R-packages – /branches/Matrix-mer2/src/Csparse.c

Rev 2143 – Use Calloc, not malloc in chm_common.c and Free, not free ...

bates — Thu, 05 Jan 2006 23:10:06 +0000

bates – 5 file(s) modified
Use Calloc, not malloc in chm_common.c and Free, not free elsewhere

~ /branches/Matrix-mer2/src/chm_common.c
~ /branches/Matrix-mer2/src/chm_common.h
~ /branches/Matrix-mer2/src/Csparse.c
~ /branches/Matrix-mer2/src/dense.c
~ /branches/Matrix-mer2/src/lmer.c

Rev 2028 – Added crossprod method for Csparse and dense

bates — Mon, 28 Nov 2005 16:25:33 +0000

bates – 3 file(s) modified
Added crossprod method for Csparse and dense

~ /branches/Matrix-mer2/src/Csparse.c
~ /branches/Matrix-mer2/src/Csparse.h
~ /branches/Matrix-mer2/src/init.c

Rev 2027 – Merge updates to Matrix package

bates — Sat, 26 Nov 2005 16:37:27 +0000

bates – 22 file(s) modified
Merge updates to Matrix package

~ /branches/Matrix-mer2/inst/doc/Comparisons.Rnw
~ /branches/Matrix-mer2/man/CsparseMatrix-class.Rd
~ /branches/Matrix-mer2/man/denseMatrix-class.Rd
~ /branches/Matrix-mer2/man/dgeMatrix-class.Rd
x /branches/Matrix-mer2/man/simulate.Rd
~ /branches/Matrix-mer2/man/TsparseMatrix-class.Rd
~ /branches/Matrix-mer2/R/Csparse.R
~ /branches/Matrix-mer2/R/denseMatrix.R
~ /branches/Matrix-mer2/R/Tsparse.R
~ /branches/Matrix-mer2/R/zzz.R
~ /branches/Matrix-mer2/src/Csparse.c
~ /branches/Matrix-mer2/src/Csparse.h
~ /branches/Matrix-mer2/src/dense.c
~ /branches/Matrix-mer2/src/dense.h
~ /branches/Matrix-mer2/src/dgCMatrix.c
~ /branches/Matrix-mer2/src/dgTMatrix.c
~ /branches/Matrix-mer2/src/dsCMatrix.c
~ /branches/Matrix-mer2/src/init.c
~ /branches/Matrix-mer2/src/Makefile
~ /branches/Matrix-mer2/src/Makefile.win
~ /branches/Matrix-mer2/src/Tsparse.c
~ /branches/Matrix-mer2/tests/matprod.R

Rev 1929 – Incorporating CHOLMOD-based lmer

bates — Fri, 21 Oct 2005 19:33:37 +0000

bates – 1 file(s) modified
Incorporating CHOLMOD-based lmer

+ /branches/Matrix-mer2 (copied from /trunk/Matrix@1928)

Rev 1870 – check return value from cholmod_aat() {fix seg.fault}

maechler — Sat, 01 Oct 2005 20:08:04 +0000

maechler – 1 file(s) modified
check return value from cholmod_aat() {fix seg.fault}

~ /trunk/Matrix/src/Csparse.c

Rev 1838 – corrected error message

bates — Mon, 19 Sep 2005 21:29:37 +0000

bates – 1 file(s) modified
corrected error message

~ /trunk/Matrix/src/Csparse.c

Rev 1836 – crossprod and tcrossprod for Tsparse

bates — Mon, 19 Sep 2005 21:10:59 +0000

bates – 8 file(s) modified
crossprod and tcrossprod for Tsparse

~ /trunk/Matrix/INDEX
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/matprod.R

Rev 1833 – too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for ...

maechler — Mon, 19 Sep 2005 19:01:31 +0000

maechler – 44 file(s) modified
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/inst/test-tools.R
+ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
+ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsparseMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/tests/bind.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/dgTMatrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matprod.R

Rev 1831 – More progress on incorporating CHOLMOD - still not passing CMD ...

bates — Sun, 18 Sep 2005 23:41:45 +0000

bates – 10 file(s) modified
More progress on incorporating CHOLMOD - still not passing CMD check

~ /trunk/Matrix/NAMESPACE
+ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/dtCMatrix.R
x /trunk/Matrix/R/gTMatrix.R
~ /trunk/Matrix/R/lsparseMatrix.R
+ /trunk/Matrix/R/Tsparse.R (copied from /trunk/Matrix/R/gTMatrix.R@1828)
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/dgTMatrix.R

Rev 1830 – Added CHOLMOD-based C functions. Still need methods defined in ...

bates — Sun, 18 Sep 2005 16:33:54 +0000

bates – 17 file(s) modified
Added CHOLMOD-based C functions. Still need methods defined in R and some error checking

~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/chm_common.h
+ /trunk/Matrix/src/Csparse.c
+ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Pattern.c
~ /trunk/Matrix/src/SOURCES_C.mkf
+ /trunk/Matrix/src/Tsparse.c
+ /trunk/Matrix/src/Tsparse.h
~ /trunk/Matrix/src/UMFPACK/Makefile