#!/bin/sh # # ${R_HOME}/bin/build revision='$Revision: 1.20 $' version=`set - ${revision}; echo ${2}` version="R package builder ${version} Copyright (C) 2000 R Development Core Team. There is NO warranty. You may redistribute this software under the terms of the GNU General Public License. For more information about these matters, see the files named COPYING." usage="Usage: R CMD build [options] pkgdirs Build R packages from package sources in the directories specified by pkgdirs. A variety of diagnostic checks and cleanups are performed prior to building the packages. If necessary for passing the checks, use the \`--vsize' and \`--nsize' options to increase R's memory (\`--vanilla' is used by default). Options: -d, --debug turn on shell debugging (set -x) -h, --help print short help message and exit -v, --version print version info and exit --vsize=N set R's vector heap size to N bytes --nsize=N set R's number of cons cells to N --force force overwriting of (index) files Email bug reports to ." R_opts="--vanilla" debug=false force=false pkgs= ## Parse argument command line while test -n "${1}"; do case ${1} in -h|--help) echo "${usage}"; exit 0 ;; -v|--version) echo "${version}"; exit 0 ;; -d|--debug) debug=true ;; --force) force=true ;; --nsize=*) R_opts="{R_opts} ${1}" ;; --vsize=*) R_opts="{R_opts} ${1}" ;; *) pkgs="${pkgs} ${1}" ;; esac shift done start_dir=`pwd` stars="*" ## Determine whether echo can suppress newlines. if echo "testing\c" | grep c >/dev/null; then if echo -n "testing" | sed s/-n/xn/ | grep xn >/dev/null; then ECHO_N= ECHO_C= ECHO_T=' ' else ECHO_N=-n ECHO_C= ECHO_T= fi else ECHO_N= ECHO_C='\c' ECHO_T= fi ## A few useful output functions checking () { if ${debug}; then echo "${stars} checking $@ ..." else echo ${ECHO_N} "${stars} checking $@ ...${ECHO_C}" fi } creating () { echo ${ECHO_N} "${stars} creating $@ ...${ECHO_C}"; } message () { echo "${stars} $@"; } result () { echo "${ECHO_T} $@"; } ## Get one field including all continuation lines from a DCF file get_dcf_field () { ws="[ ]" # space and tab sed -n "/^${1}:/,/^[^ ]/{p;}" ${2} | \ sed -n "/^${1}:/{s/^${1}:${ws}*//;p;} /^${ws}/{s/^${ws}*//;p;}" } ## For updating `INDEX' and `data/00Index' updateIndex () { oldindex=${1} newindex=${TMPDIR:-/tmp}/Rbuild${$} ${R_HOME}/bin/Rdindex ${Rdfiles} > ${newindex} if diff -b ${newindex} ${oldindex} > /dev/null; then result "OK" else result "NO" if ${force}; then echo "overwriting \`${oldindex}' as \`--force' was given" cp ${newindex} ${oldindex} else echo "use \`--force' to overwrite the existing \`${oldindex}'" fi fi rm -f ${newindex} } ## For updating `TITLE' updateTitle () { oldtitle=TITLE newtitle=${TMPDIR:-/tmp}/Rbuild${$} ${R_HOME}/bin/maketitle > ${newtitle} foo=`cat TITLE` package=`set - ${foo}; echo ${1}` title=`set - ${foo}; shift; echo ${*}` if test "${package}" != "${1}"; then if ${force}; then result "NO" echo "overwriting \`${oldtitle} as \`--force' was given" cp ${newtitle} ${oldtitle} else result "ERROR: package names do not match" echo "use \`--force' to overwrite the existing \`${oldtitle}'" exit 1 fi elif diff -b ${newtitle} ${oldtitle} > /dev/null; then result "OK" else result "NO" if ${force}; then echo "overwriting \`${oldtitle} as \`--force' was given" cp ${newtitle} ${oldtitle} else echo "use \`--force' to overwrite the existing \`${oldtitle}'" fi fi rm -f ${newtitle} } ## Initial checks checkdir () { cd ${start_dir} checking "package dir" if test -d ${1}; then dir=`cd ${1}; pwd` else result "ERROR: package dir \`${1}' does not exist" exit 1 fi result "OK" ## Check whether `DESCRIPTION' exists and contains required fields checking "for \`DESCRIPTION'" if test -r ${dir}/DESCRIPTION; then : else result "ERROR: file \`DESCRIPTION' not found" exit 1 fi result "OK" checking "\`DESCRIPTION' license entry" license=`get_dcf_field License ${dir}/DESCRIPTION` if test -z "${license}"; then result "ERROR: no license entry in \`DESCRIPTION'" exit 1 fi result "OK" checking "\`DESCRIPTION' version entry" foo=`grep "^Version" ${dir}/DESCRIPTION` version=`set - ${foo}; echo ${2}` if test -z "${version}"; then result "ERROR: no version entry in \`DESCRIPTION'" exit 1 fi result "OK" } ## The work horse checkpkg () { cd ${start_dir} if ${is_bundle}; then ## If this package is part of a bundle, we need to make sure the ## directory exists and contains a `DESCRIPTION.in' file. ## Note that this code repeats the first two tests in checkdir(). checking "package dir" if test -d ${1}; then dir=`cd ${1}; pwd` else result "ERROR: package dir \`${1}' does not exist" exit 1 fi result "OK" description=DESCRIPTION.in checking "for \`${description}'" if test -r ${dir}/${description}; then : else result "ERROR: file \`${description}' not found" exit 1 fi result "OK" else dir=`cd ${1}; pwd` description=DESCRIPTION fi cd ${dir} checking "\`${description}' package entry" package=`get_dcf_field Package ${description}` if test -z "${package}"; then result "ERROR: no package entry in \`${description}'" exit 1 fi if test "${package}" != `basename ${dir}`; then result "ERROR: package field in \`${description}' differs from dir name" exit 1 fi result "OK" ## Check for title entry and/or `TITLE' checking "\`${description}' title entry" title=`get_dcf_field Title ${description}` if test -z "${title}"; then result "WARNING: no title entry in \`${description}'" else result "OK" fi checking "for \`TITLE'" if test -r TITLE; then result "OK" if test -n "${title}"; then checking "whether \`TITLE' is up-to-date" updateTitle "${package}" fi else result "NO" if test -n "${title}"; then creating "\`TITLE' from \`${description}' title entry" ${R_HOME}/bin/maketitle > TITLE if test ${?} -ne 0; then result "ERROR" exit 1 else result "OK" fi else result "ERROR: no \`TITLE' and no \`${description}' title entry" exit 1 fi fi ## Check R documentation files if test -d man; then checking "Rd files" all_file=${TMPDIR:-/tmp}/Rall${$} tag_file=${TMPDIR:-/tmp}/Rtag${$} rm -f ${all_file} 2>/dev/null find man -name "*.[Rr]d" -print | sort > ${all_file} Rdfiles=`cat ${all_file}` if test -n "${Rdfiles}"; then badfiles=`grep "<" ${all_file}` if test -n "${badfiles}"; then result "ERROR" echo "Cannot handle Rd file names containing \`<'." echo "These are not legal file names on all R platforms." echo "Please rename the following files and try again." echo "${badfiles}" exit 1 fi any= for tag in name alias title description keyword; do rm -f ${tag_file} 2>/dev/null grep -l "^\\\\${tag}" ${Rdfiles} > ${tag_file} 2>/dev/null badfiles=`comm -2 -3 ${all_file} ${tag_file}` if test -n "${badfiles}"; then if test -z "${any}"; then result "WARNING:" fi any="${any} ${tag}" echo "Rd files without \`${tag}':" echo "${badfiles}" fi done for tag in name title description usage arguments format details \ value references source seealso examples note author \ synopsis; do rm -f ${tag_file} 2>/dev/null pattern="^\\\\${tag}" for f in ${Rdfiles}; do count=`grep ${pattern} ${f} | wc -l` if test ${count} -gt 1; then echo ${f} >> ${tag_file} fi done if test -f ${tag_file}; then if test -z "${any}"; then result "WARNING:" fi any="${any} ${tag}" echo "Rd files with duplicate \`${tag}':" cat ${tag_file} fi done if test -z "${any}"; then result "OK" fi else result "WARNING: no Rd files found" fi rm -f ${all_file} ${tag_file} 2>/dev/null fi ## Check for `INDEX' checking "for \`INDEX'" if test -r INDEX; then result "OK" if test -n "${Rdfiles}"; then checking "whether \`INDEX' is up-to-date" updateIndex "INDEX" fi else result "NO" if test -n "${Rdfiles}"; then creating "\`INDEX' from Rd files" ${R_HOME}/bin/Rdindex ${Rdfiles} > INDEX if test ${?} -ne 0; then result "ERROR" exit 1 else result "OK" fi else result "ERROR: no \`INDEX' and no Rd files found." exit 1 fi fi ## Update `data/00Index' if test -d data; then if test -n "${Rdfiles}"; then Rdfiles=`grep -l "\\\\keyword{datasets}" ${Rdfiles}` fi checking "for \`data/00Index'" if test -r data/00Index; then result "OK" if test -n "${Rdfiles}"; then checking "whether \`data/00Index' is up-to-date" updateIndex "data/00Index" fi else result "NO" if test -n "${Rdfiles}"; then creating "\`data/00Index' from Rd files" ${R_HOME}/bin/Rdindex ${Rdfiles} > data/00Index if test ${?} -ne 0; then result "ERROR" exit 1 else result "OK" fi else result "ERROR: no \`data/00Index' and no Rd files found." exit 1 fi fi fi ## Check for undocumented objects if test -d R -a -d man; then checking "for undocumented objects" out=`echo "undoc(dir = \"${dir}\")" \ | ${R_HOME}/bin/R.bin ${R_opts}` err=`echo "${out}" | grep "^Error"` out=`echo "${out}" | grep "^ *\\["` if test -z "${err}"; then if test -n "${out}"; then result "WARNING:" echo "${out}" else result "OK" fi else err=`echo "${err}" | sed -e 's/^Error *//'` result "ERROR:" echo "${err}" exit 1 fi fi ## Clean up `src' if test -d src; then message "cleaning \`src'" if test -r src/Makefile; then (cd src && make clean) else rm -f src/*.o src/*.s[lo] fi fi ## Other cleanups if test -x cleanup; then message "running \`cleanup'" ./cleanup fi } buildpkg () { cd ${start_dir}/${1} ## Final cleanups for f in .Rdata .Rhistory; do junk=`find . -name ${f}` if test -n "${junk}"; then message "removing left-over \`${f}' files" rm -f ${junk} fi done ## And finally build the package (bundle) cd .. package=`basename ${1}` exclude_file=${TMPDIR:-/tmp}/Rbuild${$} rm -f ${exclude_file} 2>/dev/null \ || (echo "cannot create file with exclude patterns" && exit 2) find ${package} -type d -name check >> ${exclude_file} find ${package} -type d -name '*[Oo]ld' >> ${exclude_file} find ${package} -name GNUMakefile >> ${exclude_file} find ${package} -name CVS >> ${exclude_file} find ${package} -name \*~ >> ${exclude_file} message "building \`${start_dir}/${package}_${version}.tar.gz'" tar chfX - ${exclude_file} ${package} | \ gzip -c9 > ${start_dir}/${package}_${version}.tar.gz rm -f ${exclude_file} } ## The main loop if ${debug}; then set -x; fi for p in ${pkgs}; do echo "Building package \`${p}'" checkdir ${p} if grep "^Contains" ${p}/DESCRIPTION >/dev/null; then echo "Looks like \`${p}' is a package bundle" is_bundle=true bundlepkgs=`get_dcf_field Contains ${p}/DESCRIPTION` for pp in ${bundlepkgs}; do message "checking package \`${pp}' in bundle \`${p}'" stars="**" checkpkg ${p}/${pp} stars="*" done else is_bundle=false checkpkg ${p} fi buildpkg ${p} echo done ### Local Variables: *** ### mode: sh *** ### sh-indentation: 2 *** ### End: ***