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#include "dppMatrix.h"SEXP dppMatrix_validate(SEXP obj){/* int i, n = INTEGER(GET_SLOT(obj, Matrix_DimSym))[0]; *//* double *x = REAL(GET_SLOT(obj, Matrix_xSym)); *//* quick but nondefinitive check on positive definiteness *//* for (i = 0; i < n; i++) *//* if (x[i * np1] < 0) *//* return mkString(_("dppMatrix is not positive definite")); */return dspMatrix_validate(obj);}SEXP dppMatrix_chol(SEXP x){SEXP val = get_factors(x, "pCholesky"),dimP = GET_SLOT(x, Matrix_DimSym),uploP = GET_SLOT(x, Matrix_uploSym);const char *uplo = CHAR(STRING_ELT(uploP, 0));int *dims = INTEGER(dimP), info;if (val != R_NilValue) return val;dims = INTEGER(dimP);val = PROTECT(NEW_OBJECT(MAKE_CLASS("pCholesky")));SET_SLOT(val, Matrix_uploSym, duplicate(uploP));SET_SLOT(val, Matrix_diagSym, mkString("N"));SET_SLOT(val, Matrix_DimSym, duplicate(dimP));SET_SLOT(val, Matrix_xSym, duplicate(GET_SLOT(x, Matrix_xSym)));F77_CALL(dpptrf)(uplo, dims, REAL(GET_SLOT(val, Matrix_xSym)), &info);if (info) {if(info > 0) /* e.g. x singular */error(_("the leading minor of order %d is not positive definite"),info);else /* should never happen! */error(_("Lapack routine %s returned error code %d"), "dpptrf", info);}UNPROTECT(1);return set_factors(x, val, "pCholesky");}SEXP dppMatrix_rcond(SEXP obj, SEXP type){SEXP Chol = dppMatrix_chol(obj);char typnm[] = {'O', '\0'}; /* always use the one norm */int *dims = INTEGER(GET_SLOT(Chol, Matrix_DimSym)), info;double anorm = get_norm_sp(obj, typnm), rcond;F77_CALL(dppcon)(uplo_P(Chol), dims,REAL(GET_SLOT(Chol, Matrix_xSym)), &anorm, &rcond,(double *) R_alloc(3*dims[0], sizeof(double)),(int *) R_alloc(dims[0], sizeof(int)), &info);return ScalarReal(rcond);}SEXP dppMatrix_solve(SEXP x){SEXP Chol = dppMatrix_chol(x);SEXP val = PROTECT(NEW_OBJECT(MAKE_CLASS("dppMatrix")));int *dims = INTEGER(GET_SLOT(x, Matrix_DimSym)), info;SET_SLOT(val, Matrix_uploSym, duplicate(GET_SLOT(Chol, Matrix_uploSym)));SET_SLOT(val, Matrix_xSym, duplicate(GET_SLOT(Chol, Matrix_xSym)));SET_SLOT(val, Matrix_DimSym, duplicate(GET_SLOT(Chol, Matrix_DimSym)));F77_CALL(dpptri)(uplo_P(val), dims,REAL(GET_SLOT(val, Matrix_xSym)), &info);UNPROTECT(1);return val;}SEXP dppMatrix_matrix_solve(SEXP a, SEXP b){SEXP val = PROTECT(dup_mMatrix_as_dgeMatrix(b));SEXP Chol = dppMatrix_chol(a);int *adims = INTEGER(GET_SLOT(a, Matrix_DimSym)),*bdims = INTEGER(GET_SLOT(val, Matrix_DimSym));int n = bdims[0], nrhs = bdims[1], info;if (*adims != *bdims || bdims[1] < 1 || *adims < 1)error(_("Dimensions of system to be solved are inconsistent"));F77_CALL(dpptrs)(uplo_P(Chol), &n, &nrhs,REAL(GET_SLOT(Chol, Matrix_xSym)),REAL(GET_SLOT(val, Matrix_xSym)), &n, &info);UNPROTECT(1);return val;}