R-packages – /branches/Matrix-mer2/R/Matrix.R

Rev 2127 – Merging (not entirely successfully)

bates — Wed, 04 Jan 2006 21:31:47 +0000

bates – 34 file(s) modified
Merging (not entirely successfully)

~ /branches/Matrix-mer2/R/AllClass.R
~ /branches/Matrix-mer2/R/AllGeneric.R
~ /branches/Matrix-mer2/R/Auxiliaries.R
~ /branches/Matrix-mer2/R/Csparse.R
~ /branches/Matrix-mer2/R/denseMatrix.R
~ /branches/Matrix-mer2/R/dgCMatrix.R
~ /branches/Matrix-mer2/R/dgeMatrix.R
~ /branches/Matrix-mer2/R/dgRMatrix.R
+ /branches/Matrix-mer2/R/diagMatrix.R (copied from /trunk/Matrix/R/diagMatrix.R@2124)
~ /branches/Matrix-mer2/R/dpoMatrix.R
~ /branches/Matrix-mer2/R/dppMatrix.R
~ /branches/Matrix-mer2/R/dsCMatrix.R
~ /branches/Matrix-mer2/R/dspMatrix.R
~ /branches/Matrix-mer2/R/dsTMatrix.R
~ /branches/Matrix-mer2/R/dsyMatrix.R
~ /branches/Matrix-mer2/R/dtCMatrix.R
~ /branches/Matrix-mer2/R/dtpMatrix.R
~ /branches/Matrix-mer2/R/dtrMatrix.R
~ /branches/Matrix-mer2/R/dtTMatrix.R
~ /branches/Matrix-mer2/R/eigen.R
~ /branches/Matrix-mer2/R/lCholCMatrix.R
~ /branches/Matrix-mer2/R/ldenseMatrix.R
~ /branches/Matrix-mer2/R/lgTMatrix.R
~ /branches/Matrix-mer2/R/lmer.R
~ /branches/Matrix-mer2/R/lsCMatrix.R
~ /branches/Matrix-mer2/R/ltCMatrix.R
+ /branches/Matrix-mer2/R/ltTMatrix.R (copied from /trunk/Matrix/R/ltTMatrix.R@2124)
~ /branches/Matrix-mer2/R/LU.R
~ /branches/Matrix-mer2/R/Matrix.R
~ /branches/Matrix-mer2/R/sparseMatrix.R
~ /branches/Matrix-mer2/R/Tsparse.R
~ /branches/Matrix-mer2/src/dgeMatrix.c
~ /branches/Matrix-mer2/src/dgeMatrix.h
~ /branches/Matrix-mer2/src/init.c

Rev 1929 – Incorporating CHOLMOD-based lmer

bates — Fri, 21 Oct 2005 19:33:37 +0000

bates – 1 file(s) modified
Incorporating CHOLMOD-based lmer

+ /branches/Matrix-mer2 (copied from /trunk/Matrix@1928)

Rev 1906 – isSymmetric() & simulate() updates; sparse subsetting

maechler — Fri, 07 Oct 2005 20:15:08 +0000

maechler – 9 file(s) modified
isSymmetric() & simulate() updates; sparse subsetting

~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/zzz.R

Rev 1888 – (comments)

maechler — Wed, 05 Oct 2005 16:57:55 +0000

maechler – 3 file(s) modified
(comments)

~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1869 – more coercions; particularly "d" <-> "l"; more tests (and more ...

maechler — Fri, 30 Sep 2005 17:28:00 +0000

maechler – 45 file(s) modified
more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ...

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/denseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/ldenseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/zzz.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Makefile
~ /trunk/Matrix/tests/base-matrix-fun.R
~ /trunk/Matrix/tests/dg_Matrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 1866 – more "Compare" and some "!" methods; expm() for sparse; updated ...

maechler — Wed, 28 Sep 2005 19:34:31 +0000

maechler – 15 file(s) modified
more "Compare" and some "!" methods; expm() for sparse; updated tests

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/expm.Rd
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lsparseMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/pMatrix.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matr-exp.R

Rev 1860 – cleanup

maechler — Wed, 28 Sep 2005 09:17:08 +0000

maechler – 3 file(s) modified
cleanup

~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/simple.R

Rev 1857 – some "Summary" methods; some "Compare" group methods; logical dense matrices

maechler — Wed, 28 Sep 2005 08:56:42 +0000

maechler – 37 file(s) modified
some "Summary" methods; some "Compare" group methods; logical dense matrices

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
+ /trunk/Matrix/man/ldenseMatrix-class.Rd
+ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
+ /trunk/Matrix/man/lsyMatrix-class.Rd
+ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/unused-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
+ /trunk/Matrix/R/ldenseMatrix.R
+ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1833 – too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for ...

maechler — Mon, 19 Sep 2005 19:01:31 +0000

maechler – 44 file(s) modified
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/inst/test-tools.R
+ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
+ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsparseMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/tests/bind.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/dgTMatrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matprod.R

Rev 1804 – cbind() / cbind2() methods for R >= 2.2.0

maechler — Thu, 08 Sep 2005 15:30:08 +0000

maechler – 13 file(s) modified
cbind() / cbind2() methods for R >= 2.2.0

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/inst/test-tools.R
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/zzz.R

Rev 1777 – new classes "index", "symmetricM" and "triangularM"; indexing for logical and ...

maechler — Wed, 31 Aug 2005 17:49:47 +0000

maechler – 15 file(s) modified
new classes "index", "symmetricM*" and "triangularM*"; indexing for logical and character indices; new tests; more to do

~ /trunk/Matrix/ChangeLog
+ /trunk/Matrix/man/index-class.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/gTMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
+ /trunk/Matrix/tests/dgTMatrix.R
+ /trunk/Matrix/tests/graph.R
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save

Rev 1766 – indexing (mainly denseMatrix) - using "vector" indices

maechler — Sat, 27 Aug 2005 21:29:21 +0000

maechler – 4 file(s) modified
indexing (mainly denseMatrix) - using "vector" indices

~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/gTMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1761 – Version 0.98-6: "[" methods for dense matrices; first "[<-"; examples

maechler — Fri, 26 Aug 2005 17:26:49 +0000

maechler – 12 file(s) modified
Version 0.98-6: "[" methods for dense matrices; first "[<-"; examples

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/denseMatrix-class.Rd
~ /trunk/Matrix/man/dsRMatrix-class.Rd
~ /trunk/Matrix/man/gTMatrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
+ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
+ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R

Rev 1746 – printing of sparse logicals; "[" reorganization (part 1)

maechler — Fri, 19 Aug 2005 17:01:11 +0000

maechler – 16 file(s) modified
printing of sparse logicals; "[" reorganization (part 1)

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/TODO

Rev 1719 – +"denseMatrix" class; export defined but unused classes

maechler — Thu, 11 Aug 2005 07:41:59 +0000

maechler – 7 file(s) modified
+"denseMatrix" class; export defined but unused classes

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
+ /trunk/Matrix/man/denseMatrix-class.Rd
+ /trunk/Matrix/man/unused-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Matrix.R

Rev 1387 – numeric x dgeMatrix : for solve etc; semi-activate the as.Matrix() ...

maechler — Mon, 18 Apr 2005 20:20:04 +0000

maechler – 2 file(s) modified
numeric x dgeMatrix : for solve etc; semi-activate the as.Matrix() idea

~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1321 – Moving methods for operations with numeric to the Matrix class ...

bates — Thu, 31 Mar 2005 17:10:16 +0000

bates – 20 file(s) modified
Moving methods for operations with numeric to the Matrix class and with integer to the dMatrix class

~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 1314 – + virtual "sparseMatrix" classes

maechler — Sat, 26 Mar 2005 15:59:18 +0000

maechler – 6 file(s) modified
+ virtual "sparseMatrix" classes

~ /trunk/Matrix/ChangeLog
+ /trunk/Matrix/man/dsparseMatrix-class.Rd
+ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Matrix.R

Rev 1288 – + as.matrix() + unname() method

maechler — Thu, 17 Mar 2005 17:52:06 +0000

maechler – 4 file(s) modified
+ as.matrix() + unname() method

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/Matrix.R

Rev 1287 – more %*% and setAs(); tests too

maechler — Wed, 16 Mar 2005 16:57:52 +0000

maechler – 16 file(s) modified
more %*% and setAs(); tests too

~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/pMatrix.R
~ /trunk/Matrix/tests/dpoMatrix.R
~ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/dtpMatrix.R
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/validObj.R

Rev 1240 – extended show Method, testing for "Matrix"; rather "ddenseMatrix" -> "matrix"

maechler — Sat, 05 Mar 2005 21:20:42 +0000

maechler – 1 file(s) modified
extended show Method, testing for "Matrix"; rather "ddenseMatrix" -> "matrix"

~ /trunk/Matrix/R/Matrix.R

Rev 1228 – - move dim, dimnames, dimnames<- methods from "dgeMatrix" to ...

maechler — Fri, 04 Mar 2005 17:33:03 +0000

maechler – 1 file(s) modified
- move dim, dimnames, dimnames<- methods from "dgeMatrix" to here
- setAs(* , to = "matrix")

~ /trunk/Matrix/R/Matrix.R

Rev 1175 – dimnames(), "dimnames() <-", better t(), etc

maechler — Sun, 27 Feb 2005 00:04:16 +0000

maechler – 9 file(s) modified
dimnames(), "dimnames() <-", better t(), etc

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/validObj.R

Rev 1060 – add @Dimnames (-> new "mm")

maechler — Thu, 10 Feb 2005 13:50:27 +0000

maechler – 18 file(s) modified
add @Dimnames (-> new "mm")

~ /trunk/Matrix/data/mm.rda
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/Cholesky-class.Rd
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/dgBCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/matr-exp.R
~ /trunk/Matrix/tests/mm-redo.R
~ /trunk/Matrix/tests/validObj.R
~ /trunk/Matrix/TODO

Rev 1011 – better show(); using new option "max.print"

maechler — Fri, 04 Feb 2005 23:45:12 +0000

maechler – 2 file(s) modified
better show(); using new option "max.print"

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/R/Matrix.R

Rev 998 – - wrap line - if(.) style in as.Matrix()

maechler — Fri, 04 Feb 2005 18:16:32 +0000

maechler – 1 file(s) modified
- wrap line
- if(.) style in as.Matrix()

~ /trunk/Matrix/R/Matrix.R

Rev 976 – Renaming and reorganizing classes

bates — Wed, 02 Feb 2005 14:14:59 +0000

bates – 22 file(s) modified
Renaming and reorganizing classes

~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/bCrosstab.R
~ /trunk/Matrix/R/cscBlocked.R
x /trunk/Matrix/R/cscMatrix.R
+ /trunk/Matrix/R/dgCMatrix.R (copied from /trunk/Matrix/R/cscMatrix.R@964)
+ /trunk/Matrix/R/dgeMatrix.R (copied from /trunk/Matrix/R/geMatrix.R@964)
+ /trunk/Matrix/R/dgTMatrix.R (copied from /trunk/Matrix/R/tripletMatrix.R@964)
+ /trunk/Matrix/R/dpoMatrix.R (copied from /trunk/Matrix/R/poMatrix.R@964)
+ /trunk/Matrix/R/dsCMatrix.R (copied from /trunk/Matrix/R/sscMatrix.R@964)
+ /trunk/Matrix/R/dsyMatrix.R (copied from /trunk/Matrix/R/syMatrix.R@964)
+ /trunk/Matrix/R/dtCMatrix.R (copied from /trunk/Matrix/R/tscMatrix.R@964)
+ /trunk/Matrix/R/dtrMatrix.R (copied from /trunk/Matrix/R/trMatrix.R@964)
~ /trunk/Matrix/R/eigen.R
x /trunk/Matrix/R/geMatrix.R
~ /trunk/Matrix/R/Matrix.R
x /trunk/Matrix/R/poMatrix.R
~ /trunk/Matrix/R/sscCrosstab.R
x /trunk/Matrix/R/sscMatrix.R
x /trunk/Matrix/R/syMatrix.R
x /trunk/Matrix/R/tripletMatrix.R
x /trunk/Matrix/R/trMatrix.R
x /trunk/Matrix/R/tscMatrix.R

Rev 155 – Initial import

bates — Mon, 22 Mar 2004 20:20:05 +0000

bates – 264 file(s) modified
Initial import

+ /trunk/Matrix
+ /trunk/Matrix/ChangeLog
+ /trunk/Matrix/data
+ /trunk/Matrix/data/mm.rda
+ /trunk/Matrix/data/ScotsSec.rda
+ /trunk/Matrix/data/y.rda
+ /trunk/Matrix/DESCRIPTION
+ /trunk/Matrix/INDEX
+ /trunk/Matrix/inst
+ /trunk/Matrix/inst/doc
+ /trunk/Matrix/inst/doc/Comparisons.Rnw
+ /trunk/Matrix/inst/doc/Introduction.Rnw
+ /trunk/Matrix/inst/doc/Matrix.bib
+ /trunk/Matrix/inst/doc/MixedEffects.Rnw
+ /trunk/Matrix/inst/doc/myVignette.sty
+ /trunk/Matrix/install.R
+ /trunk/Matrix/man
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+ /trunk/Matrix/man/unpack.Rd
+ /trunk/Matrix/man/y.Rd
+ /trunk/Matrix/NAMESPACE
+ /trunk/Matrix/R
+ /trunk/Matrix/R/AAA.R
+ /trunk/Matrix/R/AllClass.R
+ /trunk/Matrix/R/AllGeneric.R
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+ /trunk/Matrix/src/cscMatrix.h
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+ /trunk/Matrix/src/dense.h
+ /trunk/Matrix/src/factorizations.c
+ /trunk/Matrix/src/factorizations.h
+ /trunk/Matrix/src/flame.c
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+ /trunk/Matrix/src/LU.c
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+ /trunk/Matrix/src/Metis/pqueue.c
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+ /trunk/Matrix/src/Metis/refine.c
+ /trunk/Matrix/src/Metis/rename.h
+ /trunk/Matrix/src/Metis/separator.c
+ /trunk/Matrix/src/Metis/sfm.c
+ /trunk/Matrix/src/Metis/srefine.c
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+ /trunk/Matrix/src/Metis/subdomains.c
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+ /trunk/Matrix/src/Mutils.c
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+ /trunk/Matrix/src/pdDiag.c
+ /trunk/Matrix/src/pdIdent.c
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+ /trunk/Matrix/src/umfpack/Makefile
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+ /trunk/Matrix/src/umfpack/umfpack_col_to_triplet.h
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+ /trunk/Matrix/src/umfpack/umfpack_free_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_free_symbolic.h
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+ /trunk/Matrix/src/umfpack/umfpack_get_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_get_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_load_numeric.h
+ /trunk/Matrix/src/umfpack/umfpack_load_symbolic.h
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+ /trunk/Matrix/src/umfpack/umfpack_save_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_scale.h
+ /trunk/Matrix/src/umfpack/umfpack_solve.h
+ /trunk/Matrix/src/umfpack/umfpack_symbolic.h
+ /trunk/Matrix/src/umfpack/umfpack_tictoc.h
+ /trunk/Matrix/src/umfpack/umfpack_timer.h
+ /trunk/Matrix/src/umfpack/umfpack_transpose.h
+ /trunk/Matrix/src/umfpack/umfpack_triplet_to_col.c
+ /trunk/Matrix/src/umfpack/umfpack_triplet_to_col.h
+ /trunk/Matrix/src/umfpack/umf_config.h
+ /trunk/Matrix/src/umfpack/umf_dump.h
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+ /trunk/Matrix/src/umfpack/umf_free.h
+ /trunk/Matrix/src/umfpack/umf_internal.h
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+ /trunk/Matrix/src/umfpack/umf_malloc.h
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+ /trunk/Matrix/src/umfpack/umf_version.h
+ /trunk/Matrix/src/utils.c
+ /trunk/Matrix/tests
+ /trunk/Matrix/tests/cscMatrix.R
+ /trunk/Matrix/tests/pdCompSymm.R
+ /trunk/Matrix/tests/pdDiag.R
+ /trunk/Matrix/tests/pdIdent.R
+ /trunk/Matrix/tests/pdLogChol.R
+ /trunk/Matrix/tests/pdNatural.R
+ /trunk/Matrix/tests/poMatrix.R

R-packages – /branches/Matrix-mer2/R/Matrix.R

Rev 2127 – Merging (not entirely successfully)

Rev 1929 – Incorporating CHOLMOD-based lmer

Rev 1906 – isSymmetric() & simulate() updates; sparse subsetting

Rev 1888 – (comments)

Rev 1869 – more coercions; particularly "d" <-> "l"; more tests (and more ...

Rev 1866 – more "Compare" and some "!" methods; expm() for sparse; updated ...

Rev 1860 – cleanup

Rev 1857 – some "Summary" methods; some "Compare" group methods; logical dense matrices

Rev 1833 – too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for ...

Rev 1804 – cbind() / cbind2() methods for R >= 2.2.0

Rev 1777 – new classes "index", "symmetricM*" and "triangularM*"; indexing for logical and ...

Rev 1766 – indexing (mainly denseMatrix) - using "vector" indices

Rev 1761 – Version 0.98-6: "[" methods for dense matrices; first "[<-"; examples

Rev 1746 – printing of sparse logicals; "[" reorganization (part 1)

Rev 1719 – +"denseMatrix" class; export defined but unused classes

Rev 1387 – numeric x dgeMatrix : for solve etc; semi-activate the as.Matrix() ...

Rev 1321 – Moving methods for operations with numeric to the Matrix class ...

Rev 1314 – + virtual "sparseMatrix" classes

Rev 1288 – + as.matrix() + unname() method

Rev 1287 – more %*% and setAs(); tests too

Rev 1240 – extended show Method, testing for "Matrix"; rather "ddenseMatrix" -> "matrix"

Rev 1228 – - move dim, dimnames, dimnames<- methods from "dgeMatrix" to ...

Rev 1175 – dimnames(), "dimnames() <-", better t(), etc

Rev 1060 – add @Dimnames (-> new "mm")

Rev 1011 – better show(); using new option "max.print"

Rev 998 – - wrap line - if(.) style in as.Matrix()

Rev 976 – Renaming and reorganizing classes

Rev 155 – Initial import

Rev 1777 – new classes "index", "symmetricM" and "triangularM"; indexing for logical and ...