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2027 7547 d 20 h bates /branches/Matrix-mer2/ Merge updates to Matrix package  
/branches/Matrix-mer2/man/simulate.Rd
/branches/Matrix-mer2/R/Csparse.R
/branches/Matrix-mer2/R/Tsparse.R
/branches/Matrix-mer2/R/denseMatrix.R
/branches/Matrix-mer2/R/zzz.R
/branches/Matrix-mer2/inst/doc/Comparisons.Rnw
/branches/Matrix-mer2/man/CsparseMatrix-class.Rd
/branches/Matrix-mer2/man/TsparseMatrix-class.Rd
/branches/Matrix-mer2/man/denseMatrix-class.Rd
/branches/Matrix-mer2/man/dgeMatrix-class.Rd
/branches/Matrix-mer2/src/Csparse.c
/branches/Matrix-mer2/src/Csparse.h
/branches/Matrix-mer2/src/Makefile
/branches/Matrix-mer2/src/Makefile.win
/branches/Matrix-mer2/src/Tsparse.c
/branches/Matrix-mer2/src/dense.c
/branches/Matrix-mer2/src/dense.h
/branches/Matrix-mer2/src/dgCMatrix.c
/branches/Matrix-mer2/src/dgTMatrix.c
/branches/Matrix-mer2/src/dsCMatrix.c
/branches/Matrix-mer2/src/init.c
/branches/Matrix-mer2/tests/matprod.R
1929 7583 d 17 h bates /branches/Matrix-mer2/ Incorporating CHOLMOD-based lmer  
/branches/Matrix-mer2
1869 7604 d 19 h maechler /trunk/Matrix/ more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ...  
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgeMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/R/zzz.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dCholCMatrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/denseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/dtpMatrix-class.Rd
/trunk/Matrix/man/dtrMatrix-class.Rd
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/ltrMatrix-class.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
/trunk/Matrix/src/Makefile
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/base-matrix-fun.R
/trunk/Matrix/tests/dg_Matrix.R
/trunk/Matrix/tests/group-methods.R
/trunk/Matrix/tests/simple.R
1856 7607 d 4 h maechler /trunk/Matrix/src/ + logical dense matrices; more coercions  
/trunk/Matrix/src/ldense.c
/trunk/Matrix/src/ldense.h
/trunk/Matrix/src/LDL/Makefile
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/dsTMatrix.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtTMatrix.h
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/init.c
1830 7616 d 20 h bates /trunk/Matrix/ Added CHOLMOD-based C functions. Still need methods defined in R and some error checking  
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/Tsparse.h
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/src/Pattern.c
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/UMFPACK/Makefile
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/init.c
1827 7618 d 19 h maechler /trunk/Matrix/ new compressed_non_0_ij()  
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
1786 7631 d 15 h maechler /trunk/Matrix/src/ cosmetic, comment  
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/lgCMatrix.c
1781 7633 d 19 h maechler /trunk/Matrix/ add triangularMatrix_validate and symmetric* to C code and make (re!)use of it - not quite everywhere?  
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dpoMatrix.Rout.save
1568 7720 d 21 h bates /trunk/Matrix/ Fix matrix multiplication methods  
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
1539 7740 d 19 h bates /trunk/Matrix/src/ collapse some constructions in the code  
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dtCMatrix.c
1515 7745 d 22 h bates /trunk/Matrix/ Release 0.95-9  
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/lgCMatrix.c
1321 7787 d 20 h bates /trunk/Matrix/ Moving methods for operations with numeric to the Matrix class and with integer to the dMatrix class  
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dpoMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/init.c
1317 7788 d 22 h bates /trunk/Matrix/src/ Rename expand_column_pointers to expand_cmpPt (expand compressed pointers)  
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/bCrosstab.c
/trunk/Matrix/src/dgBCMatrix.c
/trunk/Matrix/src/dgCMatrix.c
1315 7790 d 23 h bates /trunk/Matrix/ Added dgRMatrix methods and documentation  
/trunk/Matrix/R/dgRMatrix.R
/trunk/Matrix/man/dgRMatrix-class.Rd
/trunk/Matrix/INDEX
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/init.c
1199 7816 d 18 h bates /trunk/Matrix/src/ shorten csc_components_transpose to csc_compTr  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/sscCrosstab.c
1190 7818 d 18 h bates /trunk/Matrix/ Internationalization and localization  
/trunk/Matrix/inst/po
/trunk/Matrix/inst/po/LL
/trunk/Matrix/inst/po/LL/LC_MESSAGES
/trunk/Matrix/inst/po/LL/LC_MESSAGES/Matrix.mo
/trunk/Matrix/inst/po/LL/LC_MESSAGES/R-Matrix.mo
/trunk/Matrix/po
/trunk/Matrix/po/Matrix.pot
/trunk/Matrix/po/R-Matrix.pot
/trunk/Matrix/src/LU.c
/trunk/Matrix/src/LU.h
/trunk/Matrix/src/cblas.h
/trunk/Matrix/src/flame.c
/trunk/Matrix/src/flame.h
/trunk/Matrix/src/ldl.c
/trunk/Matrix/src/ldl.h
/trunk/Matrix/ChangeLog
/trunk/Matrix/Doxyfile
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/bCrosstab.c
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgBCMatrix.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/factorizations.c
/trunk/Matrix/src/factorizations.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/sscCrosstab.c
/trunk/Matrix/src/ssclme.c
/trunk/Matrix/src/triplet_to_col.c
/trunk/Matrix/src/triplet_to_col.h
1044 7839 d 4 h maechler /trunk/Matrix/src/ use mkString(); "uplo" and "diag" must be uppercase  
/trunk/Matrix/src/LU.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/sscCrosstab.c
991 7843 d 22 h bates /trunk/Matrix/ Getting package to pass CMD check  
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/INDEX
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/inst/doc/Comparisons.Rnw
/trunk/Matrix/inst/doc/Introduction.Rnw
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/man/tcrossprod.Rd
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/tests/dpoMatrix.Rout.save
987 7844 d 18 h bates /trunk/Matrix/src/ renaming and rearranging classes  
/trunk/Matrix/src/dCholCMatrix.c
/trunk/Matrix/src/dCholCMatrix.h
/trunk/Matrix/src/triplet_to_col.c
/trunk/Matrix/src/triplet_to_col.h
/trunk/Matrix/src/dgTMatrix_to_dgCMatrix.c
/trunk/Matrix/src/dgTMatrix_to_dgCMatrix.h
/trunk/Matrix/src/sscChol.c
/trunk/Matrix/src/sscChol.h
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/bCrosstab.c
/trunk/Matrix/src/bCrosstab.h
/trunk/Matrix/src/dgBCMatrix.c
/trunk/Matrix/src/dgBCMatrix.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dpoMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
/trunk/Matrix/src/sscCrosstab.c
/trunk/Matrix/src/sscCrosstab.h
978 7844 d 22 h bates /trunk/Matrix/src/ Renaming and reorganizing classes  
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dgTMatrix_to_dgCMatrix.c
/trunk/Matrix/src/dgTMatrix_to_dgCMatrix.h
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dpoMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/dtrMatrix.h
/trunk/Matrix/src/cscMatrix.c
/trunk/Matrix/src/cscMatrix.h
/trunk/Matrix/src/geMatrix.c
/trunk/Matrix/src/geMatrix.h
/trunk/Matrix/src/poMatrix.c
/trunk/Matrix/src/poMatrix.h
/trunk/Matrix/src/sscMatrix.c
/trunk/Matrix/src/sscMatrix.h
/trunk/Matrix/src/syMatrix.c
/trunk/Matrix/src/syMatrix.h
/trunk/Matrix/src/trMatrix.c
/trunk/Matrix/src/trMatrix.h
/trunk/Matrix/src/triplet.c
/trunk/Matrix/src/triplet.h
/trunk/Matrix/src/triplet_to_col.c
/trunk/Matrix/src/triplet_to_col.h
/trunk/Matrix/src/tscMatrix.c
/trunk/Matrix/src/tscMatrix.h
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/SOURCES_C.mkf

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