| Rev |
Age |
Author |
Path |
Log message |
Diff |
Changes |
| 2159 |
7502 d 15 h |
bates |
/branches/Matrix-mer2/ |
Change from dCHMfactor class to several classes dCHMsuper, lCHMsuper, dCHMsimpl and lCHMsimpl |
|
/branches/Matrix-mer2/INDEX
/branches/Matrix-mer2/NAMESPACE
/branches/Matrix-mer2/R/AllClass.R
/branches/Matrix-mer2/src/chm_common.c
/branches/Matrix-mer2/src/chm_common.h
|
| 2145 |
7506 d 12 h |
bates |
/branches/Matrix-mer2/ |
Conversion of the L slot in an mer object to a dCHMfactor object |
|
/branches/Matrix-mer2/NAMESPACE
/branches/Matrix-mer2/R/AllClass.R
/branches/Matrix-mer2/src/chm_common.c
/branches/Matrix-mer2/src/lmer.c
|
| 2139 |
7507 d 14 h |
bates |
/branches/Matrix-mer2/ |
Remove correlation class |
|
/branches/Matrix-mer2/NAMESPACE
|
| 2134 |
7507 d 21 h |
bates |
/branches/Matrix-mer2/ |
Working around namespace issues |
|
/branches/Matrix-mer2/NAMESPACE
/branches/Matrix-mer2/src/lmer.c
|
| 2076 |
7528 d 14 h |
bates |
/branches/Matrix-mer2/ |
More work on glmer_devLaplace and related functions |
|
/branches/Matrix-mer2/NAMESPACE
/branches/Matrix-mer2/R/lmer.R
/branches/Matrix-mer2/src/lmer.c
|
| 2010 |
7560 d 23 h |
bates |
/branches/Matrix-mer2/ |
Fold mer2 representation into lmer. Remove dgBCMatrix, pdmatrix, etc. |
|
/branches/Matrix-mer2/R/bCrosstab.R
/branches/Matrix-mer2/R/dgBCMatrix.R
/branches/Matrix-mer2/R/pdmatrix.R
/branches/Matrix-mer2/man/bCrosstab.Rd
/branches/Matrix-mer2/man/dgBCMatrix-class.Rd
/branches/Matrix-mer2/man/pdmatrix-class.Rd
/branches/Matrix-mer2/src/dgBCMatrix.c
/branches/Matrix-mer2/src/dgBCMatrix.h
/branches/Matrix-mer2/INDEX
/branches/Matrix-mer2/NAMESPACE
/branches/Matrix-mer2/R/AllClass.R
/branches/Matrix-mer2/R/dgCMatrix.R
/branches/Matrix-mer2/R/lmer.R
/branches/Matrix-mer2/inst/doc/Comparisons.Rnw
/branches/Matrix-mer2/inst/doc/Introduction.Rnw
/branches/Matrix-mer2/man/VarCorr.Rd
/branches/Matrix-mer2/man/dpoMatrix-class.Rd
/branches/Matrix-mer2/man/lmer-class.Rd
/branches/Matrix-mer2/man/mcmcsamp.Rd
/branches/Matrix-mer2/man/ranef.Rd
/branches/Matrix-mer2/src/DEPS.mkf
/branches/Matrix-mer2/src/SOURCES_C.mkf
/branches/Matrix-mer2/src/init.c
/branches/Matrix-mer2/src/lmer.c
/branches/Matrix-mer2/src/lmer.h
/branches/Matrix-mer2/tests/Class+Meth.R
|
| 1964 |
7566 d 23 h |
bates |
/branches/Matrix-mer2/ |
The beginning of a show method for mer2 objects |
|
/branches/Matrix-mer2/NAMESPACE
/branches/Matrix-mer2/R/AllClass.R
/branches/Matrix-mer2/R/dpoMatrix.R
/branches/Matrix-mer2/R/lmer.R
|
| 1929 |
7583 d 17 h |
bates |
/branches/Matrix-mer2/ |
Incorporating CHOLMOD-based lmer |
|
/branches/Matrix-mer2
|
| 1869 |
7604 d 19 h |
maechler |
/trunk/Matrix/ |
more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ... |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgeMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/R/zzz.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dCholCMatrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/denseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/dtpMatrix-class.Rd
/trunk/Matrix/man/dtrMatrix-class.Rd
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/ltrMatrix-class.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
/trunk/Matrix/src/Makefile
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/base-matrix-fun.R
/trunk/Matrix/tests/dg_Matrix.R
/trunk/Matrix/tests/group-methods.R
/trunk/Matrix/tests/simple.R
|
| 1857 |
7607 d 4 h |
maechler |
/trunk/Matrix/ |
some "Summary" methods; some "Compare" group methods; logical dense matrices |
|
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgeMatrix.R
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsyMatrix-class.Rd
/trunk/Matrix/man/ltrMatrix-class.Rd
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dpoMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/unused-classes.Rd
|
| 1851 |
7608 d 12 h |
bates |
/trunk/Matrix/ |
Temporary function mer2 to experiment with CHOLMOD-based mixed-effects |
|
/trunk/Matrix/src/AMD/Source/Makefile.bak
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
|
| 1845 |
7615 d 3 h |
maechler |
/trunk/Matrix/ |
export more non-Primitive group generics |
|
/trunk/Matrix/NAMESPACE
|
| 1833 |
7615 d 18 h |
maechler |
/trunk/Matrix/ |
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes |
|
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/lgTMatrix.R
/trunk/Matrix/R/lsparseMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/inst/test-tools.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/Subassign-methods.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/Xtrct-methods.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/dtrMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/tests/Class+Meth.R
/trunk/Matrix/tests/bind.R
/trunk/Matrix/tests/dgTMatrix.R
/trunk/Matrix/tests/group-methods.R
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
/trunk/Matrix/tests/matprod.R
|
| 1831 |
7616 d 13 h |
bates |
/trunk/Matrix/ |
More progress on incorporating CHOLMOD - still not passing CMD check |
|
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/gTMatrix.R
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/lsparseMatrix.R
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dgTMatrix.R
|
| 1804 |
7626 d 21 h |
maechler |
/trunk/Matrix/ |
cbind() / cbind2() methods for R >= 2.2.0 |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dpoMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/R/zzz.R
/trunk/Matrix/inst/test-tools.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
|
| 1779 |
7633 d 23 h |
bates |
/trunk/Matrix/ |
New simulate method for lmer objects |
|
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/man/simulate.Rd
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
|
| 1777 |
7634 d 19 h |
maechler |
/trunk/Matrix/ |
new classes "index", "symmetricM*" and "triangularM*"; indexing for logical and character indices; new tests; more to do |
|
/trunk/Matrix/man/index-class.Rd
/trunk/Matrix/tests/dgTMatrix.R
/trunk/Matrix/tests/graph.R
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/gTMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/Subassign-methods.Rd
/trunk/Matrix/man/Xtrct-methods.Rd
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
|
| 1769 |
7637 d 23 h |
bates |
/trunk/Matrix/ |
Add simulate method for lmer |
|
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/src/lmer.c
|
| 1723 |
7649 d 19 h |
maechler |
/trunk/Matrix/ |
export dgR*, dsR* & dtR* Matrix - and "fix" stubs |
|
/trunk/Matrix/man/dsRMatrix-class.Rd
/trunk/Matrix/man/dtRMatrix-class-def.Rd
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
|
| 1719 |
7655 d 5 h |
maechler |
/trunk/Matrix/ |
+"denseMatrix" class; export defined but unused classes |
|
/trunk/Matrix/man/denseMatrix-class.Rd
/trunk/Matrix/man/unused-classes.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/man/ddenseMatrix-class.Rd
|
The R Project SVN
R-packages