R-packages – /branches/Matrix-for-R-2.3.x/Done

Rev 3543 – branching an "old-R" compatible version of Matrix

maechler — Sat, 02 Sep 2006 16:36:14 +0000

maechler – 1 file(s) modified
branching an "old-R" compatible version of Matrix

+ /branches/Matrix-for-R-2.3.x (copied from /trunk/Matrix@3542)

Rev 3340 – many method cleanups; notably some "dgC" -> "Csparse" generaliztations

maechler — Sat, 22 Jul 2006 17:59:53 +0000

maechler – 41 file(s) modified
many method cleanups; notably some "dgC" -> "Csparse" generaliztations

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/band.Rd
~ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
+ /trunk/Matrix/man/replValue-class.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/diagMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/pedigree.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/tests/bind.R
~ /trunk/Matrix/tests/bind.Rout.save
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 3338 – miscellaneous mostly related to sparse indexing

maechler — Fri, 21 Jul 2006 06:47:06 +0000

maechler – 17 file(s) modified
miscellaneous mostly related to sparse indexing

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/dgRMatrix-class.Rd
~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgRMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/TODO

Rev 3218 – implemented all 4 of {rowSums(), ... colMeans()}

maechler — Thu, 08 Jun 2006 09:30:21 +0000

maechler – 19 file(s) modified
implemented all 4 of {rowSums(), ... colMeans()}

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/denseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/tests/base-matrix-fun.R
~ /trunk/Matrix/TODO

Rev 2362 – put "mm" and "y" datasets into list "KNex" and change ...

maechler — Wed, 15 Mar 2006 17:43:34 +0000

maechler – 20 file(s) modified
put "mm" and "y" datasets into list "KNex" and change the docu, examples, tests, and one vignette accordingly;
ready for release of 0.995-6

~ /trunk/Matrix/ChangeLog
+ /trunk/Matrix/data/KNex.rda
x /trunk/Matrix/data/mm.rda
x /trunk/Matrix/data/y.rda
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/Done
~ /trunk/Matrix/inst/doc/Comparisons.Rnw
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/externalFormats.Rd
+ /trunk/Matrix/man/KNex.Rd (copied from /trunk/Matrix/man/mm.Rd@2360)
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
x /trunk/Matrix/man/mm.Rd
x /trunk/Matrix/man/y.Rd
~ /trunk/Matrix/tests/base-matrix-fun.R
~ /trunk/Matrix/tests/dg_Matrix.R
+ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/mm-redo.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 2357 – sparse: "[<-" and better arithmetic; other tweaks

maechler — Mon, 13 Mar 2006 14:07:58 +0000

maechler – 26 file(s) modified
sparse: "[<-" and better arithmetic; other tweaks

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsyMatrix-class.Rd
~ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/TODO

Rev 2355 – Update documentation to new lmer class structure

bates — Mon, 13 Mar 2006 13:05:33 +0000

bates – 4 file(s) modified
Update documentation to new lmer class structure

~ /trunk/Matrix/Done
~ /trunk/Matrix/INDEX
~ /trunk/Matrix/man/lmer-class.Rd
~ /trunk/Matrix/TODO

Rev 2123 – "diagonalMatrix" class and subclasses with a few methods; very basic ...

maechler — Tue, 03 Jan 2006 16:42:31 +0000

maechler – 15 file(s) modified
"diagonalMatrix" class and subclasses with a few methods; very basic "ltTMatrix" methods

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/Done
+ /trunk/Matrix/man/ddiMatrix-class.Rd
+ /trunk/Matrix/man/Diagonal.Rd
+ /trunk/Matrix/man/diagonalMatrix-class.Rd
+ /trunk/Matrix/man/ldiMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgeMatrix.R
+ /trunk/Matrix/R/diagMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
+ /trunk/Matrix/R/ltTMatrix.R
~ /trunk/Matrix/TODO

Rev 1909 – more examples; update

maechler — Fri, 07 Oct 2005 20:18:29 +0000

maechler – 7 file(s) modified
more examples; update

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/Cholesky-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/tcrossprod.Rd
~ /trunk/Matrix/TODO

Rev 1865 – move "factors" slot to "Matrix"

maechler — Wed, 28 Sep 2005 19:31:36 +0000

maechler – 8 file(s) modified
move "factors" slot to "Matrix"

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/denseMatrix-class.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/symmetricMatrix-class.Rd
~ /trunk/Matrix/man/triangularMatrix-class.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/TODO

Rev 1857 – some "Summary" methods; some "Compare" group methods; logical dense matrices

maechler — Wed, 28 Sep 2005 08:56:42 +0000

maechler – 37 file(s) modified
some "Summary" methods; some "Compare" group methods; logical dense matrices

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
+ /trunk/Matrix/man/ldenseMatrix-class.Rd
+ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
+ /trunk/Matrix/man/lsyMatrix-class.Rd
+ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/unused-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
+ /trunk/Matrix/R/ldenseMatrix.R
+ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1843 – update TODOs

maechler — Tue, 20 Sep 2005 10:14:57 +0000

maechler – 2 file(s) modified
update TODOs

~ /trunk/Matrix/Done
~ /trunk/Matrix/TODO

Rev 1772 –

bates — Tue, 30 Aug 2005 14:37:09 +0000

bates – 2 file(s) modified

~ /trunk/Matrix/Done
~ /trunk/Matrix/TODO

Rev 1759 – better explain diag="U" for dtpMatrix

maechler — Fri, 26 Aug 2005 17:23:49 +0000

maechler – 3 file(s) modified
better explain diag="U" for dtpMatrix

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/TODO

Rev 1313 – export csc_tcrossprod - and add examples & test for tcrossprod()

maechler — Sat, 26 Mar 2005 11:16:05 +0000

maechler – 6 file(s) modified
export csc_tcrossprod - and add examples & test for tcrossprod()

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/tcrossprod.Rd
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/dgCMatrix.R
~ /trunk/Matrix/TODO

Rev 1126 – Release 0.95-1

bates — Fri, 18 Feb 2005 19:24:43 +0000

bates – 13 file(s) modified
Release 0.95-1

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/Done
~ /trunk/Matrix/Doxyfile
~ /trunk/Matrix/INDEX
x /trunk/Matrix/man/corFactor.Rd
x /trunk/Matrix/man/corMatrix.Rd
~ /trunk/Matrix/man/expm.Rd
x /trunk/Matrix/man/matrixGets.Rd
x /trunk/Matrix/man/pdFactor.Rd
x /trunk/Matrix/man/pdMatrix.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/tests/matr-exp.R

Rev 1065 – more "Done"

maechler — Thu, 10 Feb 2005 14:32:59 +0000

maechler – 4 file(s) modified
more "Done"

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/bCrosstab.Rd
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/TODO

Rev 1060 – add @Dimnames (-> new "mm")

maechler — Thu, 10 Feb 2005 13:50:27 +0000

maechler – 18 file(s) modified
add @Dimnames (-> new "mm")

~ /trunk/Matrix/data/mm.rda
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/Cholesky-class.Rd
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/dgBCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/dpoMatrix.Rout.save
~ /trunk/Matrix/tests/matr-exp.R
~ /trunk/Matrix/tests/mm-redo.R
~ /trunk/Matrix/tests/validObj.R
~ /trunk/Matrix/TODO

Rev 1054 – rearranging utility functions in the C code

bates — Thu, 10 Feb 2005 08:15:12 +0000

bates – 11 file(s) modified
rearranging utility functions in the C code

~ /trunk/Matrix/Done
~ /trunk/Matrix/R/dgBCMatrix.R
~ /trunk/Matrix/src/bCrosstab.c
~ /trunk/Matrix/src/dgBCMatrix.c
~ /trunk/Matrix/src/dgBCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/lmer.h
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h
~ /trunk/Matrix/TODO

Rev 1034 – Fixes from the TODO list

bates — Mon, 07 Feb 2005 10:58:27 +0000

bates – 2 file(s) modified
Fixes from the TODO list

~ /trunk/Matrix/Done
~ /trunk/Matrix/TODO

Rev 1033 – Fixes from the TODO list

bates — Mon, 07 Feb 2005 10:56:34 +0000

bates – 3 file(s) modified
Fixes from the TODO list

~ /trunk/Matrix/Done
~ /trunk/Matrix/INDEX
~ /trunk/Matrix/TODO

Rev 1010 – update

maechler — Fri, 04 Feb 2005 23:44:00 +0000

maechler – 2 file(s) modified
update

+ /trunk/Matrix/Done
~ /trunk/Matrix/TODO