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3543 7267 d 18 h maechler /branches/Matrix-for-R-2.3.x/ branching an "old-R" compatible version of Matrix  
/branches/Matrix-for-R-2.3.x
3340 7309 d 16 h maechler /trunk/Matrix/ many method cleanups; notably some "dgC" -> "Csparse" generaliztations  
/trunk/Matrix/man/replValue-class.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/pedigree.R
/trunk/Matrix/TODO
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/Subassign-methods.Rd
/trunk/Matrix/man/band.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/tests/bind.R
/trunk/Matrix/tests/bind.Rout.save
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
/trunk/Matrix/tests/matprod.R
/trunk/Matrix/tests/simple.R
3338 7311 d 4 h maechler /trunk/Matrix/ miscellaneous mostly related to sparse indexing  
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/Done
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgRMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgRMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
3218 7354 d 1 h maechler /trunk/Matrix/ implemented all 4 of {rowSums(), ... colMeans()}  
/trunk/Matrix/ChangeLog
/trunk/Matrix/Done
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/denseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
/trunk/Matrix/tests/base-matrix-fun.R
2362 7438 d 17 h maechler /trunk/Matrix/ put "mm" and "y" datasets into list "KNex" and change the docu, examples, tests, and one vignette accordingly;
ready for release of 0.995-6		  
/trunk/Matrix/data/KNex.rda
/trunk/Matrix/man/KNex.Rd
/trunk/Matrix/tests/dpoMatrix.Rout.save
/trunk/Matrix/data/mm.rda
/trunk/Matrix/data/y.rda
/trunk/Matrix/man/mm.Rd
/trunk/Matrix/man/y.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/Done
/trunk/Matrix/TODO
/trunk/Matrix/inst/doc/Comparisons.Rnw
/trunk/Matrix/man/dCholCMatrix-class.Rd
/trunk/Matrix/man/externalFormats.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/tests/base-matrix-fun.R
/trunk/Matrix/tests/dg_Matrix.R
/trunk/Matrix/tests/matprod.R
/trunk/Matrix/tests/mm-redo.R
/trunk/Matrix/tests/simple.R
2357 7440 d 20 h maechler /trunk/Matrix/ sparse: "[<-" and better arithmetic; other tweaks  
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/Done
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/Matrix.Rd
/trunk/Matrix/man/Subassign-methods.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsyMatrix-class.Rd
/trunk/Matrix/man/ltrMatrix-class.Rd
/trunk/Matrix/tests/Class+Meth.R
/trunk/Matrix/tests/group-methods.R
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
2355 7440 d 21 h bates /trunk/Matrix/ Update documentation to new lmer class structure  
/trunk/Matrix/Done
/trunk/Matrix/INDEX
/trunk/Matrix/TODO
/trunk/Matrix/man/lmer-class.Rd
2123 7509 d 18 h maechler /trunk/Matrix/ "diagonalMatrix" class and subclasses with a few methods; very basic "ltTMatrix" methods  
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/ltTMatrix.R
/trunk/Matrix/man/Diagonal.Rd
/trunk/Matrix/man/ddiMatrix-class.Rd
/trunk/Matrix/man/diagonalMatrix-class.Rd
/trunk/Matrix/man/ldiMatrix-class.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/lsparseMatrix-classes.Rd
1909 7597 d 14 h maechler /trunk/Matrix/ more examples; update  
/trunk/Matrix/ChangeLog
/trunk/Matrix/Done
/trunk/Matrix/TODO
/trunk/Matrix/man/Cholesky-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/tcrossprod.Rd
1865 7606 d 15 h maechler /trunk/Matrix/ move "factors" slot to "Matrix"  
/trunk/Matrix/Done
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix.Rd
/trunk/Matrix/man/denseMatrix-class.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/man/symmetricMatrix-class.Rd
/trunk/Matrix/man/triangularMatrix-class.Rd
1857 7607 d 2 h maechler /trunk/Matrix/ some "Summary" methods; some "Compare" group methods; logical dense matrices  
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgeMatrix.R
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsyMatrix-class.Rd
/trunk/Matrix/man/ltrMatrix-class.Rd
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dpoMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dsparseMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/unused-classes.Rd
1843 7615 d 0 h maechler /trunk/Matrix/ update TODOs  
/trunk/Matrix/Done
/trunk/Matrix/TODO
1772 7635 d 20 h bates /trunk/Matrix/  
/trunk/Matrix/Done
/trunk/Matrix/TODO
1759 7639 d 17 h maechler /trunk/Matrix/ better explain diag="U" for dtpMatrix  
/trunk/Matrix/Done
/trunk/Matrix/TODO
/trunk/Matrix/man/dtpMatrix-class.Rd
1313 7792 d 23 h maechler /trunk/Matrix/ export csc_tcrossprod - and add examples & test for tcrossprod()  
/trunk/Matrix/Done
/trunk/Matrix/TODO
/trunk/Matrix/man/tcrossprod.Rd
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dgCMatrix.R
1126 7828 d 15 h bates /trunk/Matrix/ Release 0.95-1  
/trunk/Matrix/man/corFactor.Rd
/trunk/Matrix/man/corMatrix.Rd
/trunk/Matrix/man/matrixGets.Rd
/trunk/Matrix/man/pdFactor.Rd
/trunk/Matrix/man/pdMatrix.Rd
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/Done
/trunk/Matrix/Doxyfile
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/man/expm.Rd
/trunk/Matrix/tests/matr-exp.R
1065 7836 d 20 h maechler /trunk/Matrix/ more "Done"  
/trunk/Matrix/Done
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/bCrosstab.Rd
1060 7836 d 21 h maechler /trunk/Matrix/ add @Dimnames (-> new "mm")  
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/data/mm.rda
/trunk/Matrix/man/Cholesky-class.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dCholCMatrix-class.Rd
/trunk/Matrix/man/dgBCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/tests/dpoMatrix.Rout.save
/trunk/Matrix/tests/matr-exp.R
/trunk/Matrix/tests/mm-redo.R
/trunk/Matrix/tests/validObj.R
1054 7837 d 2 h bates /trunk/Matrix/ rearranging utility functions in the C code  
/trunk/Matrix/Done
/trunk/Matrix/R/dgBCMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/bCrosstab.c
/trunk/Matrix/src/dgBCMatrix.c
/trunk/Matrix/src/dgBCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
1034 7839 d 23 h bates /trunk/Matrix/ Fixes from the TODO list  
/trunk/Matrix/Done
/trunk/Matrix/TODO

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