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Rev Age Author Path Log message Diff
3771 7256 d 14 h bates /branches/Matrix-for-R-2.3.x/ Version 0.995-18 fixing problem with lmer(resp ~ 1|grp,  
3543 7267 d 18 h maechler /branches/Matrix-for-R-2.3.x/ branching an "old-R" compatible version of Matrix  
3445 7280 d 18 h bates /trunk/Matrix/  
3403 7288 d 17 h bates /trunk/Matrix/ Generalize conversions  
3356 7300 d 11 h bates /trunk/Matrix/  
3180 7365 d 14 h bates /trunk/Matrix/ Add isNested and for an identity permutation for nested grouping factors  
3153 7372 d 23 h bates /trunk/Matrix/ Initial denom_df attempt  
3145 7375 d 17 h bates /trunk/Matrix/ lowerTriMatrix to tril, upperTriMatrix to triu, added band extractor  
3093 7397 d 16 h bates /trunk/Matrix/ Extend example and add references for pedigree-class  
3082 7403 d 20 h bates /trunk/Matrix/ document qqmath method for ranef.lmer objects  
3054 7414 d 10 h bates /trunk/Matrix/ Added qqmath method for ranef.lmer and postVar for ranef methods  
3022 7432 d 23 h bates /trunk/Matrix/ modifying return value of ranef method and adding residuals method  
2364 7437 d 14 h bates /trunk/Matrix/ Fix dpotrf call for BLAS under Mac OS X  
2355 7440 d 21 h bates /trunk/Matrix/ Update documentation to new lmer class structure  
2304 7461 d 12 h bates /trunk/Matrix/ Used cholmod_vertcat and cholmod_horzcat for cbind2 and rbind2 in the dsparseMatrix virtual class  
2259 7488 d 13 h bates /trunk/Matrix/ Fix trivial memory leaks  
2199 7497 d 15 h bates /trunk/Matrix/ modifications to lmer and related classes  
2194 7499 d 11 h bates /trunk/Matrix/ Move glmer reweighting to internal_update_ZXy; rearrange the deck chairs  
2146 7505 d 14 h bates /trunk/Matrix/ Fix due to Peter Dalgaard for segfault with multiple non-nested grouping factors; Version 0.99-5  
1876 7602 d 9 h bates /trunk/Matrix/ Modifications to mer2  
1836 7615 d 13 h bates /trunk/Matrix/ crossprod and tcrossprod for Tsparse  
1792 7629 d 9 h bates /trunk/Matrix/ Add "start" argument to lmer  
1775 7635 d 20 h bates /trunk/Matrix/ Update  
1767 7638 d 11 h bates /trunk/Matrix/ clean up conversion of graphNEL to sparseMatrix  
1736 7647 d 13 h bates /trunk/Matrix/ Release 0.98-5  
1726 7649 d 16 h bates /trunk/Matrix/ Release 0.98-4  
1710 7657 d 19 h bates /trunk/Matrix/ update  
1696 7658 d 19 h bates /trunk/Matrix/ Harwell-Boeing and MatrixMarket formats  
1679 7669 d 11 h bates /trunk/Matrix/ Version 0.98-1  
1633 7692 d 19 h bates /trunk/Matrix/ Updates to man pages  
1612 7701 d 7 h bates /trunk/Matrix/ More work on MCMC (still incomplete)  
1610 7702 d 11 h bates /trunk/Matrix/ Adding MCMC capability (currently incomplete)  
1609 7702 d 19 h bates /trunk/Matrix/ Further development on AGQ and MCMC for glmm models  
1598 7707 d 19 h bates /trunk/Matrix/ Release 0.96-3  
1587 7717 d 17 h bates /trunk/Matrix/ Prepare for release 0.96-1  
1583 7718 d 11 h bates /trunk/Matrix/ Moving lmer to the Matrix package  
1473 7748 d 9 h bates /trunk/Matrix/ More logical sparse matrix methods  
1467 7749 d 9 h bates /trunk/Matrix/ Getting ready for a release  
1381 7769 d 20 h bates /trunk/Matrix/ Release 0.95-6  
1315 7790 d 20 h bates /trunk/Matrix/ Added dgRMatrix methods and documentation