/* * R : A Computer Language for Statistical Data Analysis * Copyright (C) 1995, 1996 Robert Gentleman and Ross Ihaka * Copyright (C) 1997--2023 The R Core Team * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, a copy is available at * https://www.R-project.org/Licenses/ */ /* char here is handled as a whole string */ /* See system.txt for a description of functions */ #ifdef HAVE_CONFIG_H # include #endif #define R_USE_SIGNALS 1 #include #include /* necessary for some (older, i.e., ~ <= 1997) Linuxen, and apparently also some AIX systems. NB, included unconditionally later on. */ #ifndef FD_SET # ifdef HAVE_SYS_TIME_H # include # endif #endif #ifdef HAVE_UNISTD_H # include #endif #include #include "Fileio.h" // This creates the interface pointers in this file #define __SYSTEM__ #define R_INTERFACE_PTRS 1 #include #undef __SYSTEM__ #include "Runix.h" attribute_hidden FILE *ifp = NULL; /* used in sys-std.c */ attribute_hidden Rboolean UsingReadline = TRUE; /* used in sys-std.c & ../main/platform.c and also in sys-unix.c for tilde expansion */ /* call pointers to allow interface switching */ NORET void R_Suicide(const char *s) { ptr_R_Suicide(s); // This should not have returned, but belt-and-braces exit(2); // same status as Rstd_Suicide } void R_ShowMessage(const char *s) { ptr_R_ShowMessage(s); } int R_ReadConsole(const char *prompt, unsigned char *buf, int len, int addtohistory) { return ptr_R_ReadConsole(prompt, buf, len, addtohistory); } void R_WriteConsole(const char *buf, int len) {if (ptr_R_WriteConsole) ptr_R_WriteConsole(buf, len); else ptr_R_WriteConsoleEx(buf, len, 0); } void R_WriteConsoleEx(const char *buf, int len, int otype) {if (ptr_R_WriteConsole) ptr_R_WriteConsole(buf, len); else ptr_R_WriteConsoleEx(buf, len, otype); } void R_ResetConsole(void) { ptr_R_ResetConsole(); } #ifndef HAVE_AQUA void R_FlushConsole(void) { ptr_R_FlushConsole(); } #endif void R_ClearerrConsole(void) { ptr_R_ClearerrConsole(); } void R_Busy(int which) { ptr_R_Busy(which); } NORET void R_CleanUp(SA_TYPE saveact, int status, int runLast) { ptr_R_CleanUp(saveact, status, runLast); // This should not have returned, but belt-and-braces exit(status); } attribute_hidden int R_ShowFiles(int nfile, const char **file, const char **headers, const char *wtitle, Rboolean del, const char *pager) { return ptr_R_ShowFiles(nfile, file, headers, wtitle, del, pager); } attribute_hidden int R_ChooseFile(int _new, char *buf, int len) { return ptr_R_ChooseFile(_new, buf, len); } void R_setStartTime(void); /* in sys-unix.c */ #ifdef HAVE_AQUA /* used here and in main/sysutils.c (for system). */ Rboolean useaqua = FALSE; // Finally in Sep 2012 R.app sets ptr_R_FlushConsole #include DL_FUNC ptr_do_flushconsole; void R_FlushConsole(void) { if (ptr_R_FlushConsole) ptr_R_FlushConsole(); else if (ptr_do_flushconsole) ptr_do_flushconsole(); } #endif void R_setupHistory(void) { int value, ierr; char *p; if ((R_HistoryFile = getenv("R_HISTFILE")) == NULL) R_HistoryFile = ".Rhistory"; R_HistorySize = 512; if ((p = getenv("R_HISTSIZE"))) { value = (int) R_Decode2Long(p, &ierr); if (ierr != 0 || value < 0) R_ShowMessage("WARNING: invalid R_HISTSIZE ignored;"); else R_HistorySize = value; } } #if defined(HAVE_SYS_RESOURCE_H) && defined(HAVE_GETRLIMIT) /* Needed by AIX and formerly by macOS (but not by POSIX). http://www.ibm.com/support/knowledgecenter/ssw_aix_61/com.ibm.aix.basetrf1/getrlimit_64.htm */ # ifdef HAVE_SYS_TIME_H # include # endif # include # ifdef HAVE_LIBC_STACK_END extern void * __libc_stack_end; # endif # ifdef HAVE_KERN_USRSTACK # include # include # include # endif #endif int R_running_as_main_program = 0; /* In ../main/main.c, to avoid inlining */ extern uintptr_t dummy_ii(void); /* Protection against embedded misuse, PR#15420 */ static int num_initialized = 0; static char* unescape_arg(char *p, char* avp) { /* Undo the escaping done in the front end */ char *q; for(q = avp; *q; q++) { if(*q == '~' && *(q+1) == '+' && *(q+2) == '~') { q += 2; *p++ = ' '; } else if(*q == '~' && *(q+1) == 'n' && *(q+2) == '~') { q += 2; *p++ = '\n'; } else if(*q == '~' && *(q+1) == 't' && *(q+2) == '~') { q += 2; *p++ = '\t'; } else *p++ = *q; } return p; } /* for thr_stksegment */ #if defined(HAVE_THREAD_H) # include #endif #include /* thr_stksegment */ extern int R_isWriteableDir(char *path); int Rf_initialize_R(int ac, char **av) { int i, ioff = 1, j; Rboolean useX11 = TRUE, useTk = FALSE; char *p, msg[1024], cmdlines[10000], **avv; structRstart rstart; Rstart Rp = &rstart; Rboolean force_interactive = FALSE; if (num_initialized++) { fprintf(stderr, "%s", "R is already initialized\n"); exit(1); } #if defined(HAVE_SYS_RESOURCE_H) && defined(HAVE_GETRLIMIT) { /* getrlimit is POSIX: https://pubs.opengroup.org/onlinepubs/9699919799/functions/getrlimit.html */ struct rlimit rlim; R_CStackDir = C_STACK_DIRECTION; if(getrlimit(RLIMIT_STACK, &rlim) == 0) { /* 'unlimited' is represented by RLIM_INFINITY, which is a very large (but maybe not the largest) representable value. The standard allows the values RLIM_SAVED_CUR and RLIB_SAVED_MAX, apparently used on 32-bit AIX. (http://www.ibm.com/support/knowledgecenter/ssw_aix_61/com.ibm.aix.basetrf1/getrlimit_64.htm) These may or may not be different from RLIM_INFINITY (they are the same on Linux and macOS but not Solaris where they are larger). We will assume that unrepresentable limits are very large. This is cautious: it is extremely unlikely that the soft limit is either unlimited or unrepresentable. */ rlim_t lim = rlim.rlim_cur; #if defined(RLIM_SAVED_CUR) && defined(RLIM_SAVED_MAX) if (lim == RLIM_SAVED_CUR || lim == RLIM_SAVED_MAX) lim = RLIM_INFINITY; #endif if (lim != RLIM_INFINITY) R_CStackLimit = (uintptr_t) lim; } #if defined(HAVE_LIBC_STACK_END) { R_CStackStart = (uintptr_t) __libc_stack_end; /* The libc stack end is not exactly at the stack start, so one cannot access __libc_stack_end - R_CStackLimit/getrlimit + 1. We have to find the real stack start that matches getrlimit. A modern alternative to __libc_stack_end and to parsing /proc/maps directly is pthread_getattr_np; it doesn't provide the exact stack start, either, but provides a matching stack size smaller than the one obtained from getrlimit. However, pthread_getattr_np may have not worked properly on old Linux distributions. */ /* based on GDB relocatable.c */ FILE *f; f = fopen("/proc/self/maps", "r"); if (f) { for(;;) { int c; unsigned long start, end; if (fscanf(f, "%lx-%lx", &start, &end) == 2 && R_CStackStart >= (uintptr_t)start && R_CStackStart < (uintptr_t)end) { /* would this be ok for R_CStackDir == -1? */ R_CStackStart = (uintptr_t) ((R_CStackDir == 1) ? end : start); break; } for(c = getc(f); c != '\n' && c != EOF; c = getc(f)); if (c == EOF) { /* could also abort here, but R will usually work with R_CStackStart set just for __libc_stack_end */ fprintf(stderr, "WARNING: Error parsing /proc/self/maps!\n"); break; } } fclose(f); } } #elif defined(HAVE_KERN_USRSTACK) { /* Borrowed from mzscheme/gc/os_dep.c */ int nm[2] = {CTL_KERN, KERN_USRSTACK}; void * base; size_t len = sizeof(void *); (void) sysctl(nm, 2, &base, &len, NULL, 0); R_CStackStart = (uintptr_t) base; } #elif defined(HAVE_THR_STKSEGMENT) { /* Solaris */ stack_t stack; if (thr_stksegment(&stack)) R_Suicide("Cannot obtain stack information (thr_stksegment)."); R_CStackStart = (uintptr_t) stack.ss_sp; /* This _may_ have to be adjusted for a (perhaps theoretical) platform where the stack would grow upwards. The stack size could be updated based on stack.ss_size, but experiments suggest getrlimit is safe here. */ } #else if(R_running_as_main_program) { /* This is not the main program, but unless embedded it is near the top, 5540 bytes away when checked. */ R_CStackStart = (uintptr_t) &i + (6000 * R_CStackDir); } #endif if(R_CStackStart == (uintptr_t)(-1)) R_CStackLimit = (uintptr_t)(-1); /* never set */ /* setup_Rmainloop includes (disabled) code to test stack detection */ } #endif ptr_R_Suicide = Rstd_Suicide; ptr_R_ShowMessage = Rstd_ShowMessage; ptr_R_ReadConsole = Rstd_ReadConsole; ptr_R_WriteConsole = Rstd_WriteConsole; ptr_R_ResetConsole = Rstd_ResetConsole; ptr_R_FlushConsole = Rstd_FlushConsole; ptr_R_ClearerrConsole = Rstd_ClearerrConsole; ptr_R_Busy = Rstd_Busy; ptr_R_CleanUp = Rstd_CleanUp; ptr_R_ShowFiles = Rstd_ShowFiles; ptr_R_ChooseFile = Rstd_ChooseFile; ptr_R_loadhistory = Rstd_loadhistory; ptr_R_savehistory = Rstd_savehistory; ptr_R_addhistory = Rstd_addhistory; ptr_R_EditFile = NULL; /* for future expansion */ R_timeout_handler = NULL; R_timeout_val = 0; R_GlobalContext = NULL; /* Make R_Suicide less messy... */ if((R_Home = R_HomeDir()) == NULL) R_Suicide("R home directory is not defined"); BindDomain(R_Home); process_system_Renviron(); R_setStartTime(); R_DefParamsEx(Rp, RSTART_VERSION); /* Store the command line arguments before they are processed by the R option handler. */ R_set_command_line_arguments(ac, av); cmdlines[0] = '\0'; /* first task is to select the GUI. If run from the shell script, only Tk|tk|X11|x11 are allowed. */ for(i = 0, avv = av; i < ac; i++, avv++) { if (!strcmp(*avv, "--args")) break; if(!strncmp(*avv, "--gui", 5) || !strncmp(*avv, "-g", 2)) { if(!strncmp(*avv, "--gui", 5) && strlen(*avv) >= 7) p = &(*avv)[6]; else { if(i+1 < ac) { avv++; p = *avv; ioff++; } else { snprintf(msg, 1024, _("WARNING: --gui or -g without value ignored")); R_ShowMessage(msg); p = "X11"; } } if(!strcmp(p, "none")) useX11 = FALSE; // not allowed from R.sh #ifdef HAVE_AQUA else if(!strcmp(p, "aqua")) useaqua = TRUE; // not allowed from R.sh but used by R.app #endif else if(!strcmp(p, "X11") || !strcmp(p, "x11")) useX11 = TRUE; else if(!strcmp(p, "Tk") || !strcmp(p, "tk")) useTk = TRUE; else { #ifdef HAVE_X11 snprintf(msg, 1024, _("WARNING: unknown gui '%s', using X11\n"), p); #else snprintf(msg, 1024, _("WARNING: unknown gui '%s', using none\n"), p); #endif R_ShowMessage(msg); } /* now remove it/them */ for(j = i; j < ac - ioff; j++) av[j] = av[j + ioff]; ac -= ioff; break; } } #ifdef HAVE_X11 if(useX11) R_GUIType = "X11"; #endif /* HAVE_X11 */ #ifdef HAVE_AQUA if(useaqua) R_GUIType = "AQUA"; #endif #ifdef HAVE_TCLTK if(useTk) R_GUIType = "Tk"; #endif R_common_command_line(&ac, av, Rp); while (--ac) { if (**++av == '-') { if(!strcmp(*av, "--no-readline")) { UsingReadline = FALSE; } else if(!strcmp(*av, "-f")) { ac--; av++; #define R_INIT_TREAT_F(_AV_) \ Rp->R_Interactive = FALSE; \ if(strcmp(_AV_, "-")) { \ if(strlen(_AV_) >= R_PATH_MAX) { \ snprintf(msg, 1024, \ _("path given in -f/--file is too long")); \ R_Suicide(msg); \ } \ char path[R_PATH_MAX], *p = path; \ p = unescape_arg(p, _AV_); \ *p = '\0'; \ ifp = R_fopen(path, "r"); \ if(!ifp) { \ snprintf(msg, 1024, \ _("cannot open file '%s': %s"), \ path, strerror(errno)); \ R_Suicide(msg); \ } \ } R_INIT_TREAT_F(*av); } else if(!strncmp(*av, "--file=", 7)) { R_INIT_TREAT_F((*av)+7); } else if(!strcmp(*av, "-e")) { ac--; av++; Rp->R_Interactive = FALSE; if(strlen(cmdlines) + strlen(*av) + 2 <= 10000) { char *p = cmdlines+strlen(cmdlines); p = unescape_arg(p, *av); *p++ = '\n'; *p = '\0'; } else { snprintf(msg, 1024, _("WARNING: '-e %s' omitted as input is too long\n"), *av); R_ShowMessage(msg); } } else if(!strcmp(*av, "--args")) { break; } else if(!strcmp(*av, "--interactive")) { force_interactive = TRUE; break; } else { #ifdef HAVE_AQUA // r27492: in 2003 launching from 'Finder OSX' passed this if(!strncmp(*av, "-psn", 4)) break; else #endif snprintf(msg, 1024, _("WARNING: unknown option '%s'\n"), *av); R_ShowMessage(msg); } } else { snprintf(msg, 1024, _("ARGUMENT '%s' __ignored__\n"), *av); R_ShowMessage(msg); } } if(strlen(cmdlines)) { /* had at least one -e option */ size_t res; char *tm; static char ifile[R_PATH_MAX] = "\0"; int ifd; if(ifp) R_Suicide(_("cannot use -e with -f or --file")); /* tmpfile() does not respect TMPDIR on some systems (PR#17925). R_TempDir is not initialized, yet. */ tm = getenv("TMPDIR"); if (!R_isWriteableDir(tm)) { tm = getenv("TMP"); if (!R_isWriteableDir(tm)) { tm = getenv("TEMP"); if (!R_isWriteableDir(tm)) tm = "/tmp"; } } snprintf(ifile, R_PATH_MAX, "%s/Rscript%x.XXXXXX", tm, getpid()); ifd = mkstemp(ifile); if (ifd >= 0) /* -1 on error, can be 0 if stdin is closed */ ifp = fdopen(ifd, "w+"); if(!ifp) R_Suicide(_("creating temporary file for '-e' failed")); unlink(ifile); res = fwrite(cmdlines, strlen(cmdlines)+1, 1, ifp); if(res != 1) R_Suicide("fwrite error in initialize_R"); fflush(ifp); rewind(ifp); } if (ifp && Rp->SaveAction != SA_SAVE) Rp->SaveAction = SA_NOSAVE; R_SetParams(Rp); if(!Rp->NoRenviron) { process_site_Renviron(); process_user_Renviron(); /* allow for R_MAX_[VN]SIZE and R_[VN]SIZE in user/site Renviron */ R_SizeFromEnv(Rp); R_SetParams(Rp); } /* On Unix the console is a file; we just use stdio to write on it */ #ifdef HAVE_AQUA if(useaqua) R_Interactive = useaqua; else #endif R_Interactive = R_Interactive && (force_interactive || R_isatty(0)); #ifdef HAVE_AQUA /* for Aqua and non-dumb terminal use callbacks instead of connections and pretty-print warnings/errors (ESS = dumb terminal) */ if(useaqua || (R_Interactive && getenv("TERM") && strcmp(getenv("TERM"), "dumb"))) { R_Outputfile = NULL; R_Consolefile = NULL; ptr_R_WriteConsoleEx = Rstd_WriteConsoleEx; ptr_R_WriteConsole = NULL; } else { #endif R_Outputfile = stdout; R_Consolefile = stderr; #ifdef HAVE_AQUA } #endif /* * Since users' expectations for save/no-save will differ, we decided * that they should be forced to specify in the non-interactive case. */ if (!R_Interactive && Rp->SaveAction != SA_SAVE && Rp->SaveAction != SA_NOSAVE) R_Suicide(_("you must specify '--save', '--no-save' or '--vanilla'")); R_setupHistory(); if (R_RestoreHistory) Rstd_read_history(R_HistoryFile); fpu_setup(1); return(0); } /* This function can be used to open the named files in text editors. If the file does not exist then the editor should be opened to create a new file. On GUI platforms multiple files can be opened in separate editor windows, but this currently only works on Windows and Aqua. */ /* * nfile = number of files * file = array of filenames * editor = editor to be used. */ int R_EditFiles(int nfile, const char **file, const char **title, const char *editor) { char buf[1024]; if (ptr_R_EditFiles) return(ptr_R_EditFiles(nfile, file, title, editor)); if (nfile > 0) { if (nfile > 1) R_ShowMessage(_("WARNING: Only editing the first in the list of files")); if (ptr_R_EditFile) ptr_R_EditFile((char *) file[0]); else { /* Quote path if not quoted */ if (editor[0] != '"') snprintf(buf, 1024, "\"%s\" \"%s\"", editor, file[0]); else snprintf(buf, 1024, "%s \"%s\"", editor, file[0]); if (R_system(buf) == 127) warningcall(R_NilValue, _("error in running command")); } return 0; } return 1; } /* Returns the limit on the number of open files. On error or when no limit is known, returns a negative number. */ int R_GetFDLimit(void) { #if defined(HAVE_SYS_RESOURCE_H) && defined(HAVE_GETRLIMIT) struct rlimit rlim; /* Historically this was RLIMIT_OFILE on BSD, but we require the POSIX version. Most often RLIM_INFINITY >= INT_MAX, but not on some 32-bit systems. On all current systems the limit will be at most a few thousand. Note that 'unlimited' here probably does not mean it: e.g. there is a kernel limit of OPEN_MAX on macOS. */ if (getrlimit(RLIMIT_NOFILE, &rlim) == 0) { rlim_t lim = rlim.rlim_cur; #if defined(RLIM_SAVED_CUR) && defined(RLIM_SAVED_MAX) if (lim == RLIM_SAVED_CUR || lim == RLIM_SAVED_MAX) lim = RLIM_INFINITY; #endif return (int)((lim > INT_MAX) ? INT_MAX : lim); } #endif return -1; } /* Tries to ensure that the limit on the number of open files is at least as desired. Returns 'desired' if successful, otherwise a smaller positive number giving the current limit. On error (no limit known), a negative number is returned. */ int R_EnsureFDLimit(int desired) { #if defined(HAVE_SYS_RESOURCE_H) && defined(HAVE_SETRLIMIT) && defined(HAVE_GETRLIMIT) struct rlimit rlim; if (getrlimit(RLIMIT_NOFILE, &rlim)) return -1; rlim_t lim = rlim.rlim_cur; #if defined(RLIM_SAVED_CUR) && defined(RLIM_SAVED_MAX) if (lim == RLIM_SAVED_CUR || lim == RLIM_SAVED_MAX) lim = RLIM_INFINITY; #endif if (lim == RLIM_INFINITY || lim >= desired) return desired; /* increase the limit */ rlim_t hlim = rlim.rlim_max; #if defined(RLIM_SAVED_CUR) && defined(RLIM_SAVED_MAX) if (hlim == RLIM_SAVED_CUR || hlim == RLIM_SAVED_MAX) hlim = RLIM_INFINITY; #endif if (hlim == RLIM_INFINITY || hlim >= desired) rlim.rlim_cur = (rlim_t) desired; else rlim.rlim_cur = hlim; if (setrlimit(RLIMIT_NOFILE, &rlim)) return (int) lim; /* also could return error */ return (int) rlim.rlim_cur; #else return -1; #endif }