R-packages – /branches/Matrix-for-R-2.3.x/src/init.c

Rev 3543 – branching an "old-R" compatible version of Matrix

maechler — Sat, 02 Sep 2006 16:36:14 +0000

maechler – 1 file(s) modified
branching an "old-R" compatible version of Matrix

+ /branches/Matrix-for-R-2.3.x (copied from /trunk/Matrix@3542)

Rev 3522 – housekeeping

bates — Wed, 30 Aug 2006 03:05:59 +0000

bates – 1 file(s) modified
housekeeping

~ /trunk/Matrix/src/init.c

Rev 3514 – Remove vestigial classed argument for dsCMatrix_matrix_solve

bates — Tue, 29 Aug 2006 00:04:48 +0000

bates – 3 file(s) modified
Remove vestigial classed argument for dsCMatrix_matrix_solve

~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3508 – Added triu, tril and band for ddenseMatrix objects.

bates — Sun, 27 Aug 2006 16:16:35 +0000

bates – 8 file(s) modified
Added triu, tril and band for ddenseMatrix objects.

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/band.Rd
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/dense.h
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3505 – Added initial version of dgeMatrix_band but may change design

bates — Sat, 26 Aug 2006 17:25:57 +0000

bates – 3 file(s) modified
Added initial version of dgeMatrix_band but may change design

~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3502 – Move methods to the CsparseMatrix class

bates — Sat, 26 Aug 2006 03:29:36 +0000

bates – 21 file(s) modified
Move methods to the CsparseMatrix class

~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lgCMatrix.c
~ /trunk/Matrix/src/lgCMatrix.h
~ /trunk/Matrix/src/lgTMatrix.c
~ /trunk/Matrix/src/lgTMatrix.h
~ /trunk/Matrix/src/lsCMatrix.c
~ /trunk/Matrix/src/lsCMatrix.h
~ /trunk/Matrix/src/ltCMatrix.c

Rev 3501 – use setAs("ddenseMatrix", "dgeMatrix", *) instead of older specific ones

maechler — Fri, 25 Aug 2006 20:38:36 +0000

maechler – 18 file(s) modified
use setAs("ddenseMatrix", "dgeMatrix", *) instead of older specific ones

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/ddiMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/diagMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/src/dsyMatrix.c
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Mutils.c

Rev 3488 – Use dup_mMatrix_as_dgeMatrix

bates — Thu, 24 Aug 2006 18:22:39 +0000

bates – 12 file(s) modified
Use dup_mMatrix_as_dgeMatrix

~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/sparseQR.R
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsTMatrix.c
~ /trunk/Matrix/src/dsTMatrix.h
~ /trunk/Matrix/src/dtTMatrix.c
~ /trunk/Matrix/src/dtTMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lsCMatrix.c
~ /trunk/Matrix/src/lsCMatrix.h

Rev 3484 – eliminate classed argument from dup_mM*() and dependencies

maechler — Thu, 24 Aug 2006 16:21:18 +0000

maechler – 21 file(s) modified
eliminate classed argument from dup_mM*() and dependencies

~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/dppMatrix.c
~ /trunk/Matrix/src/dppMatrix.h
~ /trunk/Matrix/src/dspMatrix.c
~ /trunk/Matrix/src/dspMatrix.h
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/dtrMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h
~ /trunk/Matrix/src/sparseQR.c
~ /trunk/Matrix/src/sparseQR.h

Rev 3475 – Remove classes lCholCMatrix and dCholCMatrix, now using CHMfactor classes instead

bates — Wed, 23 Aug 2006 21:25:32 +0000

bates – 4 file(s) modified
Remove classes lCholCMatrix and dCholCMatrix, now using CHMfactor classes instead

~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 3468 – Comment out vestigial functions

bates — Tue, 22 Aug 2006 22:50:38 +0000

bates – 1 file(s) modified
Comment out vestigial functions

~ /trunk/Matrix/src/init.c

Rev 3460 – register dup_mMatrix_as_dgeMatrix for coercions.

bates — Tue, 22 Aug 2006 17:25:24 +0000

bates – 1 file(s) modified
register dup_mMatrix_as_dgeMatrix for coercions.

~ /trunk/Matrix/src/init.c

Rev 3438 – Added methods for sparseQR for qr.qy, qr.qty, qr.coef, qr.resid and ...

bates — Sun, 20 Aug 2006 03:17:19 +0000

bates – 6 file(s) modified
Added methods for sparseQR for qr.qy, qr.qty, qr.coef, qr.resid and qr.fitted

~ /trunk/Matrix/NAMESPACE
+ /trunk/Matrix/R/sparseQR.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf
+ /trunk/Matrix/src/sparseQR.c
+ /trunk/Matrix/src/sparseQR.h

Rev 3422 – Added solve methods for dgCMatrix and documentation

bates — Thu, 17 Aug 2006 22:30:01 +0000

bates – 6 file(s) modified
Added solve methods for dgCMatrix and documentation

~ /trunk/Matrix/man/dgCMatrix-class.Rd
+ /trunk/Matrix/man/qr-methods.Rd
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3420 – add sparse LU and QR decompositions

bates — Thu, 17 Aug 2006 13:57:53 +0000

bates – 11 file(s) modified
add sparse LU and QR decompositions

~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/lu.Rd
+ /trunk/Matrix/man/sparseLU-class.Rd
+ /trunk/Matrix/man/sparseQR-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/src/cs_utils.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3415 – Adding dgCMatrix_{lusol,qrsol,QR} but QR still not working

bates — Tue, 15 Aug 2006 22:31:30 +0000

bates – 7 file(s) modified
Adding dgCMatrix_{lusol,qrsol,QR} but QR still not working

~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/src/cs_utils.c
~ /trunk/Matrix/src/cs_utils.h
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3410 – eliminate sCMatrix_to_gCMatrix now that we have (almost identical) Csparse_symmetric_to_general

maechler — Tue, 15 Aug 2006 18:21:49 +0000

maechler – 6 file(s) modified
eliminate sCMatrix_to_gCMatrix now that we have (almost identical) Csparse_symmetric_to_general

~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3406 – Utilities Csparse_to_logical and Csparse_symmetric_to_general

bates — Mon, 14 Aug 2006 21:08:58 +0000

bates – 3 file(s) modified
Utilities Csparse_to_logical and Csparse_symmetric_to_general

~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/init.c

Rev 3404 – Use CHOLMOD code for general methods at CsparseMatrix, TsparseMatrix, denseMatrix ...

bates — Mon, 14 Aug 2006 18:54:04 +0000

bates – 10 file(s) modified
Use CHOLMOD code for general methods at CsparseMatrix, TsparseMatrix, denseMatrix or matrix level when possible

~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3401 – Generalize conversions

bates — Sat, 12 Aug 2006 17:31:39 +0000

bates – 19 file(s) modified
Generalize conversions

~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/chm_common.h
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dgTMatrix.h
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Tsparse.c
~ /trunk/Matrix/src/Tsparse.h

Rev 3339 – pass verbose argument to (gl)mer_MCMCsamp() and use it in C ...

maechler — Fri, 21 Jul 2006 08:28:18 +0000

maechler – 6 file(s) modified
pass verbose argument to (gl)mer_MCMCsamp() and use it in C code

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h
~ /trunk/Matrix/tests/lmer.R

Rev 3331 – Add coersion from CHMfactor to sparseMatrix

bates — Mon, 17 Jul 2006 18:34:45 +0000

bates – 7 file(s) modified
Add coersion from CHMfactor to sparseMatrix

~ /trunk/Matrix/man/CHMfactor-class.Rd
+ /trunk/Matrix/R/CHMfactor.R
+ /trunk/Matrix/src/CHMfactor.c
+ /trunk/Matrix/src/CHMfactor.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 3309 – add lgCMatrix_diag()

maechler — Mon, 10 Jul 2006 15:23:48 +0000

maechler – 6 file(s) modified
add lgCMatrix_diag()

~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lsparseMatrix.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lgCMatrix.c
~ /trunk/Matrix/src/lgCMatrix.h

Rev 3291 – mcmcsamp for glmer objects

bates — Thu, 06 Jul 2006 15:25:55 +0000

bates – 1 file(s) modified
mcmcsamp for glmer objects

~ /trunk/Matrix/src/init.c

Rev 3227 – Re-aligned deviance column in mcmcsamp output (and no longer use ...

bates — Sat, 10 Jun 2006 18:06:33 +0000

bates – 3 file(s) modified
Re-aligned deviance column in mcmcsamp output (and no longer use index of -1); added calculations of mer_hat_trace

~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h

Rev 3180 – Add isNested and for an identity permutation for nested grouping ...

bates — Sat, 27 May 2006 19:51:01 +0000

bates – 7 file(s) modified
Add isNested and for an identity permutation for nested grouping factors

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/INDEX
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h

Rev 3153 – Initial denom_df attempt

bates — Sat, 20 May 2006 11:34:18 +0000

bates – 4 file(s) modified
Initial denom_df attempt

~ /trunk/Matrix/INDEX
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h

Rev 3149 – some "sparse <-> graph" updates

maechler — Thu, 18 May 2006 06:47:09 +0000

maechler – 7 file(s) modified
some "sparse <-> graph" updates

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dgTMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/graph.R

Rev 3134 – Generics lowerTriMatrix and upperTriMatrix and C function Csparse_band

bates — Mon, 15 May 2006 22:36:59 +0000

bates – 6 file(s) modified
Generics lowerTriMatrix and upperTriMatrix and C function Csparse_band

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/init.c

Rev 3111 – Add chol method for pedigree objects

bates — Sun, 30 Apr 2006 15:39:44 +0000

bates – 5 file(s) modified
Add chol method for pedigree objects

~ /trunk/Matrix/R/pedigree.R
~ /trunk/Matrix/src/init.c
+ /trunk/Matrix/src/pedigree.c
+ /trunk/Matrix/src/pedigree.h
~ /trunk/Matrix/src/SOURCES_C.mkf

Rev 3070 – Add CSparse-based solve methods for dtCMatrix class

bates — Sat, 15 Apr 2006 13:08:26 +0000

bates – 5 file(s) modified
Add CSparse-based solve methods for dtCMatrix class

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/src/dtCMatrix.c
~ /trunk/Matrix/src/dtCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3065 – C code for inverse of sparse, unit, lower triangular matrices ...

bates — Thu, 13 Apr 2006 22:05:22 +0000

bates – 3 file(s) modified
C code for inverse of sparse, unit, lower triangular matrices (pattern only at present)

~ /trunk/Matrix/src/dtCMatrix.c
~ /trunk/Matrix/src/dtCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3054 – Added qqmath method for ranef.lmer and postVar for ranef methods

bates — Sun, 09 Apr 2006 00:02:26 +0000

bates – 9 file(s) modified
Added qqmath method for ranef.lmer and postVar for ranef methods

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/INDEX
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h
~ /trunk/Matrix/TODO

Rev 2304 – Used cholmod_vertcat and cholmod_horzcat for cbind2 and rbind2 in the ...

bates — Mon, 20 Feb 2006 22:47:20 +0000

bates – 6 file(s) modified
Used cholmod_vertcat and cholmod_horzcat for cbind2 and rbind2 in the dsparseMatrix virtual class

~ /trunk/Matrix/INDEX
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/init.c

Rev 2265 – Use coersion for transpose of dtCMatrix class

bates — Wed, 25 Jan 2006 23:42:57 +0000

bates – 4 file(s) modified
Use coersion for transpose of dtCMatrix class

~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/src/dtCMatrix.c
~ /trunk/Matrix/src/dtCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 2263 – Move dtTMatrix_to_dtCMatrix to CHOLMOD code

bates — Wed, 25 Jan 2006 15:19:29 +0000

bates – 5 file(s) modified
Move dtTMatrix_to_dtCMatrix to CHOLMOD code

~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/dtTMatrix.c
~ /trunk/Matrix/src/dtTMatrix.h
~ /trunk/Matrix/src/init.c

Rev 2254 – make_(triangular|symmetric) : now for ldense as well

maechler — Mon, 23 Jan 2006 16:01:20 +0000

maechler – 10 file(s) modified
make*_(triangular|symmetric) : now for ldense* as well

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/src/dsyMatrix.c
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/dtrMatrix.h
~ /trunk/Matrix/src/factorizations.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/ldense.c
~ /trunk/Matrix/src/ldense.h
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h

Rev 2200 – Removing rcond slot from Matrix objects

bates — Sun, 15 Jan 2006 21:13:54 +0000

bates – 15 file(s) modified
Removing rcond slot from Matrix objects

~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dpoMatrix.c
~ /trunk/Matrix/src/dppMatrix.c
~ /trunk/Matrix/src/dspMatrix.c
~ /trunk/Matrix/src/dsyMatrix.c
~ /trunk/Matrix/src/dtpMatrix.c
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Syms.h
~ /trunk/Matrix/tests/dpoMatrix.R
x /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/dtpMatrix.R

Rev 2197 – new dMatrix_validate and dense_nonpacked_validate

maechler — Sat, 14 Jan 2006 23:40:42 +0000

maechler – 7 file(s) modified
new dMatrix_validate and dense_nonpacked_validate

~ /trunk/Matrix/src/dgeMatrix.c
~ /trunk/Matrix/src/dgeMatrix.h
~ /trunk/Matrix/src/dsyMatrix.c
~ /trunk/Matrix/src/dtrMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h

Rev 2194 – Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs

bates — Fri, 13 Jan 2006 23:47:38 +0000

bates – 10 file(s) modified
Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs

~ /trunk/Matrix/INDEX
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/chm_common.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h
~ /trunk/Matrix/tests/lmer.R

R-packages – /branches/Matrix-for-R-2.3.x/src/init.c

Rev 3543 – branching an "old-R" compatible version of Matrix

Rev 3522 – housekeeping

Rev 3514 – Remove vestigial classed argument for dsCMatrix_matrix_solve

Rev 3508 – Added triu, tril and band for ddenseMatrix objects.

Rev 3505 – Added initial version of dgeMatrix_band but may change design

Rev 3502 – Move methods to the CsparseMatrix class

Rev 3501 – use setAs("ddenseMatrix", "dgeMatrix", *) instead of older specific ones

Rev 3488 – Use dup_mMatrix_as_dgeMatrix

Rev 3484 – eliminate classed argument from dup_mM*() and dependencies

Rev 3475 – Remove classes lCholCMatrix and dCholCMatrix, now using CHMfactor classes instead

Rev 3468 – Comment out vestigial functions

Rev 3460 – register dup_mMatrix_as_dgeMatrix for coercions.

Rev 3438 – Added methods for sparseQR for qr.qy, qr.qty, qr.coef, qr.resid and ...

Rev 3422 – Added solve methods for dgCMatrix and documentation

Rev 3420 – add sparse LU and QR decompositions

Rev 3415 – Adding dgCMatrix_{lusol,qrsol,QR} but QR still not working

Rev 3410 – eliminate sCMatrix_to_gCMatrix now that we have (almost identical) Csparse_symmetric_to_general

Rev 3406 – Utilities Csparse_to_logical and Csparse_symmetric_to_general

Rev 3404 – Use CHOLMOD code for general methods at CsparseMatrix, TsparseMatrix, denseMatrix ...

Rev 3401 – Generalize conversions

Rev 3339 – pass verbose argument to (gl)mer_MCMCsamp() and use it in C ...

Rev 3331 – Add coersion from CHMfactor to sparseMatrix

Rev 3309 – add lgCMatrix_diag()

Rev 3291 – mcmcsamp for glmer objects

Rev 3227 – Re-aligned deviance column in mcmcsamp output (and no longer use ...

Rev 3180 – Add isNested and for an identity permutation for nested grouping ...

Rev 3153 – Initial denom_df attempt

Rev 3149 – some "sparse <-> graph" updates

Rev 3134 – Generics lowerTriMatrix and upperTriMatrix and C function Csparse_band

Rev 3111 – Add chol method for pedigree objects

Rev 3070 – Add CSparse-based solve methods for dtCMatrix class

Rev 3065 – C code for inverse of sparse, unit, lower triangular matrices ...

Rev 3054 – Added qqmath method for ranef.lmer and postVar for ranef methods

Rev 2304 – Used cholmod_vertcat and cholmod_horzcat for cbind2 and rbind2 in the ...

Rev 2265 – Use coersion for transpose of dtCMatrix class

Rev 2263 – Move dtTMatrix_to_dtCMatrix to CHOLMOD code

Rev 2254 – make*_(triangular|symmetric) : now for ldense* as well

Rev 2200 – Removing rcond slot from Matrix objects

Rev 2197 – new dMatrix_validate and dense_nonpacked_validate

Rev 2194 – Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs

Rev 2254 – make_(triangular|symmetric) : now for ldense as well