Rev 1196 | Blame | Compare with Previous | Last modification | View Log | Download | RSS feed
/** Copyright 1997, Regents of the University of Minnesota** subdomains.c** This file contains functions that deal with prunning the number of* adjacent subdomains in KMETIS** Started 7/15/98* George** $Id: subdomains.c,v 1.1 2003/12/31 21:32:30 bates Exp $**/#include <metis.h>/************************************************************************** This function performs k-way refinement**************************************************************************/void Random_KWayEdgeRefineMConn(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, float ubfactor, int npasses, int ffactor){int i, ii, iii, j/* , jj */, k, l, pass, nvtxs, nmoves, nbnd, tvwgt, myndegrees;int from, me, to, oldcut, vwgt, gain;int maxndoms, nadd;idxtype *xadj, *adjncy, *adjwgt;idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts;idxtype *phtable, *pmat, *pmatptr, *ndoms;EDegreeType *myedegrees;RInfoType *myrinfo;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;adjwgt = graph->adjwgt;bndptr = graph->bndptr;bndind = graph->bndind;where = graph->where;pwgts = graph->pwgts;pmat = ctrl->wspace.pmat;phtable = idxwspacemalloc(ctrl, nparts);ndoms = idxwspacemalloc(ctrl, nparts);ComputeSubDomainGraph(graph, nparts, pmat, ndoms);/* Setup the weight intervals of the various subdomains */minwgt = idxwspacemalloc(ctrl, nparts);maxwgt = idxwspacemalloc(ctrl, nparts);itpwgts = idxwspacemalloc(ctrl, nparts);tvwgt = idxsum(nparts, pwgts);ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt));for (i=0; i<nparts; i++) {itpwgts[i] = tpwgts[i]*tvwgt;maxwgt[i] = tpwgts[i]*tvwgt*ubfactor;minwgt[i] = tpwgts[i]*tvwgt*(1.0/ubfactor);}perm = idxwspacemalloc(ctrl, nvtxs);IFSET(ctrl->dbglvl, DBG_REFINE,printf("Partitions: [%6d %6d]-[%6d %6d], Balance: %5.3f, Nv-Nb[%6d %6d]. Cut: %6d\n",pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0],1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd,graph->mincut));for (pass=0; pass<npasses; pass++) {ASSERT(ComputeCut(graph, where) == graph->mincut);maxndoms = ndoms[idxamax(nparts, ndoms)];oldcut = graph->mincut;nbnd = graph->nbnd;RandomPermute(nbnd, perm, 1);for (nmoves=iii=0; iii<graph->nbnd; iii++) {ii = perm[iii];if (ii >= nbnd)continue;i = bndind[ii];myrinfo = graph->rinfo+i;if (myrinfo->ed >= myrinfo->id) { /* Total ED is too high */from = where[i];vwgt = graph->vwgt[i];if (myrinfo->id > 0 && pwgts[from]-vwgt < minwgt[from])continue; /* This cannot be moved! */myedegrees = myrinfo->edegrees;myndegrees = myrinfo->ndegrees;/* Determine the valid domains */for (j=0; j<myndegrees; j++) {to = myedegrees[j].pid;phtable[to] = 1;pmatptr = pmat + to*nparts;for (nadd=0, k=0; k<myndegrees; k++) {if (k == j)continue;l = myedegrees[k].pid;if (pmatptr[l] == 0) {if (ndoms[l] > maxndoms-1) {phtable[to] = 0;nadd = maxndoms;break;}nadd++;}}if (ndoms[to]+nadd > maxndoms)phtable[to] = 0;if (nadd == 0)phtable[to] = 2;}/* Find the first valid move */j = myrinfo->id;for (k=0; k<myndegrees; k++) {to = myedegrees[k].pid;if (!phtable[to])continue;gain = myedegrees[k].ed-j; /* j = myrinfo->id. Allow good nodes to move */if (pwgts[to]+vwgt <= maxwgt[to]+ffactor*gain && gain >= 0)break;}if (k == myndegrees)continue; /* break out if you did not find a candidate */for (j=k+1; j<myndegrees; j++) {to = myedegrees[j].pid;if (!phtable[to])continue;if ((myedegrees[j].ed > myedegrees[k].ed && pwgts[to]+vwgt <= maxwgt[to]) ||(myedegrees[j].ed == myedegrees[k].ed &&itpwgts[myedegrees[k].pid]*pwgts[to] < itpwgts[to]*pwgts[myedegrees[k].pid]))k = j;}to = myedegrees[k].pid;j = 0;if (myedegrees[k].ed-myrinfo->id > 0)j = 1;else if (myedegrees[k].ed-myrinfo->id == 0) {if (/*(iii&7) == 0 ||*/ phtable[myedegrees[k].pid] == 2 || pwgts[from] >= maxwgt[from] || itpwgts[from]*(pwgts[to]+vwgt) < itpwgts[to]*pwgts[from])j = 1;}if (j == 0)continue;/*=====================================================================* If we got here, we can now move the vertex from 'from' to 'to'*======================================================================*/graph->mincut -= myedegrees[k].ed-myrinfo->id;IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d to %3d. Gain: %4d. Cut: %6d\n", i, to, myedegrees[k].ed-myrinfo->id, graph->mincut));/* Update pmat to reflect the move of 'i' */pmat[from*nparts+to] += (myrinfo->id-myedegrees[k].ed);pmat[to*nparts+from] += (myrinfo->id-myedegrees[k].ed);if (pmat[from*nparts+to] == 0) {ndoms[from]--;if (ndoms[from]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}if (pmat[to*nparts+from] == 0) {ndoms[to]--;if (ndoms[to]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}/* Update where, weight, and ID/ED information of the vertex you moved */where[i] = to;INC_DEC(pwgts[to], pwgts[from], vwgt);myrinfo->ed += myrinfo->id-myedegrees[k].ed;SWAP(myrinfo->id, myedegrees[k].ed, j);if (myedegrees[k].ed == 0)myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].pid = from;if (myrinfo->ed-myrinfo->id < 0)BNDDelete(nbnd, bndind, bndptr, i);/* Update the degrees of adjacent vertices */for (j=xadj[i]; j<xadj[i+1]; j++) {ii = adjncy[j];me = where[ii];myrinfo = graph->rinfo+ii;if (myrinfo->edegrees == NULL) {myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];}myedegrees = myrinfo->edegrees;ASSERT(CheckRInfo(myrinfo));if (me == from) {INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);if (myrinfo->ed-myrinfo->id >= 0 && bndptr[ii] == -1)BNDInsert(nbnd, bndind, bndptr, ii);}else if (me == to) {INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);if (myrinfo->ed-myrinfo->id < 0 && bndptr[ii] != -1)BNDDelete(nbnd, bndind, bndptr, ii);}/* Remove contribution from the .ed of 'from' */if (me != from) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == from) {if (myedegrees[k].ed == adjwgt[j])myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].ed -= adjwgt[j];break;}}}/* Add contribution to the .ed of 'to' */if (me != to) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == to) {myedegrees[k].ed += adjwgt[j];break;}}if (k == myrinfo->ndegrees) {myedegrees[myrinfo->ndegrees].pid = to;myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];}}/* Update pmat to reflect the move of 'i' for domains other than 'from' and 'to' */if (me != from && me != to) {pmat[me*nparts+from] -= adjwgt[j];pmat[from*nparts+me] -= adjwgt[j];if (pmat[me*nparts+from] == 0) {ndoms[me]--;if (ndoms[me]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}if (pmat[from*nparts+me] == 0) {ndoms[from]--;if (ndoms[from]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}if (pmat[me*nparts+to] == 0) {ndoms[me]++;if (ndoms[me] > maxndoms) {printf("You just increased the maxndoms: %d %d\n", ndoms[me], maxndoms);maxndoms = ndoms[me];}}if (pmat[to*nparts+me] == 0) {ndoms[to]++;if (ndoms[to] > maxndoms) {printf("You just increased the maxndoms: %d %d\n", ndoms[to], maxndoms);maxndoms = ndoms[to];}}pmat[me*nparts+to] += adjwgt[j];pmat[to*nparts+me] += adjwgt[j];}ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]);ASSERT(CheckRInfo(myrinfo));}nmoves++;}}graph->nbnd = nbnd;IFSET(ctrl->dbglvl, DBG_REFINE,printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %5d, Vol: %5d, %d\n",pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)],1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves,graph->mincut, ComputeVolume(graph, where), idxsum(nparts, ndoms)));if (graph->mincut == oldcut)break;}idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nvtxs);}/************************************************************************** This function performs k-way refinement**************************************************************************/void Greedy_KWayEdgeBalanceMConn(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, float ubfactor, int npasses){int i, ii/* , iii */, j/* , jj */, k, l, pass, nvtxs, nbnd, tvwgt,myndegrees, oldgain, gain, nmoves;int from, me, to, oldcut, vwgt, maxndoms, nadd;idxtype *xadj, *adjncy, *adjwgt;idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *moved, *itpwgts;idxtype *phtable, *pmat, *pmatptr, *ndoms;EDegreeType *myedegrees;RInfoType *myrinfo;PQueueType queue;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;adjwgt = graph->adjwgt;bndind = graph->bndind;bndptr = graph->bndptr;where = graph->where;pwgts = graph->pwgts;pmat = ctrl->wspace.pmat;phtable = idxwspacemalloc(ctrl, nparts);ndoms = idxwspacemalloc(ctrl, nparts);ComputeSubDomainGraph(graph, nparts, pmat, ndoms);/* Setup the weight intervals of the various subdomains */minwgt = idxwspacemalloc(ctrl, nparts);maxwgt = idxwspacemalloc(ctrl, nparts);itpwgts = idxwspacemalloc(ctrl, nparts);tvwgt = idxsum(nparts, pwgts);ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt));for (i=0; i<nparts; i++) {itpwgts[i] = tpwgts[i]*tvwgt;maxwgt[i] = tpwgts[i]*tvwgt*ubfactor;minwgt[i] = tpwgts[i]*tvwgt*(1.0/ubfactor);}perm = idxwspacemalloc(ctrl, nvtxs);moved = idxwspacemalloc(ctrl, nvtxs);PQueueInit(ctrl, &queue, nvtxs, graph->adjwgtsum[idxamax(nvtxs, graph->adjwgtsum)]);IFSET(ctrl->dbglvl, DBG_REFINE,printf("Partitions: [%6d %6d]-[%6d %6d], Balance: %5.3f, Nv-Nb[%6d %6d]. Cut: %6d [B]\n",pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0],1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd,graph->mincut));for (pass=0; pass<npasses; pass++) {ASSERT(ComputeCut(graph, where) == graph->mincut);/* Check to see if things are out of balance, given the tolerance */for (i=0; i<nparts; i++) {if (pwgts[i] > maxwgt[i])break;}if (i == nparts) /* Things are balanced. Return right away */break;PQueueReset(&queue);idxset(nvtxs, -1, moved);oldcut = graph->mincut;nbnd = graph->nbnd;RandomPermute(nbnd, perm, 1);for (ii=0; ii<nbnd; ii++) {i = bndind[perm[ii]];PQueueInsert(&queue, i, graph->rinfo[i].ed - graph->rinfo[i].id);moved[i] = 2;}maxndoms = ndoms[idxamax(nparts, ndoms)];for (nmoves=0;;) {if ((i = PQueueGetMax(&queue)) == -1)break;moved[i] = 1;myrinfo = graph->rinfo+i;from = where[i];vwgt = graph->vwgt[i];if (pwgts[from]-vwgt < minwgt[from])continue; /* This cannot be moved! */myedegrees = myrinfo->edegrees;myndegrees = myrinfo->ndegrees;/* Determine the valid domains */for (j=0; j<myndegrees; j++) {to = myedegrees[j].pid;phtable[to] = 1;pmatptr = pmat + to*nparts;for (nadd=0, k=0; k<myndegrees; k++) {if (k == j)continue;l = myedegrees[k].pid;if (pmatptr[l] == 0) {if (ndoms[l] > maxndoms-1) {phtable[to] = 0;nadd = maxndoms;break;}nadd++;}}if (ndoms[to]+nadd > maxndoms)phtable[to] = 0;}for (k=0; k<myndegrees; k++) {to = myedegrees[k].pid;if (!phtable[to])continue;if (pwgts[to]+vwgt <= maxwgt[to] || itpwgts[from]*(pwgts[to]+vwgt) <= itpwgts[to]*pwgts[from])break;}if (k == myndegrees)continue; /* break out if you did not find a candidate */for (j=k+1; j<myndegrees; j++) {to = myedegrees[j].pid;if (!phtable[to])continue;if (itpwgts[myedegrees[k].pid]*pwgts[to] < itpwgts[to]*pwgts[myedegrees[k].pid])k = j;}to = myedegrees[k].pid;if (pwgts[from] < maxwgt[from] && pwgts[to] > minwgt[to] && myedegrees[k].ed-myrinfo->id < 0)continue;/*=====================================================================* If we got here, we can now move the vertex from 'from' to 'to'*======================================================================*/graph->mincut -= myedegrees[k].ed-myrinfo->id;IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d to %3d. Gain: %4d. Cut: %6d\n", i, to, myedegrees[k].ed-myrinfo->id, graph->mincut));/* Update pmat to reflect the move of 'i' */pmat[from*nparts+to] += (myrinfo->id-myedegrees[k].ed);pmat[to*nparts+from] += (myrinfo->id-myedegrees[k].ed);if (pmat[from*nparts+to] == 0) {ndoms[from]--;if (ndoms[from]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}if (pmat[to*nparts+from] == 0) {ndoms[to]--;if (ndoms[to]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}/* Update where, weight, and ID/ED information of the vertex you moved */where[i] = to;INC_DEC(pwgts[to], pwgts[from], vwgt);myrinfo->ed += myrinfo->id-myedegrees[k].ed;SWAP(myrinfo->id, myedegrees[k].ed, j);if (myedegrees[k].ed == 0)myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].pid = from;if (myrinfo->ed == 0)BNDDelete(nbnd, bndind, bndptr, i);/* Update the degrees of adjacent vertices */for (j=xadj[i]; j<xadj[i+1]; j++) {ii = adjncy[j];me = where[ii];myrinfo = graph->rinfo+ii;if (myrinfo->edegrees == NULL) {myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];}myedegrees = myrinfo->edegrees;ASSERT(CheckRInfo(myrinfo));oldgain = (myrinfo->ed-myrinfo->id);if (me == from) {INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);if (myrinfo->ed > 0 && bndptr[ii] == -1)BNDInsert(nbnd, bndind, bndptr, ii);}else if (me == to) {INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);if (myrinfo->ed == 0 && bndptr[ii] != -1)BNDDelete(nbnd, bndind, bndptr, ii);}/* Remove contribution from the .ed of 'from' */if (me != from) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == from) {if (myedegrees[k].ed == adjwgt[j])myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].ed -= adjwgt[j];break;}}}/* Add contribution to the .ed of 'to' */if (me != to) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == to) {myedegrees[k].ed += adjwgt[j];break;}}if (k == myrinfo->ndegrees) {myedegrees[myrinfo->ndegrees].pid = to;myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];}}/* Update pmat to reflect the move of 'i' for domains other than 'from' and 'to' */if (me != from && me != to) {pmat[me*nparts+from] -= adjwgt[j];pmat[from*nparts+me] -= adjwgt[j];if (pmat[me*nparts+from] == 0) {ndoms[me]--;if (ndoms[me]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}if (pmat[from*nparts+me] == 0) {ndoms[from]--;if (ndoms[from]+1 == maxndoms)maxndoms = ndoms[idxamax(nparts, ndoms)];}if (pmat[me*nparts+to] == 0) {ndoms[me]++;if (ndoms[me] > maxndoms) {printf("You just increased the maxndoms: %d %d\n", ndoms[me], maxndoms);maxndoms = ndoms[me];}}if (pmat[to*nparts+me] == 0) {ndoms[to]++;if (ndoms[to] > maxndoms) {printf("You just increased the maxndoms: %d %d\n", ndoms[to], maxndoms);maxndoms = ndoms[to];}}pmat[me*nparts+to] += adjwgt[j];pmat[to*nparts+me] += adjwgt[j];}/* Update the queue */if (me == to || me == from) {gain = myrinfo->ed-myrinfo->id;if (moved[ii] == 2) {if (myrinfo->ed > 0)PQueueUpdate(&queue, ii, oldgain, gain);else {PQueueDelete(&queue, ii, oldgain);moved[ii] = -1;}}else if (moved[ii] == -1 && myrinfo->ed > 0) {PQueueInsert(&queue, ii, gain);moved[ii] = 2;}}ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]);ASSERT(CheckRInfo(myrinfo));}nmoves++;}graph->nbnd = nbnd;IFSET(ctrl->dbglvl, DBG_REFINE,printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d, %d\n",pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)],1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut,idxsum(nparts, ndoms)));}PQueueFree(ctrl, &queue);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nvtxs);idxwspacefree(ctrl, nvtxs);}/************************************************************************** This function computes the subdomain graph**************************************************************************/void PrintSubDomainGraph(GraphType *graph, int nparts, idxtype *where){int i, j, k, me, nvtxs, total, max;idxtype *xadj, *adjncy, *adjwgt, *pmat;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;adjwgt = graph->adjwgt;pmat = idxsmalloc(nparts*nparts, 0, "ComputeSubDomainGraph: pmat");for (i=0; i<nvtxs; i++) {me = where[i];for (j=xadj[i]; j<xadj[i+1]; j++) {k = adjncy[j];if (where[k] != me)pmat[me*nparts+where[k]] += adjwgt[j];}}/* printf("Subdomain Info\n"); */total = max = 0;for (i=0; i<nparts; i++) {for (k=0, j=0; j<nparts; j++) {if (pmat[i*nparts+j] > 0)k++;}total += k;if (k > max)max = k;/*printf("%2d -> %2d ", i, k);for (j=0; j<nparts; j++) {if (pmat[i*nparts+j] > 0)printf("[%2d %4d] ", j, pmat[i*nparts+j]);}printf("\n");*/}printf("Total adjacent subdomains: %d, Max: %d\n", total, max);free(pmat);}/************************************************************************** This function computes the subdomain graph**************************************************************************/void ComputeSubDomainGraph(GraphType *graph, int nparts, idxtype *pmat, idxtype *ndoms){int i, j, k, me, nvtxs, ndegrees;idxtype *xadj, *adjncy, *adjwgt, *where;RInfoType *rinfo;EDegreeType *edegrees;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;adjwgt = graph->adjwgt;where = graph->where;rinfo = graph->rinfo;idxset(nparts*nparts, 0, pmat);for (i=0; i<nvtxs; i++) {if (rinfo[i].ed > 0) {me = where[i];ndegrees = rinfo[i].ndegrees;edegrees = rinfo[i].edegrees;k = me*nparts;for (j=0; j<ndegrees; j++)pmat[k+edegrees[j].pid] += edegrees[j].ed;}}for (i=0; i<nparts; i++) {ndoms[i] = 0;for (j=0; j<nparts; j++) {if (pmat[i*nparts+j] > 0)ndoms[i]++;}}}/************************************************************************** This function computes the subdomain graph**************************************************************************/void EliminateSubDomainEdges(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts){int i, ii, j, k, me, other, nvtxs, total, max, avg, totalout, nind, ncand, ncand2, target, target2, nadd;int min, move, cpwgt, tvwgt;idxtype *xadj, *adjncy, *vwgt, *adjwgt, *pwgts, *where, *maxpwgt, *pmat, *ndoms, *mypmat, *otherpmat, *ind;KeyValueType *cand, *cand2;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;vwgt = graph->vwgt;adjwgt = graph->adjwgt;where = graph->where;pwgts = graph->pwgts; /* We assume that this is properly initialized */maxpwgt = idxwspacemalloc(ctrl, nparts);ndoms = idxwspacemalloc(ctrl, nparts);otherpmat = idxwspacemalloc(ctrl, nparts);ind = idxwspacemalloc(ctrl, nvtxs);pmat = ctrl->wspace.pmat;cand = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand");cand2 = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand");/* Compute the pmat matrix and ndoms */ComputeSubDomainGraph(graph, nparts, pmat, ndoms);/* Compute the maximum allowed weight for each domain */tvwgt = idxsum(nparts, pwgts);for (i=0; i<nparts; i++)maxpwgt[i] = 1.25*tpwgts[i]*tvwgt;/* Get into the loop eliminating subdomain connections */for (;;) {total = idxsum(nparts, ndoms);avg = total/nparts;max = ndoms[idxamax(nparts, ndoms)];/* printf("Adjacent Subdomain Stats: Total: %3d, Max: %3d, Avg: %3d [%5d]\n", total, max, avg, idxsum(nparts*nparts, pmat)); */if (max < 1.4*avg)break;me = idxamax(nparts, ndoms);mypmat = pmat + me*nparts;totalout = idxsum(nparts, mypmat);/*printf("Me: %d, TotalOut: %d,\n", me, totalout);*//* Sort the connections according to their cut */for (ncand2=0, i=0; i<nparts; i++) {if (mypmat[i] > 0) {cand2[ncand2].key = mypmat[i];cand2[ncand2++].val = i;}}ikeysort(ncand2, cand2);move = 0;for (min=0; min<ncand2; min++) {if (cand2[min].key > totalout/(2*ndoms[me]))break;other = cand2[min].val;/*printf("\tMinOut: %d to %d\n", mypmat[other], other);*/idxset(nparts, 0, otherpmat);/* Go and find the vertices in 'other' that are connected in 'me' */for (nind=0, i=0; i<nvtxs; i++) {if (where[i] == other) {for (j=xadj[i]; j<xadj[i+1]; j++) {if (where[adjncy[j]] == me) {ind[nind++] = i;break;}}}}/* Go and construct the otherpmat to see where these nind vertices are connected to */for (cpwgt=0, ii=0; ii<nind; ii++) {i = ind[ii];cpwgt += vwgt[i];for (j=xadj[i]; j<xadj[i+1]; j++)otherpmat[where[adjncy[j]]] += adjwgt[j];}otherpmat[other] = 0;for (ncand=0, i=0; i<nparts; i++) {if (otherpmat[i] > 0) {cand[ncand].key = -otherpmat[i];cand[ncand++].val = i;}}ikeysort(ncand, cand);/** Go through and the select the first domain that is common with 'me', and* does not increase the ndoms[target] higher than my ndoms, subject to the* maxpwgt constraint. Traversal is done from the mostly connected to the least.*/target = target2 = -1;for (i=0; i<ncand; i++) {k = cand[i].val;if (mypmat[k] > 0) {if (pwgts[k] + cpwgt > maxpwgt[k]) /* Check if balance will go off */continue;for (j=0; j<nparts; j++) {if (otherpmat[j] > 0 && ndoms[j] >= ndoms[me]-1 && pmat[nparts*j+k] == 0)break;}if (j == nparts) { /* No bad second level effects */for (nadd=0, j=0; j<nparts; j++) {if (otherpmat[j] > 0 && pmat[nparts*k+j] == 0)nadd++;}/*printf("\t\tto=%d, nadd=%d, %d\n", k, nadd, ndoms[k]);*/if (target2 == -1 && ndoms[k]+nadd < ndoms[me]) {target2 = k;}if (nadd == 0) {target = k;break;}}}}if (target == -1 && target2 != -1)target = target2;if (target == -1) {/* printf("\t\tCould not make the move\n");*/continue;}/*printf("\t\tMoving to %d\n", target);*//* Update the partition weights */INC_DEC(pwgts[target], pwgts[other], cpwgt);MoveGroupMConn(ctrl, graph, ndoms, pmat, nparts, target, nind, ind);move = 1;break;}if (move == 0)break;}idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nvtxs);GKfree(&cand, &cand2, LTERM);}/************************************************************************** This function moves a collection of vertices and updates their rinfo**************************************************************************/void MoveGroupMConn(CtrlType *ctrl, GraphType *graph, idxtype *ndoms, idxtype *pmat,int nparts, int to, int nind, idxtype *ind){int i, ii, iii, j/* , jj */, k/* , l */, nvtxs, nbnd/* , myndegrees */;int from, me;idxtype *xadj, *adjncy, *adjwgt;idxtype *where, *bndptr, *bndind;EDegreeType *myedegrees;RInfoType *myrinfo;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;adjwgt = graph->adjwgt;where = graph->where;bndptr = graph->bndptr;bndind = graph->bndind;nbnd = graph->nbnd;for (iii=0; iii<nind; iii++) {i = ind[iii];from = where[i];myrinfo = graph->rinfo+i;if (myrinfo->edegrees == NULL) {myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;ctrl->wspace.cdegree += xadj[i+1]-xadj[i];myrinfo->ndegrees = 0;}myedegrees = myrinfo->edegrees;/* find the location of 'to' in myrinfo or create it if it is not there */for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == to)break;}if (k == myrinfo->ndegrees) {myedegrees[k].pid = to;myedegrees[k].ed = 0;myrinfo->ndegrees++;}graph->mincut -= myedegrees[k].ed-myrinfo->id;/* Update pmat to reflect the move of 'i' */pmat[from*nparts+to] += (myrinfo->id-myedegrees[k].ed);pmat[to*nparts+from] += (myrinfo->id-myedegrees[k].ed);if (pmat[from*nparts+to] == 0)ndoms[from]--;if (pmat[to*nparts+from] == 0)ndoms[to]--;/* Update where, weight, and ID/ED information of the vertex you moved */where[i] = to;myrinfo->ed += myrinfo->id-myedegrees[k].ed;SWAP(myrinfo->id, myedegrees[k].ed, j);if (myedegrees[k].ed == 0)myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].pid = from;if (myrinfo->ed-myrinfo->id < 0 && bndptr[i] != -1)BNDDelete(nbnd, bndind, bndptr, i);/* Update the degrees of adjacent vertices */for (j=xadj[i]; j<xadj[i+1]; j++) {ii = adjncy[j];me = where[ii];myrinfo = graph->rinfo+ii;if (myrinfo->edegrees == NULL) {myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];}myedegrees = myrinfo->edegrees;ASSERT(CheckRInfo(myrinfo));if (me == from) {INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);if (myrinfo->ed-myrinfo->id >= 0 && bndptr[ii] == -1)BNDInsert(nbnd, bndind, bndptr, ii);}else if (me == to) {INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);if (myrinfo->ed-myrinfo->id < 0 && bndptr[ii] != -1)BNDDelete(nbnd, bndind, bndptr, ii);}/* Remove contribution from the .ed of 'from' */if (me != from) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == from) {if (myedegrees[k].ed == adjwgt[j])myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].ed -= adjwgt[j];break;}}}/* Add contribution to the .ed of 'to' */if (me != to) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == to) {myedegrees[k].ed += adjwgt[j];break;}}if (k == myrinfo->ndegrees) {myedegrees[myrinfo->ndegrees].pid = to;myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];}}/* Update pmat to reflect the move of 'i' for domains other than 'from' and 'to' */if (me != from && me != to) {pmat[me*nparts+from] -= adjwgt[j];pmat[from*nparts+me] -= adjwgt[j];if (pmat[me*nparts+from] == 0)ndoms[me]--;if (pmat[from*nparts+me] == 0)ndoms[from]--;if (pmat[me*nparts+to] == 0)ndoms[me]++;if (pmat[to*nparts+me] == 0)ndoms[to]++;pmat[me*nparts+to] += adjwgt[j];pmat[to*nparts+me] += adjwgt[j];}ASSERT(CheckRInfo(myrinfo));}ASSERT(CheckRInfo(graph->rinfo+i));}graph->nbnd = nbnd;}/************************************************************************** This function finds all the connected components induced by the* partitioning vector in wgraph->where and tries to push them around to* remove some of them**************************************************************************/void EliminateComponents(CtrlType *ctrl, GraphType *graph, int nparts,float *tpwgts, float ubfactor){int i, ii, j, jj, k, me= -1/*-Wall*/, nvtxs, tvwgt, first, last,nleft, ncmps, cwgt/* , other */, target, deltawgt;idxtype *xadj, *adjncy, *vwgt, *adjwgt, *where, *pwgts, *maxpwgt;idxtype *cpvec, *touched, *perm, *todo, *cind, *cptr, *npcmps;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;vwgt = graph->vwgt;adjwgt = graph->adjwgt;where = graph->where;pwgts = graph->pwgts;touched = idxset(nvtxs, 0, idxwspacemalloc(ctrl, nvtxs));cptr = idxwspacemalloc(ctrl, nvtxs);cind = idxwspacemalloc(ctrl, nvtxs);perm = idxwspacemalloc(ctrl, nvtxs);todo = idxwspacemalloc(ctrl, nvtxs);maxpwgt = idxwspacemalloc(ctrl, nparts);cpvec = idxwspacemalloc(ctrl, nparts);npcmps = idxset(nparts, 0, idxwspacemalloc(ctrl, nparts));for (i=0; i<nvtxs; i++)perm[i] = todo[i] = i;/* Find the connected componends induced by the partition */ncmps = -1;first = last = 0;nleft = nvtxs;while (nleft > 0) {if (first == last) { /* Find another starting vertex */cptr[++ncmps] = first;ASSERT(touched[todo[0]] == 0);i = todo[0];cind[last++] = i;touched[i] = 1;me = where[i];npcmps[me]++;}i = cind[first++];k = perm[i];j = todo[k] = todo[--nleft];perm[j] = k;for (j=xadj[i]; j<xadj[i+1]; j++) {k = adjncy[j];if (where[k] == me && !touched[k]) {cind[last++] = k;touched[k] = 1;}}}cptr[++ncmps] = first;/* printf("I found %d components, for this %d-way partition\n", ncmps, nparts); */if (ncmps > nparts) { /* There are more components than processors *//* First determine the max allowed load imbalance */tvwgt = idxsum(nparts, pwgts);for (i=0; i<nparts; i++)maxpwgt[i] = ubfactor*tpwgts[i]*tvwgt;deltawgt = 5;for (i=0; i<ncmps; i++) {me = where[cind[cptr[i]]]; /* Get the domain of this component */if (npcmps[me] == 1)continue; /* Skip it because it is contigous *//*printf("Trying to move %d from %d\n", i, me); *//* Determine the weight of the block to be moved and abort if too high */for (cwgt=0, j=cptr[i]; j<cptr[i+1]; j++)cwgt += vwgt[cind[j]];if (cwgt > .30*pwgts[me])continue; /* Skip the component if it is over 30% of the weight *//* Determine the connectivity */idxset(nparts, 0, cpvec);for (j=cptr[i]; j<cptr[i+1]; j++) {ii = cind[j];for (jj=xadj[ii]; jj<xadj[ii+1]; jj++)cpvec[where[adjncy[jj]]] += adjwgt[jj];}cpvec[me] = 0;target = -1;for (j=0; j<nparts; j++) {if (cpvec[j] > 0 && (cwgt < deltawgt || pwgts[j] + cwgt < maxpwgt[j])) {if (target == -1 || cpvec[target] < cpvec[j])target = j;}}/* printf("\tMoving it to %d [%d]\n", target, cpvec[target]);*/if (target != -1) {/* Assign all the vertices of 'me' to 'target' and update data structures */INC_DEC(pwgts[target], pwgts[me], cwgt);npcmps[me]--;MoveGroup(ctrl, graph, nparts, target, i, cptr, cind);}}}idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nparts);idxwspacefree(ctrl, nvtxs);idxwspacefree(ctrl, nvtxs);idxwspacefree(ctrl, nvtxs);idxwspacefree(ctrl, nvtxs);idxwspacefree(ctrl, nvtxs);}/************************************************************************** This function moves a collection of vertices and updates their rinfo**************************************************************************/void MoveGroup(CtrlType *ctrl, GraphType *graph, int nparts, int to,int gid, idxtype *ptr, idxtype *ind){int i, ii, iii, j/* , jj */, k/* , l */, nvtxs, nbnd/* , myndegrees */;int from, me;idxtype *xadj, *adjncy, *adjwgt;idxtype *where, *bndptr, *bndind;EDegreeType *myedegrees;RInfoType *myrinfo;nvtxs = graph->nvtxs;xadj = graph->xadj;adjncy = graph->adjncy;adjwgt = graph->adjwgt;where = graph->where;bndptr = graph->bndptr;bndind = graph->bndind;nbnd = graph->nbnd;for (iii=ptr[gid]; iii<ptr[gid+1]; iii++) {i = ind[iii];from = where[i];myrinfo = graph->rinfo+i;if (myrinfo->edegrees == NULL) {myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;ctrl->wspace.cdegree += xadj[i+1]-xadj[i];myrinfo->ndegrees = 0;}myedegrees = myrinfo->edegrees;/* find the location of 'to' in myrinfo or create it if it is not there */for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == to)break;}if (k == myrinfo->ndegrees) {myedegrees[k].pid = to;myedegrees[k].ed = 0;myrinfo->ndegrees++;}graph->mincut -= myedegrees[k].ed-myrinfo->id;/* Update where, weight, and ID/ED information of the vertex you moved */where[i] = to;myrinfo->ed += myrinfo->id-myedegrees[k].ed;SWAP(myrinfo->id, myedegrees[k].ed, j);if (myedegrees[k].ed == 0)myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].pid = from;if (myrinfo->ed-myrinfo->id < 0 && bndptr[i] != -1)BNDDelete(nbnd, bndind, bndptr, i);/* Update the degrees of adjacent vertices */for (j=xadj[i]; j<xadj[i+1]; j++) {ii = adjncy[j];me = where[ii];myrinfo = graph->rinfo+ii;if (myrinfo->edegrees == NULL) {myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];}myedegrees = myrinfo->edegrees;ASSERT(CheckRInfo(myrinfo));if (me == from) {INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);if (myrinfo->ed-myrinfo->id >= 0 && bndptr[ii] == -1)BNDInsert(nbnd, bndind, bndptr, ii);}else if (me == to) {INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);if (myrinfo->ed-myrinfo->id < 0 && bndptr[ii] != -1)BNDDelete(nbnd, bndind, bndptr, ii);}/* Remove contribution from the .ed of 'from' */if (me != from) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == from) {if (myedegrees[k].ed == adjwgt[j])myedegrees[k] = myedegrees[--myrinfo->ndegrees];elsemyedegrees[k].ed -= adjwgt[j];break;}}}/* Add contribution to the .ed of 'to' */if (me != to) {for (k=0; k<myrinfo->ndegrees; k++) {if (myedegrees[k].pid == to) {myedegrees[k].ed += adjwgt[j];break;}}if (k == myrinfo->ndegrees) {myedegrees[myrinfo->ndegrees].pid = to;myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];}}ASSERT(CheckRInfo(myrinfo));}ASSERT(CheckRInfo(graph->rinfo+i));}graph->nbnd = nbnd;}