R-packages – /branches/Matrix-APIchange/R/dsTMatrix.R

Rev 4549 – port changes (4545..4548) from trunk

maechler — Thu, 05 Jul 2007 12:22:06 +0000

maechler – 17 file(s) modified
port changes (4545..4548) from trunk

~ /branches/Matrix-APIchange/ChangeLog
~ /branches/Matrix-APIchange/Done
+ /branches/Matrix-APIchange/man/printSpMatrix.Rd (copied from /trunk/Matrix/man/printSpMatrix.Rd@4548)
~ /branches/Matrix-APIchange/man/sparseMatrix-class.Rd
~ /branches/Matrix-APIchange/NAMESPACE
~ /branches/Matrix-APIchange/R/ddenseMatrix.R
~ /branches/Matrix-APIchange/R/dsTMatrix.R
~ /branches/Matrix-APIchange/R/dtTMatrix.R
~ /branches/Matrix-APIchange/R/lgCMatrix.R
~ /branches/Matrix-APIchange/R/ngCMatrix.R
~ /branches/Matrix-APIchange/R/pMatrix.R
~ /branches/Matrix-APIchange/R/Rsparse.R
~ /branches/Matrix-APIchange/R/sparseMatrix.R
~ /branches/Matrix-APIchange/R/Tsparse.R
~ /branches/Matrix-APIchange/src/cs_utils.c
~ /branches/Matrix-APIchange/src/lgCMatrix.c
~ /branches/Matrix-APIchange/tests/Class+Meth.R

Rev 4529 – Creating a branch for the API changes from the 0.99875 ...

bates — Sun, 01 Jul 2007 13:27:16 +0000

bates – 1 file(s) modified
Creating a branch for the API changes from the 0.99875 series to the 0.999375 series

+ /branches/Matrix-APIchange (copied from /trunk/Matrix@4528)

Rev 3731 – Update description after removal of Metis et al.

bates — Fri, 08 Sep 2006 13:18:50 +0000

bates – 6 file(s) modified
Update description after removal of Metis et al.

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/INDEX
~ /trunk/Matrix/inst/Copyrights
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R

Rev 3502 – Move methods to the CsparseMatrix class

bates — Sat, 26 Aug 2006 03:29:36 +0000

bates – 21 file(s) modified
Move methods to the CsparseMatrix class

~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lgCMatrix.c
~ /trunk/Matrix/src/lgCMatrix.h
~ /trunk/Matrix/src/lgTMatrix.c
~ /trunk/Matrix/src/lgTMatrix.h
~ /trunk/Matrix/src/lsCMatrix.c
~ /trunk/Matrix/src/lsCMatrix.h
~ /trunk/Matrix/src/ltCMatrix.c

Rev 3488 – Use dup_mMatrix_as_dgeMatrix

bates — Thu, 24 Aug 2006 18:22:39 +0000

bates – 12 file(s) modified
Use dup_mMatrix_as_dgeMatrix

~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/sparseQR.R
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/dsTMatrix.c
~ /trunk/Matrix/src/dsTMatrix.h
~ /trunk/Matrix/src/dtTMatrix.c
~ /trunk/Matrix/src/dtTMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lsCMatrix.c
~ /trunk/Matrix/src/lsCMatrix.h

Rev 3401 – Generalize conversions

bates — Sat, 12 Aug 2006 17:31:39 +0000

bates – 19 file(s) modified
Generalize conversions

~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/Tsparse.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/src/chm_common.h
~ /trunk/Matrix/src/Csparse.c
~ /trunk/Matrix/src/Csparse.h
~ /trunk/Matrix/src/dense.c
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dgTMatrix.h
~ /trunk/Matrix/src/dsCMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Tsparse.c
~ /trunk/Matrix/src/Tsparse.h

Rev 3172 – useDynlib(*, .registration=TRUE)

maechler — Tue, 23 May 2006 08:01:44 +0000

maechler – 33 file(s) modified
useDynlib(*, .registration=TRUE)

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgRMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/eigen.R
~ /trunk/Matrix/R/lCholCMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/ltTMatrix.R
~ /trunk/Matrix/R/LU.R
~ /trunk/Matrix/R/pedigree.R
~ /trunk/Matrix/R/Tsparse.R

Rev 2256 – add to tests: now also check setAs("matrix", *)

maechler — Mon, 23 Jan 2006 16:55:43 +0000

maechler – 10 file(s) modified
add to tests: now also check setAs("matrix", *)

~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/tests/Class+Meth.R

Rev 2255 – Class cleanup; particularly ldense* ones

maechler — Mon, 23 Jan 2006 16:04:12 +0000

maechler – 24 file(s) modified
Class cleanup; particularly ldense* ones

~ /trunk/Matrix/DESCRIPTION
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgRMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/ldenseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/lsyMatrix-class.Rd
~ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
x /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/ltTMatrix.R
~ /trunk/Matrix/TODO

Rev 2208 – make Matrix() "smart" -- with help of quite a few ...

maechler — Mon, 16 Jan 2006 20:03:48 +0000

maechler – 24 file(s) modified
make Matrix() "smart" -- with help of quite a few new setAs(. , .) settings

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dtRMatrix-class-def.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/Matrix.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/Csparse.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/diagMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/src/chm_common.c
~ /trunk/Matrix/tests/base-matrix-fun.R
~ /trunk/Matrix/tests/indexing.Rout.save
~ /trunk/Matrix/tests/simple.R

Rev 1998 – Adding PACKAGE = to .Call

bates — Fri, 11 Nov 2005 21:22:08 +0000

bates – 15 file(s) modified
Adding PACKAGE = to .Call

~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtpMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/eigen.R
~ /trunk/Matrix/R/lCholCMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgCMatrix.R
~ /trunk/Matrix/R/lgTMatrix.R
~ /trunk/Matrix/R/lmer.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/LU.R
~ /trunk/Matrix/R/pdmatrix.R
~ /trunk/Matrix/R/sparseMatrix.R

Rev 1997 – Adding PACKAGE = to .Call lines

bates — Fri, 11 Nov 2005 14:57:22 +0000

bates – 14 file(s) modified
Adding PACKAGE = to .Call lines

~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/bCrosstab.R
~ /trunk/Matrix/R/dgBCMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgRMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dpoMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R

Rev 1869 – more coercions; particularly "d" <-> "l"; more tests (and more ...

maechler — Fri, 30 Sep 2005 17:28:00 +0000

maechler – 45 file(s) modified
more coercions; particularly "d" <-> "l"; more tests (and more FIXMEs!); fixing two "index-0 bugs"; ...

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/dCholCMatrix-class.Rd
~ /trunk/Matrix/man/denseMatrix-class.Rd
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
~ /trunk/Matrix/man/dtpMatrix-class.Rd
~ /trunk/Matrix/man/dtrMatrix-class.Rd
~ /trunk/Matrix/man/ldenseMatrix-class.Rd
~ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
~ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/pMatrix-class.Rd
~ /trunk/Matrix/man/sparseMatrix-class.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/denseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dtCMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/R/ldenseMatrix.R
~ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/Matrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/R/zzz.R
~ /trunk/Matrix/src/dgCMatrix.c
~ /trunk/Matrix/src/dgCMatrix.h
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/Makefile
~ /trunk/Matrix/tests/base-matrix-fun.R
~ /trunk/Matrix/tests/dg_Matrix.R
~ /trunk/Matrix/tests/group-methods.R
~ /trunk/Matrix/tests/simple.R
~ /trunk/Matrix/TODO

Rev 1857 – some "Summary" methods; some "Compare" group methods; logical dense matrices

maechler — Wed, 28 Sep 2005 08:56:42 +0000

maechler – 37 file(s) modified
some "Summary" methods; some "Compare" group methods; logical dense matrices

~ /trunk/Matrix/Done
~ /trunk/Matrix/man/dgCMatrix-class.Rd
~ /trunk/Matrix/man/dgeMatrix-class.Rd
~ /trunk/Matrix/man/dMatrix-class.Rd
~ /trunk/Matrix/man/dpoMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/man/dsparseMatrix-class.Rd
~ /trunk/Matrix/man/dsyMatrix-class.Rd
~ /trunk/Matrix/man/dtCMatrix-class.Rd
+ /trunk/Matrix/man/ldenseMatrix-class.Rd
+ /trunk/Matrix/man/lgeMatrix-class.Rd
~ /trunk/Matrix/man/lsparseMatrix-classes.Rd
+ /trunk/Matrix/man/lsyMatrix-class.Rd
+ /trunk/Matrix/man/ltrMatrix-class.Rd
~ /trunk/Matrix/man/Matrix-class.Rd
~ /trunk/Matrix/man/unused-classes.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllClass.R
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/Auxiliaries.R
~ /trunk/Matrix/R/ddenseMatrix.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgeMatrix.R
~ /trunk/Matrix/R/dMatrix.R
~ /trunk/Matrix/R/dppMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsparseMatrix.R
~ /trunk/Matrix/R/dspMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtrMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
+ /trunk/Matrix/R/ldenseMatrix.R
+ /trunk/Matrix/R/lgeMatrix.R
~ /trunk/Matrix/R/lsCMatrix.R
~ /trunk/Matrix/R/ltCMatrix.R
~ /trunk/Matrix/R/Matrix.R

Rev 1735 – Coercion method for graphNEL to sparseMatrix class

bates — Thu, 18 Aug 2005 21:31:07 +0000

bates – 9 file(s) modified
Coercion method for graphNEL to sparseMatrix class

~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/sparseMatrix.R
~ /trunk/Matrix/src/dgTMatrix.c
~ /trunk/Matrix/src/dgTMatrix.h
~ /trunk/Matrix/src/dsTMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/lmer.c
~ /trunk/Matrix/src/Mutils.c
~ /trunk/Matrix/src/Mutils.h

Rev 1706 – Add writeHB and writeMM methods and generic

bates — Mon, 08 Aug 2005 13:33:18 +0000

bates – 12 file(s) modified
Add writeHB and writeMM methods and generic

~ /trunk/Matrix/ChangeLog
~ /trunk/Matrix/man/externalFormats.Rd
+ /trunk/Matrix/man/writeHB.Rd
~ /trunk/Matrix/NAMESPACE
~ /trunk/Matrix/R/AllGeneric.R
~ /trunk/Matrix/R/dgCMatrix.R
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsCMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/src/HBMM.c
~ /trunk/Matrix/src/HBMM.h
~ /trunk/Matrix/src/init.c

Rev 1200 – more coercions

bates — Wed, 02 Mar 2005 19:53:53 +0000

bates – 5 file(s) modified
more coercions

~ /trunk/Matrix/man/dgTMatrix-class.Rd
~ /trunk/Matrix/man/dsCMatrix-class.Rd
~ /trunk/Matrix/R/dgTMatrix.R
~ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/src/dsTMatrix.c

Rev 1110 – Coercions and methods for the dsTMatrix class

bates — Thu, 17 Feb 2005 01:18:02 +0000

bates – 9 file(s) modified
Coercions and methods for the dsTMatrix class

+ /trunk/Matrix/R/dsTMatrix.R
~ /trunk/Matrix/R/dsyMatrix.R
~ /trunk/Matrix/R/dtTMatrix.R
~ /trunk/Matrix/src/DEPS.mkf
+ /trunk/Matrix/src/dsTMatrix.c
+ /trunk/Matrix/src/dsTMatrix.h
~ /trunk/Matrix/src/dtTMatrix.c
~ /trunk/Matrix/src/init.c
~ /trunk/Matrix/src/SOURCES_C.mkf