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3543 7268 d 1 h maechler /branches/Matrix-for-R-2.3.x/ branching an "old-R" compatible version of Matrix  
/branches/Matrix-for-R-2.3.x
3520 7271 d 19 h bates /trunk/Matrix/ Promotion of %*% and solve to RHS of ddenseMatrix  
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtpMatrix-class.Rd
/trunk/Matrix/man/dtrMatrix-class.Rd
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dspMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtpMatrix.h
/trunk/Matrix/src/dtrMatrix.c
3518 7272 d 2 h bates /trunk/Matrix/src/ Define and use class_P and mMatrix_as_dgeMatrix  
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/cs_utils.c
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dsCMatrix.c
3503 7275 d 5 h bates /trunk/Matrix/src/ Remove sections of code that are no longer used  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dsTMatrix.h
/trunk/Matrix/src/dtTMatrix.h
/trunk/Matrix/src/lgCMatrix.c
/trunk/Matrix/src/lgCMatrix.h
3493 7276 d 20 h bates /trunk/Matrix/src/ Add ddiMatrix,dtpMatrix, dspMatrix and dppMatrix conversions. Remove no-longer-used functions.  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
3484 7277 d 2 h maechler /trunk/Matrix/ eliminate classed argument from dup_mM*() and dependencies  
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dppMatrix.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dspMatrix.h
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/dtrMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/sparseQR.c
/trunk/Matrix/src/sparseQR.h
3463 7278 d 19 h bates /trunk/Matrix/src/ Move check_class to Mutils.h and some bug fixes  
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/chm_common.c
3437 7281 d 15 h bates /trunk/Matrix/src/ Added dup_mMatrix_as_dgeMatrix utility  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
3433 7282 d 6 h maechler /trunk/Matrix/ add comment on why Rdefines.h  
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/src/Mutils.h
2254 7490 d 2 h maechler /trunk/Matrix/ make*_(triangular|symmetric) : now for ldense* as well  
/trunk/Matrix/ChangeLog
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/dtrMatrix.h
/trunk/Matrix/src/factorizations.c
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ldense.c
/trunk/Matrix/src/ldense.h
2197 7498 d 18 h maechler /trunk/Matrix/src/ new dMatrix_validate and dense_nonpacked_validate  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
2194 7499 d 18 h bates /trunk/Matrix/ Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs  
/trunk/Matrix/INDEX
/trunk/Matrix/R/lmer.R
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
/trunk/Matrix/tests/lmer.R
1876 7602 d 16 h bates /trunk/Matrix/ Modifications to mer2  
/trunk/Matrix/INDEX
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
1864 7606 d 23 h maechler /trunk/Matrix/src/ packed_to_full_(double|int) and full_to_packed_*  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/ldense.c
1862 7607 d 5 h maechler /trunk/Matrix/src/ use uplo_P() and diag_P() macros instead of *_value() functions  
/trunk/Matrix/src/HBMM.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/lgCMatrix.c
/trunk/Matrix/src/lsCMatrix.c
/trunk/Matrix/src/ltCMatrix.c
1854 7607 d 9 h maechler /trunk/Matrix/src/ + uplo_value(), diag_value()  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
1781 7634 d 1 h maechler /trunk/Matrix/ add triangularMatrix_validate and symmetric* to C code and make (re!)use of it - not quite everywhere?  
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dpoMatrix.Rout.save
1735 7647 d 20 h bates /trunk/Matrix/ Coercion method for graphNEL to sparseMatrix class  
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
1631 7693 d 3 h bates /trunk/Matrix/src/ Added utilities vecSum and vecIncrement  
/trunk/Matrix/src/Mutils.h
1577 7719 d 19 h bates /trunk/Matrix/src/ Isolating and cleaning up the mer, lmer, and glmer functions  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h

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