R-packages – /branches/Matrix-APIchange/R/lsCMatrix.R

Rev 4529 – Creating a branch for the API changes from the 0.99875 ...

bates — Sun, 01 Jul 2007 13:27:16 +0000

bates – 1 file(s) modified
Creating a branch for the API changes from the 0.99875 series to the 0.999375 series

+ /branches/Matrix-APIchange (copied from /trunk/Matrix@4528)

Rev 4124 – typo

maechler — Sat, 03 Feb 2007 21:07:00 +0000

maechler – 1 file(s) modified
typo

~ /trunk/Matrix/R/lsCMatrix.R

Rev 4095 – nnzero(), length(), "Ops" & "Logic", many more setAs(); misc.fixes

maechler — Tue, 23 Jan 2007 17:17:15 +0000

maechler – 41 file(s) modified
nnzero(), length(), "Ops" & "Logic", many more setAs(); misc.fixes

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/band.Rd
~ /trunk/Matrix/man/CHMfactor-class.Rd
~ /trunk/Matrix/man/Cholesky.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dtRMatrix-class-def.Rd
~ /trunk/Matrix/man/ldenseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/ndenseMatrix-class.Rd
~ /trunk/Matrix/man/ngeMatrix-class.Rd
+ /trunk/Matrix/man/nnzero.Rd
~ /trunk/Matrix/man/nsparseMatrix-classes.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/lsTMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/ltTMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/ndenseMatrix.R
~ /trunk/Matrix/R/ngTMatrix.R
~ /trunk/Matrix/R/nsCMatrix.R
~ /trunk/Matrix/R/ntCMatrix.R
~ /trunk/Matrix/R/Ops.R
~ /trunk/Matrix/R/pMatrix.R
+ /trunk/Matrix/R/triangularMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 3950 – fully-sparse solve() for dsC; indexing & comparison fixes

maechler — Fri, 03 Nov 2006 23:18:07 +0000

maechler – 24 file(s) modified
fully-sparse solve() for dsC; indexing & comparison fixes

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/lsTMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/tests/validObj.R

Rev 3876 – Matrix(0, d,d) should also give sparse (not diagonal); general_to_symmetric; notably ...

maechler — Fri, 06 Oct 2006 15:44:01 +0000

maechler – 16 file(s) modified
Matrix(0, d,d) should also give sparse (not diagonal); general_to_symmetric; notably for lsC*; more coercions; first cut at Csparse_drop()

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/tests/simple.R

Rev 3836 – more coercion methods (for rare matrices) => less exceptions

maechler — Fri, 29 Sep 2006 09:39:50 +0000

maechler – 17 file(s) modified
more coercion methods (for rare matrices) => less exceptions

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/nsparseMatrix-classes.Rd
~ /trunk/Matrix/man/TsparseMatrix-class.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgRMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
+ /trunk/Matrix/R/lsTMatrix.R
+ /trunk/Matrix/R/nsTMatrix.R
~ /trunk/Matrix/R/ntTMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/tests/Class+Meth.R
~ /trunk/Matrix/tests/indexing.R

Rev 3787 – several small fixes + more tests for "lMatrix" classes; "Compare"; ...

maechler — Sat, 16 Sep 2006 21:03:12 +0000

maechler – 18 file(s) modified
several small fixes + more tests for "lMatrix" classes; "Compare"; "chol"

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/Cholesky-class.Rd
~ /trunk/Matrix/man/Cholesky.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
x /trunk/Matrix/man/ndiMatrix-class.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/lMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/nsCMatrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/other-pkgs.R

Rev 3502 – Move methods to the CsparseMatrix class

bates — Sat, 26 Aug 2006 03:29:36 +0000

bates – 21 file(s) modified
Move methods to the CsparseMatrix class

~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lgCMatrix.c
~ /trunk/Matrix/src/lgCMatrix.h
~ /trunk/Matrix/src/lgTMatrix.c
~ /trunk/Matrix/src/lgTMatrix.h
~ /trunk/Matrix/src/lsCMatrix.c
~ /trunk/Matrix/src/lsCMatrix.h
~ /trunk/Matrix/src/ltCMatrix.c

Rev 3478 – Disable chol methods for lsCMatrix class temporarily; Comment out old ...

bates — Wed, 23 Aug 2006 21:32:30 +0000

bates – 3 file(s) modified
Disable chol methods for lsCMatrix class temporarily; Comment out old code in src/lsCMatrix.[ch]

~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/src/lsCMatrix.c
~ /trunk/Matrix/src/lsCMatrix.h

Rev 3410 – eliminate sCMatrix_to_gCMatrix now that we have (almost identical) Csparse_symmetric_to_general

maechler — Tue, 15 Aug 2006 18:21:49 +0000

maechler – 6 file(s) modified
eliminate sCMatrix_to_gCMatrix now that we have (almost identical) Csparse_symmetric_to_general

~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsCMatrix.h
~ /trunk/Matrix/src/init.c

Rev 3401 – Generalize conversions

bates — Sat, 12 Aug 2006 17:31:39 +0000

bates – 19 file(s) modified
Generalize conversions

~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/chm_common.h
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dgTMatrix.h
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Tsparse.c
~ /trunk/Matrix/src/Tsparse.h

Rev 3340 – many method cleanups; notably some "dgC" -> "Csparse" generaliztations

maechler — Sat, 22 Jul 2006 17:59:53 +0000

maechler – 41 file(s) modified
many method cleanups; notably some "dgC" -> "Csparse" generaliztations

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/Done
~ /trunk/Matrix/man/band.Rd
~ /trunk/Matrix/man/CsparseMatrix-class.Rd
~ /trunk/Matrix/man/ddenseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
+ /trunk/Matrix/man/replValue-class.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/diagMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/pedigree.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/tests/bind.R
~ /trunk/Matrix/tests/bind.Rout.save
~ /trunk/Matrix/tests/indexing.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/matprod.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 3172 – useDynlib(*, .registration=TRUE)

maechler — Tue, 23 May 2006 08:01:44 +0000

maechler – 33 file(s) modified
useDynlib(*, .registration=TRUE)

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgRMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/eigen.R
~ /trunk/Matrix/R/lCholCMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/ltTMatrix.R
~ /trunk/Matrix/R/LU.R
~ /trunk/Matrix/R/pedigree.R
~ /trunk/Matrix/R/Tsparse.R

Rev 2255 – Class cleanup; particularly ldense* ones

maechler — Mon, 23 Jan 2006 16:04:12 +0000

maechler – 24 file(s) modified
Class cleanup; particularly ldense* ones

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgRMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/ldenseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/lsyMatrix-class.Rd
~ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
x /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/ltTMatrix.R
~ /trunk/Matrix/TODO

Rev 2236 – "dsy" no longer extends "dge"; other small fixes

maechler — Fri, 20 Jan 2006 18:13:39 +0000

maechler – 14 file(s) modified
"dsy" no longer extends "dge"; other small fixes

~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/man/Subassign-methods.Rd
~ /trunk/Matrix/man/Xtrct-methods.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgRMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/tests/validObj.R

Rev 1998 – Adding PACKAGE = to .Call

bates — Fri, 11 Nov 2005 21:22:08 +0000

bates – 15 file(s) modified
Adding PACKAGE = to .Call

~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/eigen.R
~ /trunk/Matrix/R/lCholCMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/LU.R
~ /trunk/Matrix/R/pdmatrix.R
~ /trunk/Matrix/R/sparseMatrix.R

Rev 1857 – some "Summary" methods; some "Compare" group methods; logical dense matrices

maechler — Wed, 28 Sep 2005 08:56:42 +0000

maechler – 37 file(s) modified
some "Summary" methods; some "Compare" group methods; logical dense matrices

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
+ /trunk/Matrix/man/ldenseMatrix-class.Rd
+ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
+ /trunk/Matrix/man/lsyMatrix-class.Rd
+ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/unused-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
+ /trunk/Matrix/R/ldenseMatrix.R
+ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1527 – Adding logical sparse matrix methods

bates — Tue, 17 May 2005 17:16:39 +0000

bates – 5 file(s) modified
Adding logical sparse matrix methods

+ /trunk/Matrix/R/lCholCMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
+ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
+ /trunk/Matrix/R/ltCMatrix.R

Rev 1473 – More logical sparse matrix methods

bates — Tue, 10 May 2005 01:42:05 +0000

bates – 9 file(s) modified
More logical sparse matrix methods

~ /trunk/Matrix/INDEX
~ /trunk/Matrix/man/dMatrix-class.Rd
x /trunk/Matrix/man/lgCMatrix-class.Rd
+ /trunk/Matrix/man/lsparseMatrix-classes.Rd (copied from /trunk/Matrix/man/lgCMatrix-class.Rd@1471)
~ /trunk/Matrix/R/lgCMatrix.R
+ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lgCMatrix.c
~ /trunk/Matrix/src/lgCMatrix.h