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4560 6961 d 7 h bates /branches/Matrix-APIchange/src/ Replace most calls to Calloc by Alloca  
/branches/Matrix-APIchange/src/HBMM.c
/branches/Matrix-APIchange/src/Mutils.c
/branches/Matrix-APIchange/src/dgTMatrix.c
/branches/Matrix-APIchange/src/dgeMatrix.c
/branches/Matrix-APIchange/src/dspMatrix.c
/branches/Matrix-APIchange/src/dsyMatrix.c
/branches/Matrix-APIchange/src/dtCMatrix.c
/branches/Matrix-APIchange/src/factorizations.c
/branches/Matrix-APIchange/src/sparseQR.c
4529 6966 d 8 h bates /branches/Matrix-APIchange/ Creating a branch for the API changes from the 0.99875 series to the 0.999375 series  
/branches/Matrix-APIchange
4418 6993 d 5 h bates /trunk/Matrix/src/ Remove warnings after change to const char* CHAR  
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/HBMM.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dpoMatrix.h
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dppMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dspMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
3520 7271 d 23 h bates /trunk/Matrix/ Promotion of %*% and solve to RHS of ddenseMatrix  
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtpMatrix-class.Rd
/trunk/Matrix/man/dtrMatrix-class.Rd
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dspMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtpMatrix.h
/trunk/Matrix/src/dtrMatrix.c
3501 7276 d 1 h maechler /trunk/Matrix/ use setAs("ddenseMatrix", "dgeMatrix", *) instead of older specific ones  
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/ddiMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsyMatrix-class.Rd
/trunk/Matrix/man/dtpMatrix-class.Rd
/trunk/Matrix/man/dtrMatrix-class.Rd
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
3027 7431 d 6 h bates /trunk/Matrix/ Propagate DimNames in dsyMatrix_as_dspMatrix  
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/lmer.R
/trunk/Matrix/TODO
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/tests/lmer.R
2254 7490 d 6 h maechler /trunk/Matrix/ make*_(triangular|symmetric) : now for ldense* as well  
/trunk/Matrix/ChangeLog
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/dtrMatrix.h
/trunk/Matrix/src/factorizations.c
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ldense.c
/trunk/Matrix/src/ldense.h
2200 7498 d 1 h bates /trunk/Matrix/ Removing rcond slot from Matrix objects  
/trunk/Matrix/tests/dpoMatrix.Rout.save
/trunk/Matrix/src/Syms.h
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dpoMatrix.R
/trunk/Matrix/tests/dtpMatrix.R
2197 7498 d 22 h maechler /trunk/Matrix/src/ new dMatrix_validate and dense_nonpacked_validate  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
1864 7607 d 2 h maechler /trunk/Matrix/src/ packed_to_full_(double|int) and full_to_packed_*  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/ldense.c
1862 7607 d 9 h maechler /trunk/Matrix/src/ use uplo_P() and diag_P() macros instead of *_value() functions  
/trunk/Matrix/src/HBMM.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dppMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/lgCMatrix.c
/trunk/Matrix/src/lsCMatrix.c
/trunk/Matrix/src/ltCMatrix.c
1781 7634 d 4 h maechler /trunk/Matrix/ add triangularMatrix_validate and symmetric* to C code and make (re!)use of it - not quite everywhere?  
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dspMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dpoMatrix.Rout.save
1273 7804 d 21 h bates /trunk/Matrix/ Adding many methods for the dsyMatrix class  
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
1261 7806 d 17 h bates /trunk/Matrix/ Add BunchKaufman factorization  
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/man/Cholesky-class.Rd
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
/trunk/Matrix/src/factorizations.c
/trunk/Matrix/src/factorizations.h
/trunk/Matrix/src/init.c
1258 7809 d 4 h maechler /trunk/Matrix/ more %*% methods; some dimnames in C (untested); checks extended  
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dtpMatrix-class.Rd
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtpMatrix.c
/trunk/Matrix/src/dtpMatrix.h
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/tests/dpoMatrix.Rout.save
/trunk/Matrix/tests/dtpMatrix.R
/trunk/Matrix/tests/matprod.R
/trunk/Matrix/tests/validObj.R
1203 7816 d 16 h bates /trunk/Matrix/src/ Clean up *_validate functions  
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtrMatrix.c
1190 7819 d 4 h bates /trunk/Matrix/ Internationalization and localization  
/trunk/Matrix/inst/po
/trunk/Matrix/inst/po/LL
/trunk/Matrix/inst/po/LL/LC_MESSAGES
/trunk/Matrix/inst/po/LL/LC_MESSAGES/Matrix.mo
/trunk/Matrix/inst/po/LL/LC_MESSAGES/R-Matrix.mo
/trunk/Matrix/po
/trunk/Matrix/po/Matrix.pot
/trunk/Matrix/po/R-Matrix.pot
/trunk/Matrix/src/LU.c
/trunk/Matrix/src/LU.h
/trunk/Matrix/src/cblas.h
/trunk/Matrix/src/flame.c
/trunk/Matrix/src/flame.h
/trunk/Matrix/src/ldl.c
/trunk/Matrix/src/ldl.h
/trunk/Matrix/ChangeLog
/trunk/Matrix/Doxyfile
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/bCrosstab.c
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgBCMatrix.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/factorizations.c
/trunk/Matrix/src/factorizations.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/sscCrosstab.c
/trunk/Matrix/src/ssclme.c
/trunk/Matrix/src/triplet_to_col.c
/trunk/Matrix/src/triplet_to_col.h
1044 7839 d 13 h maechler /trunk/Matrix/src/ use mkString(); "uplo" and "diag" must be uppercase  
/trunk/Matrix/src/LU.c
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/sscCrosstab.c
978 7845 d 7 h bates /trunk/Matrix/src/ Renaming and reorganizing classes  
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dgTMatrix_to_dgCMatrix.c
/trunk/Matrix/src/dgTMatrix_to_dgCMatrix.h
/trunk/Matrix/src/dgeMatrix.c
/trunk/Matrix/src/dgeMatrix.h
/trunk/Matrix/src/dpoMatrix.c
/trunk/Matrix/src/dpoMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
/trunk/Matrix/src/dsyMatrix.c
/trunk/Matrix/src/dsyMatrix.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/dtrMatrix.c
/trunk/Matrix/src/dtrMatrix.h
/trunk/Matrix/src/cscMatrix.c
/trunk/Matrix/src/cscMatrix.h
/trunk/Matrix/src/geMatrix.c
/trunk/Matrix/src/geMatrix.h
/trunk/Matrix/src/poMatrix.c
/trunk/Matrix/src/poMatrix.h
/trunk/Matrix/src/sscMatrix.c
/trunk/Matrix/src/sscMatrix.h
/trunk/Matrix/src/syMatrix.c
/trunk/Matrix/src/syMatrix.h
/trunk/Matrix/src/trMatrix.c
/trunk/Matrix/src/trMatrix.h
/trunk/Matrix/src/triplet.c
/trunk/Matrix/src/triplet.h
/trunk/Matrix/src/triplet_to_col.c
/trunk/Matrix/src/triplet_to_col.h
/trunk/Matrix/src/tscMatrix.c
/trunk/Matrix/src/tscMatrix.h
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/SOURCES_C.mkf
977 7845 d 7 h bates /trunk/Matrix/src/ Renaming and reorganizing classes  
/trunk/Matrix/src/LU.c
/trunk/Matrix/src/LU.h
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/bCrosstab.c
/trunk/Matrix/src/bCrosstab.h
/trunk/Matrix/src/cscBlocked.c
/trunk/Matrix/src/cscBlocked.h
/trunk/Matrix/src/cscMatrix.c
/trunk/Matrix/src/cscMatrix.h
/trunk/Matrix/src/geMatrix.c
/trunk/Matrix/src/geMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
/trunk/Matrix/src/poMatrix.c
/trunk/Matrix/src/poMatrix.h
/trunk/Matrix/src/sscChol.h
/trunk/Matrix/src/sscCrosstab.c
/trunk/Matrix/src/sscCrosstab.h
/trunk/Matrix/src/sscMatrix.c
/trunk/Matrix/src/sscMatrix.h
/trunk/Matrix/src/syMatrix.c
/trunk/Matrix/src/syMatrix.h
/trunk/Matrix/src/trMatrix.c
/trunk/Matrix/src/trMatrix.h
/trunk/Matrix/src/triplet.c
/trunk/Matrix/src/triplet.h
/trunk/Matrix/src/triplet_to_col.c
/trunk/Matrix/src/triplet_to_col.h
/trunk/Matrix/src/tscMatrix.c
/trunk/Matrix/src/tscMatrix.h

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