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Rev Age Author Path Log message Diff Changes
4529 6966 d 8 h bates /branches/Matrix-APIchange/ Creating a branch for the API changes from the 0.99875 series to the 0.999375 series  
/branches/Matrix-APIchange
4518 6968 d 5 h maechler /trunk/Matrix/ Math/Math2: setGeneric adaption for todays` R-devel  
/trunk/Matrix/.Rbuildignore
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/spMatrix.Rd
4354 7012 d 0 h maechler /trunk/Matrix/ part of sparseVector additions; in order to avoid merge conflicts  
/trunk/Matrix/R/sparseVector.R
/trunk/Matrix/man/sparseVector-class.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Ops.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgCMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/denseMatrix-class.Rd
/trunk/Matrix/man/diagonalMatrix-class.Rd
/trunk/Matrix/man/dsCMatrix-class.Rd
/trunk/Matrix/man/dtCMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
4199 7065 d 6 h maechler /trunk/Matrix/ + diff(.), + "dim<-"; cBind/rBind + cbind/rbind; indexing fixes - current state  
/trunk/Matrix/.Rbuildignore
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Ops.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/ddenseMatrix.R
/trunk/Matrix/R/diagMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/ndenseMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/R/zzz.R
/trunk/Matrix/TODO
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/TsparseMatrix-class.Rd
/trunk/Matrix/man/Xtrct-methods.Rd
/trunk/Matrix/man/diagonalMatrix-class.Rd
/trunk/Matrix/man/sparseMatrix-class.Rd
/trunk/Matrix/tests/indexing.R
/trunk/Matrix/tests/indexing.Rout.save
3678 7266 d 3 h bates /trunk/Matrix/ Merging changes from Matrix-nolmer branch  
/trunk/Matrix/R/lmer.R
/trunk/Matrix/R/pedigree.R
/trunk/Matrix/data/sleepstudy.rda
/trunk/Matrix/man/BIC.Rd
/trunk/Matrix/man/VarCorr-class.Rd
/trunk/Matrix/man/VarCorr.Rd
/trunk/Matrix/man/fixef.Rd
/trunk/Matrix/man/hatTrace.Rd
/trunk/Matrix/man/lmer-class.Rd
/trunk/Matrix/man/lmer.Rd
/trunk/Matrix/man/mcmcsamp.Rd
/trunk/Matrix/man/pedigree-class.Rd
/trunk/Matrix/man/pedigree.Rd
/trunk/Matrix/man/ranef.Rd
/trunk/Matrix/man/sleepstudy.Rd
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
/trunk/Matrix/src/pedigree.c
/trunk/Matrix/src/pedigree.h
/trunk/Matrix/tests/lmer.R
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllClass.R
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/src/DEPS.mkf
/trunk/Matrix/src/Mutils.c
/trunk/Matrix/src/Mutils.h
/trunk/Matrix/src/SOURCES_C.mkf
/trunk/Matrix/src/Syms.h
/trunk/Matrix/src/dtCMatrix.c
/trunk/Matrix/src/dtCMatrix.h
/trunk/Matrix/src/init.c
/trunk/Matrix/src/ltCMatrix.c
/trunk/Matrix/src/ltCMatrix.h
3477 7278 d 0 h bates /trunk/Matrix/ Add Cholesky generic and method for dsCMatrix. Use CHOLMOD for chol().  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/src/dsCMatrix.c
/trunk/Matrix/src/dsCMatrix.h
3427 7283 d 7 h maechler /trunk/Matrix/ export zapsmall(); define as.numeric and as.logical methods (not yet finished); fix printing "U" diagonal triangular sparse  
/trunk/Matrix/ChangeLog
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/Matrix-class.Rd
/trunk/Matrix/man/dMatrix-class.Rd
3348 7301 d 13 h maechler /trunk/Matrix/R/ cleanup  
/trunk/Matrix/R/AllGeneric.R
3220 7354 d 5 h bates /trunk/Matrix/R/ No longer create a generic for qqmath  
/trunk/Matrix/R/AllGeneric.R
3180 7366 d 2 h bates /trunk/Matrix/ Add isNested and for an identity permutation for nested grouping factors  
/trunk/Matrix/ChangeLog
/trunk/Matrix/INDEX
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
3166 7371 d 2 h bates /trunk/Matrix/R/ Add a generic for qqmath (maybe not a good idea)  
/trunk/Matrix/R/AllGeneric.R
3145 7376 d 4 h bates /trunk/Matrix/ lowerTriMatrix to tril, upperTriMatrix to triu, added band extractor  
/trunk/Matrix/man/band.Rd
/trunk/Matrix/ChangeLog
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Csparse.R
3134 7377 d 23 h bates /trunk/Matrix/ Generics lowerTriMatrix and upperTriMatrix and C function Csparse_band  
/trunk/Matrix/ChangeLog
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Csparse.R
/trunk/Matrix/src/Csparse.c
/trunk/Matrix/src/Csparse.h
/trunk/Matrix/src/init.c
3080 7404 d 7 h bates /trunk/Matrix/ Remove postVar generic and methods  
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
3054 7414 d 21 h bates /trunk/Matrix/ Added qqmath method for ranef.lmer and postVar for ranef methods  
/trunk/Matrix/ChangeLog
/trunk/Matrix/INDEX
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/TODO
/trunk/Matrix/src/init.c
/trunk/Matrix/src/lmer.c
/trunk/Matrix/src/lmer.h
3034 7424 d 1 h maechler /trunk/Matrix/ coercions from dgC to triangular (dtC) and symmetric (dsC), etc  
/trunk/Matrix/ChangeLog
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Auxiliaries.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/Tsparse.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/dgTMatrix.R
/trunk/Matrix/R/dsCMatrix.R
/trunk/Matrix/R/dtCMatrix.R
/trunk/Matrix/R/dtTMatrix.R
/trunk/Matrix/R/dtpMatrix.R
/trunk/Matrix/R/dtrMatrix.R
/trunk/Matrix/R/sparseMatrix.R
/trunk/Matrix/man/dgCMatrix-class.Rd
/trunk/Matrix/man/dgTMatrix-class.Rd
/trunk/Matrix/tests/simple.R
2348 7447 d 10 h maechler /trunk/Matrix/ lmer(): dropped non-sensical 'x' and 'y' arguments  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/src/lmer.c
2212 7495 d 22 h bates /trunk/Matrix/ Munging the data frame  
/trunk/Matrix/DESCRIPTION
/trunk/Matrix/NAMESPACE
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/lmer.R
/trunk/Matrix/man/lmer.Rd
/trunk/Matrix/src/lmer.c
2120 7510 d 22 h maechler /trunk/Matrix/R/ isSymmetric() generic must match isSymmetric in R-devel  
/trunk/Matrix/R/AllGeneric.R
/trunk/Matrix/R/Matrix.R
/trunk/Matrix/R/denseMatrix.R
/trunk/Matrix/R/sparseMatrix.R
2068 7532 d 7 h maechler /trunk/Matrix/R/ Brian's version of 2-arg tcrossprod()  
/trunk/Matrix/R/AllGeneric.R

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