrix/src/syMatrix.h
x /trunk/Matrix/src/triplet.c
x /trunk/Matrix/src/triplet.h
x /trunk/Matrix/src/triplet_to_col.c
x /trunk/Matrix/src/triplet_to_col.h
x /trunk/Matrix/src/trMatrix.c
x /trunk/Matrix/src/trMatrix.h
x /trunk/Matrix/src/tscMatrix.c
x /trunk/Matrix/src/tscMatrix.h

Rev 885 – Change to the lmer representation

bates — Mon, 03 Jan 2005 19:14:22 +0000

bates – 4 file(s) modified
Change to the lmer representation

~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 806 – R-specific versions of ldl

bates — Sun, 05 Dec 2004 13:50:54 +0000

bates – 2 file(s) modified
R-specific versions of ldl

~ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 777 – Extract dependencies to an include file

bates — Sat, 27 Nov 2004 01:44:15 +0000

bates – 3 file(s) modified
Extract dependencies to an include file

+ /trunk/Matrix/src/DEPS.mkf
~ /trunk/Matrix/src/Makefile
~ /trunk/Matrix/src/Makefile.win