| Rev |
Age |
Author |
Path |
Log message |
Diff |
Changes |
| 4529 |
6966 d 5 h |
bates |
/branches/Matrix-APIchange/ |
Creating a branch for the API changes from the 0.99875 series to the 0.999375 series |
|
/branches/Matrix-APIchange
|
| 4199 |
7065 d 4 h |
maechler |
/trunk/Matrix/ |
+ diff(.), + "dim<-"; cBind/rBind + cbind/rbind; indexing fixes - current state |
|
/trunk/Matrix/.Rbuildignore
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Ops.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/ndenseMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/R/zzz.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/Xtrct-methods.Rd
/trunk/Matrix/man/diagonalMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
|
| 4095 |
7125 d 1 h |
maechler |
/trunk/Matrix/ |
nnzero(), length(), "Ops" & "Logic", many more setAs(); misc.fixes |
|
/trunk/Matrix/R/triangularMatrix.R
/trunk/Matrix/man/nnzero.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Ops.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgTMatrix.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/lsTMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/R/ltTMatrix.R
/trunk/Matrix/R/ndenseMatrix.R
/trunk/Matrix/R/ngTMatrix.R
/trunk/Matrix/R/nsCMatrix.R
/trunk/Matrix/R/ntCMatrix.R
/trunk/Matrix/R/pMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/CHMfactor-class.Rd
/trunk/Matrix/man/Cholesky.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/band.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dtRMatrix-class-def.Rd
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/ndenseMatrix-class.Rd
/trunk/Matrix/man/ngeMatrix-class.Rd
/trunk/Matrix/man/nsparseMatrix-classes.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/tests/simple.R
|
| 3755 |
7258 d 21 h |
maechler |
/trunk/Matrix/ |
new nMatrix and subclasses; lsparse change to have x slot; many consequences |
|
/trunk/Matrix/R/lMatrix.R
/trunk/Matrix/R/ndenseMatrix.R
/trunk/Matrix/R/ngCMatrix.R
/trunk/Matrix/R/ngTMatrix.R
/trunk/Matrix/R/nsCMatrix.R
/trunk/Matrix/R/nsparseMatrix.R
/trunk/Matrix/R/ntCMatrix.R
/trunk/Matrix/R/ntTMatrix.R
/trunk/Matrix/man/nMatrix-class.Rd
/trunk/Matrix/man/ndenseMatrix-class.Rd
/trunk/Matrix/man/ndiMatrix-class.Rd
/trunk/Matrix/man/ngeMatrix-class.Rd
/trunk/Matrix/man/nsparseMatrix-classes.Rd
/trunk/Matrix/man/nsyMatrix-class.Rd
/trunk/Matrix/man/ntrMatrix-class.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgCMatrix.R
/trunk/Matrix/R/lgTMatrix.R
/trunk/Matrix/R/lsparseMatrix.R
/trunk/Matrix/R/pMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/inst/doc/Intro2Matrix.Rnw
/trunk/Matrix/inst/test-tools.R
/trunk/Matrix/man/CHMfactor-class.Rd
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/band.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/ldenseMatrix-class.Rd
/trunk/Matrix/man/lgeMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/man/lsyMatrix-class.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsTMatrix.c
/trunk/Matrix/src/dtTMatrix.c
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ldense.c
/trunk/Matrix/src/ldense.h
/trunk/Matrix/tests/Class+Meth.R
/trunk/Matrix/tests/matprod.R
/trunk/Matrix/tests/simple.R
|
| 3678 |
7266 d 0 h |
bates |
/trunk/Matrix/ |
Merging changes from Matrix-nolmer branch |
|
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/pedigree.R
/trunk/Matrix/data/sleepstudy.rda
/trunk/Matrix/man/BIC.Rd
/trunk/Matrix/man/VarCorr-class.Rd
/trunk/Matrix/man/VarCorr.Rd
/trunk/Matrix/man/fixef.Rd
/trunk/Matrix/man/hatTrace.Rd
/trunk/Matrix/man/lmer-class.Rd
/trunk/Matrix/man/lmer.Rd
/trunk/Matrix/man/mcmcsamp.Rd
/trunk/Matrix/man/pedigree-class.Rd
/trunk/Matrix/man/pedigree.Rd
/trunk/Matrix/man/ranef.Rd
/trunk/Matrix/man/sleepstudy.Rd
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
/trunk/Matrix/src/pedigree.c
/trunk/Matrix/src/pedigree.h
/trunk/Matrix/tests/lmer.R
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/Syms.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ltCMatrix.c
/trunk/Matrix/src/ltCMatrix.h
|
| 3424 |
7283 d 20 h |
bates |
/trunk/Matrix/R/ |
Use C code for diagU2N in CsparseMatrix classes |
|
/trunk/Matrix/R/dtCMatrix.R
|
| 3404 |
7287 d 0 h |
bates |
/trunk/Matrix/ |
Use CHOLMOD code for general methods at CsparseMatrix, TsparseMatrix, denseMatrix or matrix level when possible |
|
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgCMatrix.h
/trunk/Matrix/src/init.c
|
| 3401 |
7289 d 1 h |
bates |
/trunk/Matrix/ |
Generalize conversions |
|
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/Tsparse.c
/trunk/Matrix/src/Tsparse.h
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/src/chm_common.h
/trunk/Matrix/src/dense.c
/trunk/Matrix/src/dgCMatrix.c
/trunk/Matrix/src/dgTMatrix.c
/trunk/Matrix/src/dgTMatrix.h
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/init.c
|
| 3340 |
7310 d 1 h |
maechler |
/trunk/Matrix/ |
many method cleanups; notably some "dgC" -> "Csparse" generaliztations |
|
/trunk/Matrix/man/replValue-class.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/Done
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/dMatrix.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/pedigree.R
/trunk/Matrix/TODO
/trunk/Matrix/man/CsparseMatrix-class.Rd
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/Subassign-methods.Rd
/trunk/Matrix/man/band.Rd
/trunk/Matrix/man/dMatrix-class.Rd
/trunk/Matrix/man/ddenseMatrix-class.Rd
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/man/dgeMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/pMatrix-class.Rd
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/tests/bind.R
/trunk/Matrix/tests/bind.Rout.save
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
/trunk/Matrix/tests/matprod.R
/trunk/Matrix/tests/simple.R
|
| 3172 |
7370 d 11 h |
maechler |
/trunk/Matrix/ |
useDynlib(*, .registration=TRUE) |
|
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/LU.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgRMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dpoMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsparseMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/eigen.R
/trunk/Matrix/R/lCholCMatrix.R
/trunk/Matrix/R/ldenseMatrix.R
/trunk/Matrix/R/lgCMatrix.R
/trunk/Matrix/R/lgTMatrix.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/lsCMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/R/ltTMatrix.R
/trunk/Matrix/R/pedigree.R
|
| 3112 |
7393 d 3 h |
bates |
/trunk/Matrix/ |
Add special solve method for unit upper triangular matrices |
|
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
|
| 3092 |
7398 d 0 h |
bates |
/trunk/Matrix/ |
Unit diagonal property in transpose of dtCMatrix |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/dtCMatrix.R
|
| 3078 |
7404 d 9 h |
maechler |
/trunk/Matrix/ |
tT -> tC; and diagU2N() for solve(<dtC>) |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/tests/simple.R
|
| 3070 |
7408 d 6 h |
bates |
/trunk/Matrix/ |
Add CSparse-based solve methods for dtCMatrix class |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
|
| 3034 |
7423 d 23 h |
maechler |
/trunk/Matrix/ |
coercions from dgC to triangular (dtC) and symmetric (dsC), etc |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/tests/simple.R
|
| 2265 |
7487 d 19 h |
bates |
/trunk/Matrix/ |
Use coersion for transpose of dtCMatrix class |
|
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
|
| 2256 |
7490 d 2 h |
maechler |
/trunk/Matrix/ |
add to tests: now also check setAs("matrix", *) |
|
/trunk/Matrix/R/dpoMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/man/Matrix.Rd
/trunk/Matrix/man/dpoMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/tests/Class+Meth.R
|
| 2208 |
7496 d 23 h |
maechler |
/trunk/Matrix/ |
make Matrix() "smart" -- with help of quite a few new setAs(. , .) settings |
|
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/ltCMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/Matrix.Rd
/trunk/Matrix/man/dtRMatrix-class-def.Rd
/trunk/Matrix/man/lsparseMatrix-classes.Rd
/trunk/Matrix/src/chm_common.c
/trunk/Matrix/tests/base-matrix-fun.R
/trunk/Matrix/tests/indexing.Rout.save
/trunk/Matrix/tests/simple.R
|
| 1997 |
7563 d 4 h |
bates |
/trunk/Matrix/R/ |
Adding PACKAGE = to .Call lines |
|
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/bCrosstab.R
/trunk/Matrix/R/dgBCMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgRMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dgeMatrix.R
/trunk/Matrix/R/dpoMatrix.R
/trunk/Matrix/R/dppMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dsTMatrix.R
/trunk/Matrix/R/dspMatrix.R
/trunk/Matrix/R/dsyMatrix.R
/trunk/Matrix/R/dtCMatrix.R
|
| 1872 |
7603 d 23 h |
maechler |
/trunk/Matrix/ |
dtC -> dgC coercion |
|
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/man/dtCMatrix-class.Rd
|
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