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3543 7268 d 4 h maechler /branches/Matrix-for-R-2.3.x/ branching an "old-R" compatible version of Matrix  
/branches/Matrix-for-R-2.3.x
3477 7278 d 0 h bates /trunk/Matrix/ Add Cholesky generic and method for dsCMatrix. Use CHOLMOD for chol().  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
3427 7283 d 7 h maechler /trunk/Matrix/ export zapsmall(); define as.numeric and as.logical methods (not yet finished); fix printing "U" diagonal triangular sparse  
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
3348 7301 d 12 h maechler /trunk/Matrix/R/ cleanup  
/trunk/Matrix/R/AllGeneric.R
3220 7354 d 5 h bates /trunk/Matrix/R/ No longer create a generic for qqmath  
/trunk/Matrix/R/AllGeneric.R
3180 7366 d 1 h bates /trunk/Matrix/ Add isNested and for an identity permutation for nested grouping factors  
/trunk/Matrix/ChangeLog
/trunk/Matrix/INDEX
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
3166 7371 d 2 h bates /trunk/Matrix/R/ Add a generic for qqmath (maybe not a good idea)  
/trunk/Matrix/R/AllGeneric.R
3145 7376 d 3 h bates /trunk/Matrix/ lowerTriMatrix to tril, upperTriMatrix to triu, added band extractor  
/trunk/Matrix/man/band.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Csparse.R
3134 7377 d 22 h bates /trunk/Matrix/ Generics lowerTriMatrix and upperTriMatrix and C function Csparse_band  
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/init.c
3080 7404 d 7 h bates /trunk/Matrix/ Remove postVar generic and methods  
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
3054 7414 d 21 h bates /trunk/Matrix/ Added qqmath method for ranef.lmer and postVar for ranef methods  
/trunk/Matrix/ChangeLog
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/TODO
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
3034 7424 d 1 h maechler /trunk/Matrix/ coercions from dgC to triangular (dtC) and symmetric (dsC), etc  
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/tests/simple.R
2348 7447 d 10 h maechler /trunk/Matrix/ lmer(): dropped non-sensical 'x' and 'y' arguments  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/src/lmer.c
2212 7495 d 21 h bates /trunk/Matrix/ Munging the data frame  
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/man/lmer.Rd
/trunk/Matrix/src/lmer.c
2120 7510 d 22 h maechler /trunk/Matrix/R/ isSymmetric() generic must match isSymmetric in R-devel  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/sparseMatrix.R
2068 7532 d 7 h maechler /trunk/Matrix/R/ Brian's version of 2-arg tcrossprod()  
/trunk/Matrix/R/AllGeneric.R
2059 7535 d 0 h maechler /trunk/Matrix/ make tcrossprod() use 2 arguments (x, y=NULL)  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/lgCMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/tcrossprod.Rd
/trunk/Matrix/tests/dtpMatrix.R
1906 7598 d 1 h maechler /trunk/Matrix/R/ isSymmetric() & simulate() updates; sparse subsetting  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/R/zzz.R
1857 7607 d 12 h maechler /trunk/Matrix/ some "Summary" methods; some "Compare" group methods; logical dense matrices  
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgeMatrix.R
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsyMatrix-class.Rd
/trunk/Matrix/man/ltrMatrix-class.Rd
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dpoMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/unused-classes.Rd
1844 7615 d 11 h maechler /trunk/Matrix/R/ move setGeneric to AllGeneric  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/dgeMatrix.R

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