| Rev |
Age |
Author |
Path |
Log message |
Diff |
Changes |
| 4529 |
6966 d 5 h |
bates |
/branches/Matrix-APIchange/ |
Creating a branch for the API changes from the 0.99875 series to the 0.999375 series |
|
/branches/Matrix-APIchange
|
| 4483 |
6978 d 2 h |
maechler |
/trunk/Matrix/ |
colSums, ... rowMeans for all Matrices; notably sparse ones via [diln]gCMatrix_colSums C code |
|
/trunk/Matrix/R/colSums.R
/trunk/Matrix/ChangeLog /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Rsparse.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dgTMatrix.R /trunk/Matrix/R/dgeMatrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/R/sparseVector.R /trunk/Matrix/TODO /trunk/Matrix/inst/test-tools.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/RsparseMatrix-class.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/colSums.Rd /trunk/Matrix/man/denseMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dgTMatrix-class.Rd /trunk/Matrix/src/dgCMatrix.c /trunk/Matrix/src/dgCMatrix.h /trunk/Matrix/src/init.c /trunk/Matrix/tests/simple.R
|
| 4032 |
7163 d 6 h |
maechler |
/trunk/Matrix/ |
any(), all() and "Compare"(<sparse>) - for release of 0.9975-7 |
|
/trunk/Matrix/man/all-methods.Rd
/trunk/Matrix/ChangeLog /trunk/Matrix/DESCRIPTION /trunk/Matrix/NAMESPACE /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/lMatrix.R /trunk/Matrix/R/ldenseMatrix.R /trunk/Matrix/R/lsparseMatrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/tests/Class+Meth.R /trunk/Matrix/tests/indexing.R /trunk/Matrix/tests/indexing.Rout.save /trunk/Matrix/tests/simple.R
|
| 3943 |
7207 d 7 h |
maechler |
/trunk/Matrix/ |
tcrossprod(<Csp>, <Csp>); dimnames for [t]crossprod; validity now ensures correct length(Dimnames[[j]]) |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/R/AllClass.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/src/Csparse.c /trunk/Matrix/src/chm_common.c /trunk/Matrix/src/chm_common.h /trunk/Matrix/src/dgCMatrix.c /trunk/Matrix/src/dgCMatrix.h /trunk/Matrix/src/dsCMatrix.c /trunk/Matrix/src/init.c /trunk/Matrix/src/lgCMatrix.c /trunk/Matrix/src/lgCMatrix.h /trunk/Matrix/tests/matprod.R /trunk/Matrix/tests/simple.R
|
| 3942 |
7208 d 0 h |
maechler |
/trunk/Matrix/ |
extend Csparse_Csparse_crossprod for tcrossprod (need test!); isSymmetric improved; misc. |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/Done /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/TODO /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/src/Csparse.c /trunk/Matrix/src/Csparse.h /trunk/Matrix/src/chm_common.c /trunk/Matrix/src/init.c
|
| 3940 |
7208 d 2 h |
bates |
/trunk/Matrix/ |
crossprod(<CsparseMatrix>,<CsparseMatrix>) added |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/DESCRIPTION /trunk/Matrix/R/Csparse.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/src/Csparse.c /trunk/Matrix/src/Csparse.h /trunk/Matrix/src/init.c /trunk/Matrix/tests/matprod.R
|
| 3755 |
7258 d 20 h |
maechler |
/trunk/Matrix/ |
new nMatrix and subclasses; lsparse change to have x slot; many consequences |
|
/trunk/Matrix/R/lMatrix.R /trunk/Matrix/R/ndenseMatrix.R /trunk/Matrix/R/ngCMatrix.R /trunk/Matrix/R/ngTMatrix.R /trunk/Matrix/R/nsCMatrix.R /trunk/Matrix/R/nsparseMatrix.R /trunk/Matrix/R/ntCMatrix.R /trunk/Matrix/R/ntTMatrix.R /trunk/Matrix/man/nMatrix-class.Rd /trunk/Matrix/man/ndenseMatrix-class.Rd /trunk/Matrix/man/ndiMatrix-class.Rd /trunk/Matrix/man/ngeMatrix-class.Rd /trunk/Matrix/man/nsparseMatrix-classes.Rd /trunk/Matrix/man/nsyMatrix-class.Rd /trunk/Matrix/man/ntrMatrix-class.Rd
/trunk/Matrix/ChangeLog /trunk/Matrix/DESCRIPTION /trunk/Matrix/NAMESPACE /trunk/Matrix/R/AllClass.R /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/dMatrix.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dsCMatrix.R /trunk/Matrix/R/dtCMatrix.R /trunk/Matrix/R/ldenseMatrix.R /trunk/Matrix/R/lgCMatrix.R /trunk/Matrix/R/lgTMatrix.R /trunk/Matrix/R/lsparseMatrix.R /trunk/Matrix/R/pMatrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/inst/doc/Intro2Matrix.Rnw /trunk/Matrix/inst/test-tools.R /trunk/Matrix/man/CHMfactor-class.Rd /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/man/band.Rd /trunk/Matrix/man/dMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dtCMatrix-class.Rd /trunk/Matrix/man/ldenseMatrix-class.Rd /trunk/Matrix/man/lgeMatrix-class.Rd /trunk/Matrix/man/lsparseMatrix-classes.Rd /trunk/Matrix/man/lsyMatrix-class.Rd /trunk/Matrix/man/pMatrix-class.Rd /trunk/Matrix/src/Csparse.c /trunk/Matrix/src/Csparse.h /trunk/Matrix/src/Mutils.h /trunk/Matrix/src/Tsparse.c /trunk/Matrix/src/chm_common.c /trunk/Matrix/src/chm_common.h /trunk/Matrix/src/dense.c /trunk/Matrix/src/dsCMatrix.c /trunk/Matrix/src/dsTMatrix.c /trunk/Matrix/src/dtTMatrix.c /trunk/Matrix/src/init.c /trunk/Matrix/src/ldense.c /trunk/Matrix/src/ldense.h /trunk/Matrix/tests/Class+Meth.R /trunk/Matrix/tests/matprod.R /trunk/Matrix/tests/simple.R
|
| 3534 |
7269 d 3 h |
maechler |
/trunk/Matrix/ |
miscellaneous tweaks; moved some method definitions higher up |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/DESCRIPTION /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/dMatrix.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dsparseMatrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/denseMatrix-class.Rd /trunk/Matrix/man/dsparseMatrix-class.Rd /trunk/Matrix/man/sparseMatrix-class.Rd
|
| 3520 |
7271 d 20 h |
bates |
/trunk/Matrix/ |
Promotion of %*% and solve to RHS of ddenseMatrix |
|
/trunk/Matrix/R/ddenseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dgeMatrix.R /trunk/Matrix/R/dspMatrix.R /trunk/Matrix/R/dsyMatrix.R /trunk/Matrix/R/dtpMatrix.R /trunk/Matrix/R/dtrMatrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/ddenseMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dgeMatrix-class.Rd /trunk/Matrix/man/dsyMatrix-class.Rd /trunk/Matrix/man/dtpMatrix-class.Rd /trunk/Matrix/man/dtrMatrix-class.Rd /trunk/Matrix/src/Mutils.h /trunk/Matrix/src/dgCMatrix.c /trunk/Matrix/src/dgeMatrix.c /trunk/Matrix/src/dgeMatrix.h /trunk/Matrix/src/dspMatrix.c /trunk/Matrix/src/dspMatrix.h /trunk/Matrix/src/dsyMatrix.c /trunk/Matrix/src/dsyMatrix.h /trunk/Matrix/src/dtpMatrix.c /trunk/Matrix/src/dtpMatrix.h /trunk/Matrix/src/dtrMatrix.c
|
| 3517 |
7272 d 4 h |
bates |
/trunk/Matrix/ |
Promote %*% methods to ddenseMatrix class |
|
/trunk/Matrix/R/Csparse.R /trunk/Matrix/R/ddenseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dsCMatrix.R /trunk/Matrix/R/dsparseMatrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/band.Rd /trunk/Matrix/man/ddenseMatrix-class.Rd /trunk/Matrix/man/dsCMatrix-class.Rd
|
| 3413 |
7286 d 0 h |
maechler |
/trunk/Matrix/man/ |
update methods list |
|
/trunk/Matrix/man/CsparseMatrix-class.Rd
|
| 3405 |
7286 d 23 h |
bates |
/trunk/Matrix/ |
Use CHOLMOD code for general methods at CsparseMatrix, TsparseMatrix, denseMatrix or matrix level when possible |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/man/CsparseMatrix-class.Rd
|
| 3403 |
7289 d 1 h |
bates |
/trunk/Matrix/ |
Generalize conversions |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/INDEX /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd
|
| 3340 |
7310 d 0 h |
maechler |
/trunk/Matrix/ |
many method cleanups; notably some "dgC" -> "Csparse" generaliztations |
|
/trunk/Matrix/man/replValue-class.Rd
/trunk/Matrix/ChangeLog /trunk/Matrix/Done /trunk/Matrix/NAMESPACE /trunk/Matrix/R/AllClass.R /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/dMatrix.R /trunk/Matrix/R/ddenseMatrix.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dgTMatrix.R /trunk/Matrix/R/dgeMatrix.R /trunk/Matrix/R/diagMatrix.R /trunk/Matrix/R/dsCMatrix.R /trunk/Matrix/R/dsparseMatrix.R /trunk/Matrix/R/dtCMatrix.R /trunk/Matrix/R/lmer.R /trunk/Matrix/R/lsCMatrix.R /trunk/Matrix/R/pedigree.R /trunk/Matrix/TODO /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/man/Subassign-methods.Rd /trunk/Matrix/man/band.Rd /trunk/Matrix/man/dMatrix-class.Rd /trunk/Matrix/man/ddenseMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dgTMatrix-class.Rd /trunk/Matrix/man/dgeMatrix-class.Rd /trunk/Matrix/man/dsCMatrix-class.Rd /trunk/Matrix/man/pMatrix-class.Rd /trunk/Matrix/src/chm_common.c /trunk/Matrix/tests/bind.R /trunk/Matrix/tests/bind.Rout.save /trunk/Matrix/tests/indexing.R /trunk/Matrix/tests/indexing.Rout.save /trunk/Matrix/tests/matprod.R /trunk/Matrix/tests/simple.R
|
| 3338 |
7311 d 11 h |
maechler |
/trunk/Matrix/ |
miscellaneous mostly related to sparse indexing |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/DESCRIPTION /trunk/Matrix/Done /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/dMatrix.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dgRMatrix.R /trunk/Matrix/R/dgTMatrix.R /trunk/Matrix/TODO /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/dMatrix-class.Rd /trunk/Matrix/man/dgRMatrix-class.Rd /trunk/Matrix/man/dgTMatrix-class.Rd
|
| 3218 |
7354 d 9 h |
maechler |
/trunk/Matrix/ |
implemented all 4 of {rowSums(), ... colMeans()} |
|
/trunk/Matrix/ChangeLog /trunk/Matrix/Done /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dgTMatrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/TODO /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/denseMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dgTMatrix-class.Rd /trunk/Matrix/man/sparseMatrix-class.Rd /trunk/Matrix/tests/base-matrix-fun.R
|
| 3175 |
7369 d 3 h |
maechler |
/trunk/Matrix/man/ |
start massive use of \linkS4class{.} |
|
/trunk/Matrix/man/CAex.Rd /trunk/Matrix/man/CHMfactor-class.Rd /trunk/Matrix/man/Cholesky-class.Rd /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/Diagonal.Rd /trunk/Matrix/man/Hilbert.Rd /trunk/Matrix/man/LU-class.Rd /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/man/Matrix.Rd /trunk/Matrix/man/RsparseMatrix-class.Rd /trunk/Matrix/man/Subassign-methods.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/VarCorr.Rd /trunk/Matrix/man/band.Rd /trunk/Matrix/man/compMatrix-class.Rd /trunk/Matrix/man/dCholCMatrix-class.Rd /trunk/Matrix/man/dMatrix-class.Rd /trunk/Matrix/man/ddenseMatrix-class.Rd /trunk/Matrix/man/ddiMatrix-class.Rd /trunk/Matrix/man/denseMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dgRMatrix-class.Rd /trunk/Matrix/man/dgTMatrix-class.Rd /trunk/Matrix/man/dgeMatrix-class.Rd /trunk/Matrix/man/diagonalMatrix-class.Rd /trunk/Matrix/man/dpoMatrix-class.Rd /trunk/Matrix/man/dsCMatrix-class.Rd /trunk/Matrix/man/dsRMatrix-class.Rd /trunk/Matrix/man/dsparseMatrix-class.Rd /trunk/Matrix/man/dsyMatrix-class.Rd /trunk/Matrix/man/dtCMatrix-class.Rd /trunk/Matrix/man/dtRMatrix-class-def.Rd /trunk/Matrix/man/dtpMatrix-class.Rd /trunk/Matrix/man/dtrMatrix-class.Rd /trunk/Matrix/man/expm.Rd /trunk/Matrix/man/generalMatrix-class.Rd /trunk/Matrix/man/index-class.Rd /trunk/Matrix/man/ldenseMatrix-class.Rd /trunk/Matrix/man/ldiMatrix-class.Rd /trunk/Matrix/man/lgeMatrix-class.Rd /trunk/Matrix/man/lmer-class.Rd /trunk/Matrix/man/lmer.Rd /trunk/Matrix/man/lsparseMatrix-classes.Rd /trunk/Matrix/man/lsyMatrix-class.Rd /trunk/Matrix/man/ltrMatrix-class.Rd /trunk/Matrix/man/lu.Rd /trunk/Matrix/man/mcmcsamp.Rd /trunk/Matrix/man/pMatrix-class.Rd /trunk/Matrix/man/pedigree-class.Rd /trunk/Matrix/man/pedigree.Rd /trunk/Matrix/man/sparseMatrix-class.Rd /trunk/Matrix/man/symmetricMatrix-class.Rd /trunk/Matrix/man/tcrossprod.Rd /trunk/Matrix/man/triangularMatrix-class.Rd /trunk/Matrix/man/unused-classes.Rd
|
| 2059 |
7534 d 21 h |
maechler |
/trunk/Matrix/ |
make tcrossprod() use 2 arguments (x, y=NULL) |
|
/trunk/Matrix/R/AllGeneric.R /trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/ddenseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dgTMatrix.R /trunk/Matrix/R/dgeMatrix.R /trunk/Matrix/R/lgCMatrix.R /trunk/Matrix/TODO /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/ddenseMatrix-class.Rd /trunk/Matrix/man/dgeMatrix-class.Rd /trunk/Matrix/man/lsparseMatrix-classes.Rd /trunk/Matrix/man/tcrossprod.Rd /trunk/Matrix/tests/dtpMatrix.R
|
| 2022 |
7550 d 20 h |
bates |
/trunk/Matrix/ |
Matrix multiplication and coersion at higher level |
|
/trunk/Matrix/R/Csparse.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/denseMatrix-class.Rd /trunk/Matrix/man/dgeMatrix-class.Rd /trunk/Matrix/src/Csparse.c /trunk/Matrix/src/Csparse.h /trunk/Matrix/src/Makefile /trunk/Matrix/src/Makefile.win /trunk/Matrix/src/Tsparse.c /trunk/Matrix/src/dense.c /trunk/Matrix/src/dense.h /trunk/Matrix/src/dgCMatrix.c /trunk/Matrix/src/dgTMatrix.c /trunk/Matrix/src/dsCMatrix.c /trunk/Matrix/src/init.c
|
| 1833 |
7615 d 23 h |
maechler |
/trunk/Matrix/ |
too many changes: rbind2 for dM*, cbind2(), "Math", "Arith" for sparse ones; more "s/gTMatrix/TsparseMatrix/" fixes; quite a few more tests, incl some for *all* classes |
|
/trunk/Matrix/R/dsparseMatrix.R /trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/ChangeLog /trunk/Matrix/DESCRIPTION /trunk/Matrix/NAMESPACE /trunk/Matrix/R/AllClass.R /trunk/Matrix/R/AllGeneric.R /trunk/Matrix/R/Auxiliaries.R /trunk/Matrix/R/Matrix.R /trunk/Matrix/R/Tsparse.R /trunk/Matrix/R/dMatrix.R /trunk/Matrix/R/ddenseMatrix.R /trunk/Matrix/R/denseMatrix.R /trunk/Matrix/R/dgCMatrix.R /trunk/Matrix/R/dgTMatrix.R /trunk/Matrix/R/dgeMatrix.R /trunk/Matrix/R/dsyMatrix.R /trunk/Matrix/R/dtrMatrix.R /trunk/Matrix/R/lgTMatrix.R /trunk/Matrix/R/lsparseMatrix.R /trunk/Matrix/R/sparseMatrix.R /trunk/Matrix/inst/test-tools.R /trunk/Matrix/man/Matrix-class.Rd /trunk/Matrix/man/Subassign-methods.Rd /trunk/Matrix/man/TsparseMatrix-class.Rd /trunk/Matrix/man/Xtrct-methods.Rd /trunk/Matrix/man/dMatrix-class.Rd /trunk/Matrix/man/ddenseMatrix-class.Rd /trunk/Matrix/man/dgCMatrix-class.Rd /trunk/Matrix/man/dsCMatrix-class.Rd /trunk/Matrix/man/dsparseMatrix-class.Rd /trunk/Matrix/man/dsyMatrix-class.Rd /trunk/Matrix/man/dtCMatrix-class.Rd /trunk/Matrix/man/dtrMatrix-class.Rd /trunk/Matrix/man/lsparseMatrix-classes.Rd /trunk/Matrix/man/sparseMatrix-class.Rd /trunk/Matrix/src/Csparse.c /trunk/Matrix/tests/Class+Meth.R /trunk/Matrix/tests/bind.R /trunk/Matrix/tests/dgTMatrix.R /trunk/Matrix/tests/group-methods.R /trunk/Matrix/tests/indexing.R /trunk/Matrix/tests/indexing.Rout.save /trunk/Matrix/tests/matprod.R
|