R-packages – /branches/Matrix-mer2/R/dgeMatrix.R

Rev 2141 – Package name as Matrix, not Matrix.new

bates — Thu, 05 Jan 2006 23:07:20 +0000

bates – 26 file(s) modified
Package name as Matrix, not Matrix.new

~ /branches/Matrix-mer2/R/Auxiliaries.R
~ /branches/Matrix-mer2/R/Csparse.R
~ /branches/Matrix-mer2/R/denseMatrix.R
~ /branches/Matrix-mer2/R/dgCMatrix.R
~ /branches/Matrix-mer2/R/dgeMatrix.R
~ /branches/Matrix-mer2/R/dgRMatrix.R
~ /branches/Matrix-mer2/R/dpoMatrix.R
~ /branches/Matrix-mer2/R/dppMatrix.R
~ /branches/Matrix-mer2/R/dsCMatrix.R
~ /branches/Matrix-mer2/R/dspMatrix.R
~ /branches/Matrix-mer2/R/dsTMatrix.R
~ /branches/Matrix-mer2/R/dsyMatrix.R
~ /branches/Matrix-mer2/R/dtCMatrix.R
~ /branches/Matrix-mer2/R/dtpMatrix.R
~ /branches/Matrix-mer2/R/dtrMatrix.R
~ /branches/Matrix-mer2/R/dtTMatrix.R
~ /branches/Matrix-mer2/R/eigen.R
~ /branches/Matrix-mer2/R/lCholCMatrix.R
~ /branches/Matrix-mer2/R/ldenseMatrix.R
~ /branches/Matrix-mer2/R/lgTMatrix.R
~ /branches/Matrix-mer2/R/lmer.R
~ /branches/Matrix-mer2/R/lsCMatrix.R
~ /branches/Matrix-mer2/R/ltCMatrix.R
~ /branches/Matrix-mer2/R/LU.R
~ /branches/Matrix-mer2/R/sparseMatrix.R
~ /branches/Matrix-mer2/R/Tsparse.R

Rev 2127 – Merging (not entirely successfully)

bates — Wed, 04 Jan 2006 21:31:47 +0000

bates – 34 file(s) modified
Merging (not entirely successfully)

~ /branches/Matrix-mer2/R/AllClass.R
~ /branches/Matrix-mer2/R/AllGeneric.R
~ /branches/Matrix-mer2/R/Auxiliaries.R
~ /branches/Matrix-mer2/R/Csparse.R
~ /branches/Matrix-mer2/R/denseMatrix.R
~ /branches/Matrix-mer2/R/dgCMatrix.R
~ /branches/Matrix-mer2/R/dgeMatrix.R
~ /branches/Matrix-mer2/R/dgRMatrix.R
+ /branches/Matrix-mer2/R/diagMatrix.R (copied from /trunk/Matrix/R/diagMatrix.R@2124)
~ /branches/Matrix-mer2/R/dpoMatrix.R
~ /branches/Matrix-mer2/R/dppMatrix.R
~ /branches/Matrix-mer2/R/dsCMatrix.R
~ /branches/Matrix-mer2/R/dspMatrix.R
~ /branches/Matrix-mer2/R/dsTMatrix.R
~ /branches/Matrix-mer2/R/dsyMatrix.R
~ /branches/Matrix-mer2/R/dtCMatrix.R
~ /branches/Matrix-mer2/R/dtpMatrix.R
~ /branches/Matrix-mer2/R/dtrMatrix.R
~ /branches/Matrix-mer2/R/dtTMatrix.R
~ /branches/Matrix-mer2/R/eigen.R
~ /branches/Matrix-mer2/R/lCholCMatrix.R
~ /branches/Matrix-mer2/R/ldenseMatrix.R
~ /branches/Matrix-mer2/R/lgTMatrix.R
~ /branches/Matrix-mer2/R/lmer.R
~ /branches/Matrix-mer2/R/lsCMatrix.R
~ /branches/Matrix-mer2/R/ltCMatrix.R
+ /branches/Matrix-mer2/R/ltTMatrix.R (copied from /trunk/Matrix/R/ltTMatrix.R@2124)
~ /branches/Matrix-mer2/R/LU.R
~ /branches/Matrix-mer2/R/Matrix.R
~ /branches/Matrix-mer2/R/sparseMatrix.R
~ /branches/Matrix-mer2/R/Tsparse.R
~ /branches/Matrix-mer2/src/dgeMatrix.c
~ /branches/Matrix-mer2/src/dgeMatrix.h
~ /branches/Matrix-mer2/src/init.c

Rev 2066 – Change generic for tcrossprod and calculation in mer_gradComp

bates — Sun, 11 Dec 2005 20:22:45 +0000

bates – 9 file(s) modified
Change generic for tcrossprod and calculation in mer_gradComp

~ /branches/Matrix-mer2/R/AllGeneric.R
~ /branches/Matrix-mer2/R/Csparse.R
~ /branches/Matrix-mer2/R/ddenseMatrix.R
~ /branches/Matrix-mer2/R/dgCMatrix.R
~ /branches/Matrix-mer2/R/dgeMatrix.R
~ /branches/Matrix-mer2/R/dgTMatrix.R
~ /branches/Matrix-mer2/R/lgCMatrix.R
~ /branches/Matrix-mer2/R/Tsparse.R
~ /branches/Matrix-mer2/src/lmer.c

Rev 2000 – Merging from trunk -r 1996:1999

bates — Fri, 11 Nov 2005 21:34:57 +0000

bates – 27 file(s) modified
Merging from trunk -r 1996:1999

~ /branches/Matrix-mer2/R/AllClass.R
~ /branches/Matrix-mer2/R/bCrosstab.R
~ /branches/Matrix-mer2/R/dgBCMatrix.R
~ /branches/Matrix-mer2/R/dgCMatrix.R
~ /branches/Matrix-mer2/R/dgeMatrix.R
~ /branches/Matrix-mer2/R/dgRMatrix.R
~ /branches/Matrix-mer2/R/dgTMatrix.R
~ /branches/Matrix-mer2/R/dpoMatrix.R
~ /branches/Matrix-mer2/R/dppMatrix.R
~ /branches/Matrix-mer2/R/dsCMatrix.R
~ /branches/Matrix-mer2/R/dspMatrix.R
~ /branches/Matrix-mer2/R/dsTMatrix.R
~ /branches/Matrix-mer2/R/dsyMatrix.R
~ /branches/Matrix-mer2/R/dtCMatrix.R
~ /branches/Matrix-mer2/R/dtpMatrix.R
~ /branches/Matrix-mer2/R/dtrMatrix.R
~ /branches/Matrix-mer2/R/dtTMatrix.R
~ /branches/Matrix-mer2/R/eigen.R
~ /branches/Matrix-mer2/R/lCholCMatrix.R
~ /branches/Matrix-mer2/R/ldenseMatrix.R
~ /branches/Matrix-mer2/R/lgCMatrix.R
~ /branches/Matrix-mer2/R/lgTMatrix.R
~ /branches/Matrix-mer2/R/lsCMatrix.R
~ /branches/Matrix-mer2/R/ltCMatrix.R
~ /branches/Matrix-mer2/R/LU.R
~ /branches/Matrix-mer2/R/pdmatrix.R
~ /branches/Matrix-mer2/R/sparseMatrix.R

Rev 1929 – Incorporating CHOLMOD-based lmer

bates — Fri, 21 Oct 2005 19:33:37 +0000

bates – 1 file(s) modified
Incorporating CHOLMOD-based lmer

+ /branches/Matrix-mer2 (copied from /trunk/Matrix@1928)

Rev 1905 – comments and more (hidden) as.Matrix utilities

maechler — Fri, 07 Oct 2005 20:13:24 +0000

maechler – 1 file(s) modified
comments and more (hidden) as.Matrix utilities

~ /trunk/Matrix/R/dgeMatrix.R

Rev 1869 – more coercions; particularly "d" <-> "l"; more tests (and more ...

maechler — Fri, 30 Sep 2005 17:28:00 +0000

maechler – 45 file(s) modified
more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ...

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/denseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/ldenseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/zzz.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Makefile
~ /trunk/Matrix/tests/base-matrix-fun.R
~ /trunk/Matrix/tests/dg_Matrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 1857 – some "Summary" methods; some "Compare" group methods; logical dense matrices

maechler — Wed, 28 Sep 2005 08:56:42 +0000

maechler – 37 file(s) modified
some "Summary" methods; some "Compare" group methods; logical dense matrices

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
+ /trunk/Matrix/man/ldenseMatrix-class.Rd
+ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
+ /trunk/Matrix/man/lsyMatrix-class.Rd
+ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/unused-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
+ /trunk/Matrix/R/ldenseMatrix.R
+ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1844 – move setGeneric to AllGeneric

maechler — Tue, 20 Sep 2005 10:15:26 +0000

maechler – 2 file(s) modified
move setGeneric to AllGeneric

~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/dgeMatrix.R

Rev 1833 – too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for ...

maechler — Mon, 19 Sep 2005 19:01:31 +0000

maechler – 44 file(s) modified
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/inst/test-tools.R
+ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
+ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsparseMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/tests/bind.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/dgTMatrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matprod.R

Rev 1704 – fixing to unused Lower/Upper Triangular test functions

maechler — Mon, 08 Aug 2005 08:35:17 +0000

maechler – 1 file(s) modified
fixing to unused Lower/Upper Triangular test functions

~ /trunk/Matrix/R/dgeMatrix.R

Rev 1686 – + tcrossprod() method for simple "matrix" and "numeric"

maechler — Sat, 30 Jul 2005 21:35:38 +0000

maechler – 2 file(s) modified
+ tcrossprod() method for simple "matrix" and "numeric"

~ /trunk/Matrix/man/tcrossprod.Rd
~ /trunk/Matrix/R/dgeMatrix.R

Rev 1463 – Added colSums and friends for dgeMatrix class

bates — Fri, 06 May 2005 23:52:34 +0000

bates – 7 file(s) modified
Added colSums and friends for dgeMatrix class

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/init.c
+ /trunk/Matrix/tests/rowcolOps.R

Rev 1387 – numeric x dgeMatrix : for solve etc; semi-activate the as.Matrix() ...

maechler — Mon, 18 Apr 2005 20:20:04 +0000

maechler – 2 file(s) modified
numeric x dgeMatrix : for solve etc; semi-activate the as.Matrix() idea

~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1382 – In R-2.1.0 matrix dispatches before integer so always set storage.mode ...

bates — Mon, 18 Apr 2005 17:02:26 +0000

bates – 1 file(s) modified
In R-2.1.0 matrix dispatches before integer so always set storage.mode on objects of class "matrix"

~ /trunk/Matrix/R/dgeMatrix.R

Rev 1324 – Create "fallback" methods for any kind of numeric, dense matrix

bates — Thu, 31 Mar 2005 21:19:35 +0000

bates – 9 file(s) modified
Create "fallback" methods for any kind of numeric, dense matrix

~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/expm.Rd
~ /trunk/Matrix/man/Schur.Rd
+ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/eigen.R
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/init.c

Rev 1321 – Moving methods for operations with numeric to the Matrix class ...

bates — Thu, 31 Mar 2005 17:10:16 +0000

bates – 20 file(s) modified
Moving methods for operations with numeric to the Matrix class and with integer to the dMatrix class

~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 1282 – Updates to multiplication and other methods

bates — Wed, 16 Mar 2005 01:08:36 +0000

bates – 20 file(s) modified
Updates to multiplication and other methods

~ /trunk/Matrix/man/Cholesky-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/dppMatrix.c
~ /trunk/Matrix/src/dppMatrix.h
~ /trunk/Matrix/src/dspMatrix.c
~ /trunk/Matrix/src/dspMatrix.h
~ /trunk/Matrix/src/factorizations.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/dpoMatrix.R
~ /trunk/Matrix/tests/validObj.R

Rev 1262 – mv some to new Auxiliaries file (early in alphabetic sorting!)

maechler — Sun, 13 Mar 2005 21:00:53 +0000

maechler – 3 file(s) modified
mv some to new Auxiliaries file (early in alphabetic sorting!)

+ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R

Rev 1258 – more %*% methods; some dimnames in C (untested); checks ...

maechler — Thu, 10 Mar 2005 17:57:47 +0000

maechler – 14 file(s) modified
more %*% methods; some dimnames in C (untested); checks extended

~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/src/dsyMatrix.c
~ /trunk/Matrix/src/dtpMatrix.c
~ /trunk/Matrix/src/dtpMatrix.h
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/dtpMatrix.R
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/validObj.R

Rev 1238 – + 2 crossprod methods

maechler — Sat, 05 Mar 2005 21:17:40 +0000

maechler – 1 file(s) modified
+ 2 crossprod methods

~ /trunk/Matrix/R/dgeMatrix.R

Rev 1229 – - move dim, dimnames, dimnames<- methods to "Matrix" ...

maechler — Fri, 04 Mar 2005 17:33:29 +0000

maechler – 1 file(s) modified
- move dim, dimnames, dimnames<- methods to "Matrix"
- add more %*% methods

~ /trunk/Matrix/R/dgeMatrix.R

Rev 1175 – dimnames(), "dimnames() <-", better t(), etc

maechler — Sun, 27 Feb 2005 00:04:16 +0000

maechler – 9 file(s) modified
dimnames(), "dimnames() <-", better t(), etc

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/validObj.R

Rev 1169 – more group methods and testing them

maechler — Sat, 26 Feb 2005 18:06:08 +0000

maechler – 5 file(s) modified
more group methods and testing them

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/dgeMatrix.R
+ /trunk/Matrix/tests/group-methods.R

Rev 1070 – "Arith" group methods work!

maechler — Thu, 10 Feb 2005 17:30:10 +0000

maechler – 4 file(s) modified
"Arith" group methods work!

~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/TODO

Rev 1066 – oops!

maechler — Thu, 10 Feb 2005 14:36:45 +0000

maechler – 1 file(s) modified
oops!

~ /trunk/Matrix/R/dgeMatrix.R

Rev 1065 – more "Done"

maechler — Thu, 10 Feb 2005 14:32:59 +0000

maechler – 4 file(s) modified
more "Done"

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/bCrosstab.Rd
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/TODO

Rev 1060 – add @Dimnames (-> new "mm")

maechler — Thu, 10 Feb 2005 13:50:27 +0000

maechler – 18 file(s) modified
add @Dimnames (-> new "mm")

~ /trunk/Matrix/data/mm.rda
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/Cholesky-class.Rd
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/dgBCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/matr-exp.R
~ /trunk/Matrix/tests/mm-redo.R
~ /trunk/Matrix/tests/validObj.R
~ /trunk/Matrix/TODO

Rev 1009 – dimnames?

maechler — Fri, 04 Feb 2005 23:36:17 +0000

maechler – 2 file(s) modified
dimnames?

~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/TODO

Rev 982 – renaming and rearranging classes

bates — Wed, 02 Feb 2005 16:11:21 +0000

bates – 9 file(s) modified
renaming and rearranging classes

~ /trunk/Matrix/R/bCrosstab.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Hilbert.R
~ /trunk/Matrix/R/ssclme.R

Rev 976 – Renaming and reorganizing classes

bates — Wed, 02 Feb 2005 14:14:59 +0000

bates – 22 file(s) modified
Renaming and reorganizing classes

~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/bCrosstab.R
~ /trunk/Matrix/R/cscBlocked.R
x /trunk/Matrix/R/cscMatrix.R
+ /trunk/Matrix/R/dgCMatrix.R (copied from /trunk/Matrix/R/cscMatrix.R@964)
+ /trunk/Matrix/R/dgeMatrix.R (copied from /trunk/Matrix/R/geMatrix.R@964)
+ /trunk/Matrix/R/dgTMatrix.R (copied from /trunk/Matrix/R/tripletMatrix.R@964)
+ /trunk/Matrix/R/dpoMatrix.R (copied from /trunk/Matrix/R/poMatrix.R@964)
+ /trunk/Matrix/R/dsCMatrix.R (copied from /trunk/Matrix/R/sscMatrix.R@964)
+ /trunk/Matrix/R/dsyMatrix.R (copied from /trunk/Matrix/R/syMatrix.R@964)
+ /trunk/Matrix/R/dtCMatrix.R (copied from /trunk/Matrix/R/tscMatrix.R@964)
+ /trunk/Matrix/R/dtrMatrix.R (copied from /trunk/Matrix/R/trMatrix.R@964)
~ /trunk/Matrix/R/eigen.R
x /trunk/Matrix/R/geMatrix.R
~ /trunk/Matrix/R/Matrix.R
x /trunk/Matrix/R/poMatrix.R
~ /trunk/Matrix/R/sscCrosstab.R
x /trunk/Matrix/R/sscMatrix.R
x /trunk/Matrix/R/syMatrix.R
x /trunk/Matrix/R/tripletMatrix.R
x /trunk/Matrix/R/trMatrix.R
x /trunk/Matrix/R/tscMatrix.R

Rev 960 – as.Matrix() shorter; cosmetic

maechler — Mon, 31 Jan 2005 21:17:57 +0000

maechler – 1 file(s) modified
as.Matrix() shorter; cosmetic

~ /trunk/Matrix/R/geMatrix.R

Rev 948 – Add expm function

bates — Sat, 29 Jan 2005 14:09:38 +0000

bates – 6 file(s) modified
Add expm function

+ /trunk/Matrix/man/expm.Rd
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/geMatrix.R
~ /trunk/Matrix/src/geMatrix.c
~ /trunk/Matrix/src/geMatrix.h
~ /trunk/Matrix/src/init.c

Rev 667 – Remove PACKAGE="Matrix" in .Call

bates — Wed, 27 Oct 2004 21:32:37 +0000

bates – 15 file(s) modified
Remove PACKAGE="Matrix" in .Call

~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/cscMatrix.R
~ /trunk/Matrix/R/eigen.R
~ /trunk/Matrix/R/geMatrix.R
~ /trunk/Matrix/R/lmeRep.R
~ /trunk/Matrix/R/LU.R
~ /trunk/Matrix/R/pdmatrix.R
~ /trunk/Matrix/R/poMatrix.R
~ /trunk/Matrix/R/sscCrosstab.R
~ /trunk/Matrix/R/ssclme.R
~ /trunk/Matrix/R/sscMatrix.R
~ /trunk/Matrix/R/syMatrix.R
~ /trunk/Matrix/R/tripletMatrix.R
~ /trunk/Matrix/R/trMatrix.R
~ /trunk/Matrix/R/tscMatrix.R

Rev 155 – Initial import

bates — Mon, 22 Mar 2004 20:20:05 +0000

bates – 264 file(s) modified
Initial import

+ /trunk/Matrix
+ /trunk/Matrix/ChangeLog
+ /trunk/Matrix/data
+ /trunk/Matrix/data/mm.rda
+ /trunk/Matrix/data/ScotsSec.rda
+ /trunk/Matrix/data/y.rda
+ /trunk/Matrix/DESCRIPTION
+ /trunk/Matrix/INDEX
+ /trunk/Matrix/inst
+ /trunk/Matrix/inst/doc
+ /trunk/Matrix/inst/doc/Comparisons.Rnw
+ /trunk/Matrix/inst/doc/Introduction.Rnw
+ /trunk/Matrix/inst/doc/Matrix.bib
+ /trunk/Matrix/inst/doc/MixedEffects.Rnw
+ /trunk/Matrix/inst/doc/myVignette.sty
+ /trunk/Matrix/install.R
+ /trunk/Matrix/man
+ /trunk/Matrix/man/Cholesky-class.Rd
+ /trunk/Matrix/man/coefGets.Rd
+ /trunk/Matrix/man/corFactor.Rd
+ /trunk/Matrix/man/corMatrix.Rd
+ /trunk/Matrix/man/corrmatrix-class.Rd
+ /trunk/Matrix/man/cscMatrix-class.Rd
+ /trunk/Matrix/man/expand.Rd
+ /trunk/Matrix/man/facmul.Rd
+ /trunk/Matrix/man/geMatrix-class.Rd
+ /trunk/Matrix/man/Hilbert.Rd
+ /trunk/Matrix/man/isInitialized.Rd
+ /trunk/Matrix/man/LU-class.Rd
+ /trunk/Matrix/man/lu.Rd
+ /trunk/Matrix/man/Matrix-class.Rd
+ /trunk/Matrix/man/Matrix.Rd
+ /trunk/Matrix/man/matrixGets.Rd
+ /trunk/Matrix/man/mm.Rd
+ /trunk/Matrix/man/norm.Rd
+ /trunk/Matrix/man/pdBlocked-class.Rd
+ /trunk/Matrix/man/pdCompSymm-class.Rd
+ /trunk/Matrix/man/pdDiag-class.Rd
+ /trunk/Matrix/man/pdfactor-class.Rd
+ /trunk/Matrix/man/pdFactor.Rd
+ /trunk/Matrix/man/pdIdent-class.Rd
+ /trunk/Matrix/man/pdLogChol-class.Rd
+ /trunk/Matrix/man/pdMat-class.Rd
+ /trunk/Matrix/man/pdmatrix-class.Rd
+ /trunk/Matrix/man/pdMatrix.Rd
+ /trunk/Matrix/man/pdNatural-class.Rd
+ /trunk/Matrix/man/poMatrix-class.Rd
+ /trunk/Matrix/man/rcond.Rd
+ /trunk/Matrix/man/Schur.Rd
+ /trunk/Matrix/man/ScotsSec.Rd
+ /trunk/Matrix/man/sscChol-class.Rd
+ /trunk/Matrix/man/sscCrosstab-class.Rd
+ /trunk/Matrix/man/sscCrosstab.Rd
+ /trunk/Matrix/man/ssclme-class.Rd
+ /trunk/Matrix/man/sscMatrix-class.Rd
+ /trunk/Matrix/man/syMatrix-class.Rd
+ /trunk/Matrix/man/tripletMatrix-class.Rd
+ /trunk/Matrix/man/trMatrix-class.Rd
+ /trunk/Matrix/man/tscMatrix-class.Rd
+ /trunk/Matrix/man/unpack.Rd
+ /trunk/Matrix/man/y.Rd
+ /trunk/Matrix/NAMESPACE
+ /trunk/Matrix/R
+ /trunk/Matrix/R/AAA.R
+ /trunk/Matrix/R/AllClass.R
+ /trunk/Matrix/R/AllGeneric.R
+ /trunk/Matrix/R/cscMatrix.R
+ /trunk/Matrix/R/eigen.R
+ /trunk/Matrix/R/geMatrix.R
+ /trunk/Matrix/R/Hilbert.R
+ /trunk/Matrix/R/LU.R
+ /trunk/Matrix/R/Matrix.R
+ /trunk/Matrix/R/pdCompSymm.R
+ /trunk/Matrix/R/pdDiag.R
+ /trunk/Matrix/R/pdIdent.R
+ /trunk/Matrix/R/pdLogChol.R
+ /trunk/Matrix/R/pdMat.R
+ /trunk/Matrix/R/pdNatural.R
+ /trunk/Matrix/R/poMatrix.R
+ /trunk/Matrix/R/sscCrosstab.R
+ /trunk/Matrix/R/sscMatrix.R
+ /trunk/Matrix/R/syMatrix.R
+ /trunk/Matrix/R/tripletMatrix.R
+ /trunk/Matrix/R/trMatrix.R
+ /trunk/Matrix/R/tscMatrix.R
+ /trunk/Matrix/src
+ /trunk/Matrix/src/cscMatrix.c
+ /trunk/Matrix/src/cscMatrix.h
+ /trunk/Matrix/src/dense.c
+ /trunk/Matrix/src/dense.h
+ /trunk/Matrix/src/factorizations.c
+ /trunk/Matrix/src/factorizations.h
+ /trunk/Matrix/src/flame.c
+ /trunk/Matrix/src/flame.h
+ /trunk/Matrix/src/geMatrix.c
+ /trunk/Matrix/src/geMatrix.h
+ /trunk/Matrix/src/geMutils.c
+ /trunk/Matrix/src/geMutils.h
+ /trunk/Matrix/src/ldl.c
+ /trunk/Matrix/src/ldl.h
+ /trunk/Matrix/src/LU.c
+ /trunk/Matrix/src/LU.h
+ /trunk/Matrix/src/Makefile
+ /trunk/Matrix/src/Makefile.win
+ /trunk/Matrix/src/Metis
+ /trunk/Matrix/src/Metis/balance.c
+ /trunk/Matrix/src/Metis/bucketsort.c
+ /trunk/Matrix/src/Metis/ccgraph.c
+ /trunk/Matrix/src/Metis/coarsen.c
+ /trunk/Matrix/src/Metis/compress.c
+ /trunk/Matrix/src/Metis/debug.c
+ /trunk/Matrix/src/Metis/defs.h
+ /trunk/Matrix/src/Metis/estmem.c
+ /trunk/Matrix/src/Metis/fm.c
+ /trunk/Matrix/src/Metis/fortran.c
+ /trunk/Matrix/src/Metis/frename.c
+ /trunk/Matrix/src/Metis/graph.c
+ /trunk/Matrix/src/Metis/initpart.c
+ /trunk/Matrix/src/Metis/kmetis.c
+ /trunk/Matrix/src/Metis/kvmetis.c
+ /trunk/Matrix/src/Metis/kwayfm.c
+ /trunk/Matrix/src/Metis/kwayrefine.c
+ /trunk/Matrix/src/Metis/kwayvolfm.c
+ /trunk/Matrix/src/Metis/kwayvolrefine.c
+ /trunk/Matrix/src/Metis/macros.h
+ /trunk/Matrix/src/Metis/Makefile
+ /trunk/Matrix/src/Metis/Makefile.win
+ /trunk/Matrix/src/Metis/match.c
+ /trunk/Matrix/src/Metis/mbalance.c
+ /trunk/Matrix/src/Metis/mbalance2.c
+ /trunk/Matrix/src/Metis/mcoarsen.c
+ /trunk/Matrix/src/Metis/memory.c
+ /trunk/Matrix/src/Metis/mesh.c
+ /trunk/Matrix/src/Metis/meshpart.c
+ /trunk/Matrix/src/Metis/metis.h
+ /trunk/Matrix/src/Metis/mfm.c
+ /trunk/Matrix/src/Metis/mfm2.c
+ /trunk/Matrix/src/Metis/mincover.c
+ /trunk/Matrix/src/Metis/minitpart.c
+ /trunk/Matrix/src/Metis/minitpart2.c
+ /trunk/Matrix/src/Metis/mkmetis.c
+ /trunk/Matrix/src/Metis/mkwayfmh.c
+ /trunk/Matrix/src/Metis/mkwayrefine.c
+ /trunk/Matrix/src/Metis/mmatch.c
+ /trunk/Matrix/src/Metis/mmd.c
+ /trunk/Matrix/src/Metis/mpmetis.c
+ /trunk/Matrix/src/Metis/mrefine.c
+ /trunk/Matrix/src/Metis/mrefine2.c
+ /trunk/Matrix/src/Metis/mutil.c
+ /trunk/Matrix/src/Metis/myqsort.c
+ /trunk/Matrix/src/Metis/ometis.c
+ /trunk/Matrix/src/Metis/parmetis.c
+ /trunk/Matrix/src/Metis/pmetis.c
+ /trunk/Matrix/src/Metis/pqueue.c
+ /trunk/Matrix/src/Metis/proto.h
+ /trunk/Matrix/src/Metis/refine.c
+ /trunk/Matrix/src/Metis/rename.h
+ /trunk/Matrix/src/Metis/separator.c
+ /trunk/Matrix/src/Metis/sfm.c
+ /trunk/Matrix/src/Metis/srefine.c
+ /trunk/Matrix/src/Metis/stat.c
+ /trunk/Matrix/src/Metis/struct.h
+ /trunk/Matrix/src/Metis/subdomains.c
+ /trunk/Matrix/src/Metis/timing.c
+ /trunk/Matrix/src/Metis/util.c
+ /trunk/Matrix/src/Metis_utils.c
+ /trunk/Matrix/src/Metis_utils.h
+ /trunk/Matrix/src/Mutils.c
+ /trunk/Matrix/src/Mutils.h
+ /trunk/Matrix/src/pdDiag.c
+ /trunk/Matrix/src/pdIdent.c
+ /trunk/Matrix/src/pdLogChol.c
+ /trunk/Matrix/src/pdMat.c
+ /trunk/Matrix/src/pdNatural.c
+ /trunk/Matrix/src/poMatrix.c
+ /trunk/Matrix/src/poMatrix.h
+ /trunk/Matrix/src/sscChol.c
+ /trunk/Matrix/src/sscChol.h
+ /trunk/Matrix/src/sscCrosstab.c
+ /trunk/Matrix/src/sscCrosstab.h
+ /trunk/Matrix/src/ssclme.c
+ /trunk/Matrix/src/ssclme.h
+ /trunk/Matrix/src/sscMatrix.c
+ /trunk/Matrix/src/sscMatrix.h
+ /trunk/Matrix/src/syMatrix.c
+ /trunk/Matrix/src/syMatrix.h
+ /trunk/Matrix/src/taucs
+ /trunk/Matrix/src/taucs/Makefile
+ /trunk/Matrix/src/taucs/Makefile.win
+ /trunk/Matrix/src/taucs/taucs.h
+ /trunk/Matrix/src/taucs/taucs_ccs_base.c
+ /trunk/Matrix/src/taucs/taucs_ccs_factor_llt.c
+ /trunk/Matrix/src/taucs/taucs_ccs_ops.c
+ /trunk/Matrix/src/taucs/taucs_ccs_solve_llt.c
+ /trunk/Matrix/src/taucs/taucs_ccs_xxt.c
+ /trunk/Matrix/src/taucs/taucs_complex.c
+ /trunk/Matrix/src/taucs/taucs_config_build.h
+ /trunk/Matrix/src/taucs/taucs_config_tests.h
+ /trunk/Matrix/src/taucs/taucs_malloc.c
+ /trunk/Matrix/src/taucs/taucs_private.h
+ /trunk/Matrix/src/taucs/taucs_sn_llt.c
+ /trunk/Matrix/src/taucs/taucs_vec_base.c
+ /trunk/Matrix/src/taucs_utils.c
+ /trunk/Matrix/src/taucs_utils.h
+ /trunk/Matrix/src/triplet.c
+ /trunk/Matrix/src/triplet.h
+ /trunk/Matrix/src/trMatrix.c
+ /trunk/Matrix/src/trMatrix.h
+ /trunk/Matrix/src/tscMatrix.c
+ /trunk/Matrix/src/tscMatrix.h
+ /trunk/Matrix/src/umfpack
+ /trunk/Matrix/src/umfpack/amd.h
+ /trunk/Matrix/src/umfpack/amd_internal.h
+ /trunk/Matrix/src/umfpack/Makefile
+ /trunk/Matrix/src/umfpack/Makefile.win
+ /trunk/Matrix/src/umfpack/umfpack.h
+ /trunk/Matrix/src/umfpack/UMFPACK.README
+ /trunk/Matrix/src/umfpack/umfpack_col_to_triplet.h
+ /trunk/Matrix/src/umfpack/umfpack_defaults.h
+ /trunk/Matrix/src/umfpack/umfpack_free_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_free_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_get_lunz.h
+ /trunk/Matrix/src/umfpack/umfpack_get_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_get_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_load_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_load_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_report_control.h
+ /trunk/Matrix/src/umfpack/umfpack_report_info.h
+ /trunk/Matrix/src/umfpack/umfpack_report_matrix.h
+ /trunk/Matrix/src/umfpack/umfpack_report_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_report_perm.h
+ /trunk/Matrix/src/umfpack/umfpack_report_status.h
+ /trunk/Matrix/src/umfpack/umfpack_report_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_report_triplet.h
+ /trunk/Matrix/src/umfpack/umfpack_report_vector.h
+ /trunk/Matrix/src/umfpack/umfpack_save_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_save_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_scale.h
+ /trunk/Matrix/src/umfpack/umfpack_solve.h
+ /trunk/Matrix/src/umfpack/umfpack_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_tictoc.h
+ /trunk/Matrix/src/umfpack/umfpack_timer.h
+ /trunk/Matrix/src/umfpack/umfpack_transpose.h
+ /trunk/Matrix/src/umfpack/umfpack_triplet_to_col.c
+ /trunk/Matrix/src/umfpack/umfpack_triplet_to_col.h
+ /trunk/Matrix/src/umfpack/umf_config.h
+ /trunk/Matrix/src/umfpack/umf_dump.h
+ /trunk/Matrix/src/umfpack/umf_free.c
+ /trunk/Matrix/src/umfpack/umf_free.h
+ /trunk/Matrix/src/umfpack/umf_internal.h
+ /trunk/Matrix/src/umfpack/umf_malloc.c
+ /trunk/Matrix/src/umfpack/umf_malloc.h
+ /trunk/Matrix/src/umfpack/umf_triplet.c
+ /trunk/Matrix/src/umfpack/umf_triplet.h
+ /trunk/Matrix/src/umfpack/umf_version.h
+ /trunk/Matrix/src/utils.c
+ /trunk/Matrix/tests
+ /trunk/Matrix/tests/cscMatrix.R
+ /trunk/Matrix/tests/pdCompSymm.R
+ /trunk/Matrix/tests/pdDiag.R
+ /trunk/Matrix/tests/pdIdent.R
+ /trunk/Matrix/tests/pdLogChol.R
+ /trunk/Matrix/tests/pdNatural.R
+ /trunk/Matrix/tests/poMatrix.R