R.bib

@BOOK{R:Becker+Chambers+Wilks:1988,
  AUTHOR = {Richard A. Becker and John M. Chambers and Allan
                  R. Wilks},
  TITLE = {The New {S} Language},
  PUBLISHER = {Chapman \& Hall},
  YEAR = 1988,
  ADDRESS = {London},
  ABSTRACT = {This book is often called the ``\emph{Blue Book}'',
                  and introduced what is now known as S version 2.}
}
@BOOK{R:Chambers+Hastie:1992,
  AUTHOR = {John M. Chambers and Trevor J. Hastie},
  TITLE = {Statistical Models in {S}},
  PUBLISHER = {Chapman \& Hall},
  YEAR = 1992,
  ADDRESS = {London},
  PUBLISHERURL = {http://www.crcpress.com/shopping_cart/products/product_detail.asp?sku=C3040&parent_id=&pc=},
  ABSTRACT = {This is also called the ``\emph{White Book}'', and
                  introduced S version 3, which added structures to
                  facilitate statistical modeling in S.}
}
@BOOK{R:Chambers:1998,
  AUTHOR = {John M. Chambers},
  TITLE = {Programming with Data},
  PUBLISHER = {Springer},
  YEAR = 1998,
  ADDRESS = {New York},
  NOTE = {ISBN 0-387-98503-4},
  URL = {http://cm.bell-labs.com/cm/ms/departments/sia/Sbook/},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-40109-22-2008951-0,00.html},
  ABSTRACT = {This ``\emph{Green Book}'' describes version 4 of S, a
                  major revision of S designed by John Chambers to
                  improve its usefulness at every stage of the
                  programming process.}
}
@BOOK{R:Venables+Ripley:2002,
  AUTHOR = {William N. Venables and Brian D. Ripley},
  TITLE = {Modern Applied Statistics with {S}. Fourth Edition},
  PUBLISHER = {Springer},
  YEAR = 2002,
  NOTE = {ISBN 0-387-95457-0},
  URL = {http://www.stats.ox.ac.uk/pub/MASS4/},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-40109-22-1542120-0,00.html},
  ABSTRACT = {A highly recommended book on how to do statistical
                  data analysis using R or S-Plus. In the first chapters
                  it gives an introduction to the S language. Then it
                  covers a wide range of statistical methodology,
                  including linear and generalized linear models,
                  non-linear and smooth regression, tree-based methods,
                  random and mixed effects, exploratory multivariate
                  analysis, classification, survival analysis, time
                  series analysis, spatial statistics, and
                  optimization. The `on-line complements' available at
                  the books homepage provide updates of the book, as
                  well as further details of technical material. }
}
@BOOK{R:Venables+Ripley:2000,
  AUTHOR = {William N. Venables and Brian D. Ripley},
  TITLE = {S Programming},
  PUBLISHER = {Springer},
  YEAR = 2000,
  NOTE = {ISBN 0-387-98966-8},
  URL = {http://www.stats.ox.ac.uk/pub/MASS3/Sprog/},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-40109-22-2104231-0,00.html},
  ABSTRACT = {This provides an in-depth guide to writing software in
                  the S language which forms the basis of both the
                  commercial S-Plus and the Open Source R data analysis
                  software systems.}
}
@BOOK{R:Nolan+Speed:2000,
  AUTHOR = {Deborah Nolan and Terry Speed},
  TITLE = {Stat Labs: Mathematical Statistics Through
                  Applications},
  PUBLISHER = {Springer},
  YEAR = 2000,
  SERIES = {Springer Texts in Statistics},
  NOTE = {ISBN 0-387-98974-9},
  URL = {http://www.stat.Berkeley.EDU/users/statlabs/},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-40106-22-2104508-0,00.html?changeHeader=true},
  ABSTRACT = {Integrates theory of statistics with the practice of
                  statistics through a collection of case studies
                  (``labs''), and uses R to analyze the data.}
}
@BOOK{R:Pinheiro+Bates:2000,
  AUTHOR = {Jose C. Pinheiro and Douglas M. Bates},
  TITLE = {Mixed-Effects Models in S and {S-Plus}},
  PUBLISHER = {Springer},
  YEAR = 2000,
  NOTE = {ISBN 0-387-98957-0},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-10129-22-2102822-0,00.html?changeHeader=true},
  ABSTRACT = {A comprehensive guide to the use of the `nlme' package
                  for linear and nonlinear mixed-effects models.}
}
@BOOK{R:Limas+Mere+Juez:2001,
  AUTHOR = {Manuel Castej{\'o}n Limas and Joaqu{\'\i}n Ordieres
                  Mer{\'e} and Fco. Javier de Cos Juez and Fco. Javier
                  Mart{\'\i}nez de Pis{\'o}n Ascacibar},
  TITLE = {Control de Calidad. Metodologia para el analisis
                  previo a la modelizaci{\'o}n de datos en procesos
                  industriales. Fundamentos te{\'o}ricos y
                  aplicaciones con R.},
  PUBLISHER = {Servicio de Publicaciones de la Universidad de La
                  Rioja},
  YEAR = 2001,
  NOTE = {ISBN 84-95301-48-2},
  ABSTRACT = {This book, written in Spanish, is oriented to
                  researchers interested in applying multivariate
                  analysis techniques to real processes. It combines
                  the theoretical basis with applied examples coded in
                  R.}
}
@BOOK{R:Fox:2002,
  AUTHOR = {John Fox},
  TITLE = {An {R} and {S-Plus} Companion to Applied Regression},
  PUBLISHER = {Sage Publications},
  YEAR = 2002,
  ADDRESS = {Thousand Oaks, CA, USA},
  NOTE = {ISBN 0761922792},
  URL = {http://www.socsci.mcmaster.ca/jfox/Books/Companion/},
  ABSTRACT = {A companion book to a text or course on applied
                  regression (such as ``Applied Regression, Linear
                  Models, and Related Methods'' by the same
                  author). It introduces S, and concentrates on how to
                  use linear and generalized-linear models in S while
                  assuming familiarity with the statistical
                  methodology.}
}
@BOOK{R:Dalgaard:2002,
  AUTHOR = {Peter Dalgaard},
  TITLE = {Introductory Statistics with {R}},
  YEAR = 2002,
  PUBLISHER = {Springer},
  NOTE = {ISBN 0-387-95475-9},
  PAGES = 288,
  URL = {http://www.biostat.ku.dk/~pd/ISwR.html},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-10130-22-2287329-0,00.html?changeHeader=true}
}
@BOOK{R:Iacus+Masarotto:2003,
  AUTHOR = {Stefano Iacus and Guido Masarotto},
  TITLE = {Laboratorio di statistica con {R}},
  YEAR = 2003,
  PUBLISHER = {McGraw-Hill},
  ADDRESS = {Milano},
  NOTE = {ISBN 88-386-6084-0},
  PAGES = 384,
  PUBLISHERURL = {http://www.ateneonline.it/LibroAteneo.asp?item_id=1436}
}
@BOOK{R:Maindonald+Braun:2003,
  AUTHOR = {John Maindonald and John Braun},
  TITLE = {Data Analysis and Graphics Using R},
  YEAR = 2003,
  PUBLISHER = {Cambridge University Press},
  ADDRESS = {Cambridge},
  NOTE = {ISBN 0-521-81336-0},
  PAGES = 362,
  URL = {http://wwwmaths.anu.edu.au/~johnm/r-book.html},
  PUBLISHERURL = {http://www.cup.org/}
}
@BOOK{R:Parmigiani+Garrett+Irizarry+Zeger:2003,
  AUTHOR = {Giovanni Parmigiani and Elizabeth S. Garrett and
                  Rafael A. Irizarry and Scott L. Zeger},
  TITLE = {The Analysis of Gene Expression Data},
  PUBLISHER = {Springer},
  YEAR = 2003,
  ADDRESS = {New York},
  NOTE = {ISBN 0-387-95577-1},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-40109-22-2292983-0,00.html}
}
@BOOK{R:Huet+Bouvier+Gruet+Jolivet:2003,
  AUTHOR = {Sylvie Huet and Annie Bouvier and Marie-Anne Gruet and
                  Emmanuel Jolivet},
  TITLE = {Statistical Tools for Nonlinear Regression},
  PUBLISHER = {Springer},
  YEAR = 2003,
  ADDRESS = {New York},
  NOTE = {ISBN 0-387-40081-8},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-40109-22-7107970-0,00.html}
}
@BOOK{R:Mase+Kamakura+Jimbo:2004,
  AUTHOR = {S. Mase and T. Kamakura and M. Jimbo and K. Kanefuji},
  TITLE = {Introduction to Data Science for engineers--- Data
                  analysis using free statistical software R (in
                  Japanese)},
  PUBLISHER = {Suuri-Kogaku-sha, Tokyo},
  YEAR = 2004,
  MONTH = {April},
  NOTE = {ISBN 4901683128},
  PAGES = 254
}
@BOOK{R:Faraway:2004,
  AUTHOR = {Julian J. Faraway},
  TITLE = {Linear Models with R},
  PUBLISHER = {Chapman \& Hall/CRC},
  YEAR = 2004,
  ADDRESS = {Boca Raton, FL},
  NOTE = {ISBN 1-584-88425-8},
  URL = {http://www.stat.lsa.umich.edu/~faraway/LMR/},
  PUBLISHERURL = {http://www.crcpress.com/shopping_cart/products/product_detail.asp?sku=C4258&parent_id=&pc=},
  ABSTRACT = {The first book that directly uses R to teach data
                  analysis, Linear Models with R focuses on the practice
                  of regression and analysis of variance. It clearly
                  demonstrates the different methods available and in
                  which situations each one applies. It covers all of
                  the standard topics, from the basics of estimation to
                  missing data, factorial designs, and block designs,
                  but it also includes discussion of topics, such as
                  model uncertainty, rarely addressed in books of this
                  type. The presentation incorporates an abundance of
                  examples that clarify both the use of each technique
                  and the conclusions one can draw from the results.}
}
@BOOK{R:Heiberger+Holland:2004,
  AUTHOR = {Richard M. Heiberger and Burt Holland},
  TITLE = {Statistical Analysis and Data Display: An Intermediate
                  Course with Examples in {S-Plus}, {R}, and {SAS}},
  PUBLISHER = {Springer},
  YEAR = 2004,
  SERIES = {Springer Texts in Statistics},
  NOTE = {ISBN 0-387-40270-5},
  URL = {http://astro.temple.edu/~rmh/HH},
  ABSTRACT = {A contemporary presentation of statistical methods
                  featuring 200 graphical displays for exploring data
                  and displaying analyses. Many of the displays appear
                  here for the first time. Discusses construction and
                  interpretation of graphs, principles of graphical
                  design, and relation between graphs and traditional
                  tabular results. Can serve as a graduate-level
                  standalone statistics text and as a reference book for
                  researchers. In-depth discussions of regression
                  analysis, analysis of variance, and design of
                  experiments are followed by introductions to analysis
                  of discrete bivariate data, nonparametrics, logistic
                  regression, and ARIMA time series modeling. Concepts
                  and techniques are illustrated with a variety of case
                  studies. S-Plus, R, and SAS executable functions are
                  provided and discussed. S functions are provided for
                  each new graphical display format. All code,
                  transcript and figure files are provided for readers
                  to use as templates for their own analyses.},
  PUBLISHERURL = {http://www.springeronline.com/sgw/cda/frontpage/0,11855,4-10129-22-28904982-0,00.html?changeHeader=true}
}
@BOOK{R:Verzani:2005,
  AUTHOR = {John Verzani},
  TITLE = {Using R for Introductory Statistics},
  PUBLISHER = {Chapman \& Hall/CRC},
  YEAR = 2005,
  ADDRESS = {Boca Raton, FL},
  NOTE = {ISBN 1-584-88450-9},
  URL = {http://wiener.math.csi.cuny.edu/UsingR/},
  PUBLISHERURL = {http://www.crcpress.com/shopping_cart/products/product_detail.asp?sku=C4509&parent_id=&pc=},
  ABSTRACT = {There are few books covering introductory statistics
                  using R, and this book fills a gap as a true
                  ``beginner'' book. With emphasis on data analysis and
                  practical examples, `Using R for Introductory
                  Statistics' encourages understanding rather than
                  focusing on learning the underlying theory. It
                  includes a large collection of exercises and numerous
                  practical examples from a broad range of scientific
                  disciplines. It comes complete with an online resource
                  containing datasets, R functions, selected solutions
                  to exercises, and updates to the latest features. A
                  full solutions manual is available from Chapman \&
                  Hall/CRC.}
}
@COMMENT{{-----------------end-of-books------------------------------------}}
@ARTICLE{R:Ihaka+Gentleman:1996,
  AUTHOR = {Ross Ihaka and Robert Gentleman},
  TITLE = {R: A Language for Data Analysis and Graphics},
  JOURNAL = {Journal of Computational and Graphical Statistics},
  YEAR = 1996,
  VOLUME = 5,
  NUMBER = 3,
  PAGES = {299--314},
  URL = {http://www.amstat.org/publications/jcgs/}
}
@ARTICLE{R:Cribari-Neto+Zarkos:1999,
  AUTHOR = {Francisco Cribari-Neto and Spyros G. Zarkos},
  TITLE = {{R}: Yet another econometric programming
                  environment},
  JOURNAL = {Journal of Applied Econometrics},
  YEAR = 1999,
  VOLUME = 14,
  PAGES = {319-329},
  URL = {http://www.interscience.wiley.com/jpages/0883-7252/},
  PDF = {http://www.R-project.org/nosvn/papers/Cribari-Neto+Zarkos:1999.pdf}
}
@ARTICLE{R:Gentleman+Ihaka:2000,
  AUTHOR = {Robert Gentleman and Ross Ihaka},
  TITLE = {Lexical Scope and Statistical Computing},
  JOURNAL = {Journal of Computational and Graphical Statistics},
  YEAR = 2000,
  VOLUME = 9,
  PAGES = {491--508},
  URL = {http://www.amstat.org/publications/jcgs/}
}
@ARTICLE{R:Murrell+Ihaka:2000,
  AUTHOR = {Paul Murrell and Ross Ihaka},
  TITLE = {An Approach to Providing Mathematical Annotation in
                  Plots},
  JOURNAL = {Journal of Computational and Graphical Statistics},
  YEAR = 2000,
  VOLUME = 9,
  PAGES = {582--599},
  URL = {http://www.amstat.org/publications/jcgs/}
}
@ARTICLE{R:Ellner:2001,
  AUTHOR = {Stephen P. Ellner},
  TITLE = {Review of {R}, Version 1.1.1},
  JOURNAL = {Bulletin of the Ecological Society of America},
  YEAR = 2001,
  VOLUME = 82,
  NUMBER = 2,
  PAGES = {127--128},
  MONTH = {April}
}
@ARTICLE{R:Ripley:2001,
  AUTHOR = {Brian D. Ripley},
  TITLE = {The {R} Project in Statistical Computing},
  JOURNAL = {MSOR Connections. The newsletter of the LTSN Maths,
                  Stats \& OR Network.},
  YEAR = 2001,
  VOLUME = 1,
  NUMBER = 1,
  PAGES = {23--25},
  MONTH = {February},
  URL = {http://ltsn.mathstore.ac.uk/newsletter/feb2001/pdf/rproject.pdf}
}
@PROCEEDINGS{R:Hornik+Leisch:2001,
  TITLE = {Proceedings of the 2nd International Workshop on
                  Distributed Statistical Computing (DSC 2001)},
  YEAR = 2001,
  EDITOR = {Kurt Hornik and Friedrich Leisch},
  ADDRESS = {Technische Universit{\"a}t Wien, Vienna, Austria},
  URL = {http://www.ci.tuwien.ac.at/Conferences/DSC.html},
  NOTE = {ISSN 1609-395X}
}
@ARTICLE{R:Ribeiro+Brown:2001,
  AUTHOR = {Ribeiro, Jr., Paulo J. and Patrick E. Brown},
  TITLE = {Some words on the R project},
  JOURNAL = {The ISBA Bulletin},
  YEAR = 2001,
  VOLUME = 8,
  NUMBER = 1,
  PAGES = {12--16},
  MONTH = {March},
  URL = {http://www.iami.mi.cnr.it/isba/index.html}
}
@ARTICLE{R:Kuonen:2001,
  AUTHOR = {Diego Kuonen},
  TITLE = {Introduction au data mining avec {R} : vers la
                  reconqu{\^e}te du `knowledge discovery in databases' par
                  les statisticiens},
  JOURNAL = {Bulletin of the Swiss Statistical Society},
  YEAR = 2001,
  VOLUME = 40,
  PAGES = {3-7},
  URL = {http://www.statoo.com/en/publications/2001.R.SSS.40/}
}
@ARTICLE{R:Kuonen+Furrer:2001,
  AUTHOR = {Diego Kuonen and Reinhard Furrer},
  TITLE = {Data mining avec {R} dans un monde libre},
  JOURNAL = {Flash Informatique Sp{\'e}cial {\'E}t{\'e}},
  YEAR = 2001,
  PAGES = {45-50},
  MONTH = {sep},
  URL = {http://sawww.epfl.ch/SIC/SA/publications/FI01/fi-sp-1/sp-1-page45.html}
}
@ARTICLE{R:Furrer+Kuonen:2001,
  AUTHOR = {Reinhard Furrer and Diego Kuonen},
  TITLE = {{GRASS GIS et R}: main dans la main dans un monde
                  libre},
  JOURNAL = {Flash Informatique Sp{\'e}cial {\'E}t{\'e}},
  YEAR = 2001,
  PAGES = {51-56},
  MONTH = {sep},
  URL = {http://sawww.epfl.ch/SIC/SA/publications/FI01/fi-sp-1/sp-1-page51.html}
}
@ARTICLE{R:Kuonen+Chavez:2001,
  AUTHOR = {Diego Kuonen and Valerie Chavez},
  TITLE = {{R} - un exemple du succ{\`e}s des mod{\`e}les libres},
  JOURNAL = {Flash Informatique},
  YEAR = 2001,
  VOLUME = 2,
  PAGES = {3-7},
  URL = {http://sawww.epfl.ch/SIC/SA/publications/FI01/fi-2-1/2-1-page3.html}
}
@ARTICLE{R:Ricci:2004,
  AUTHOR = {Vito Ricci},
  TITLE = {{R} : un ambiente opensource per l'analisi statistica
                  dei dati},
  JOURNAL = {Economia e Commercio},
  YEAR = 2004,
  VOLUME = 1,
  PAGES = {69--82},
  ABSTRACT = {This paper would be a short introduction and overview
                  about the language and environment for statistical
                  analysis R, without entering in specific details too
                  much computational. I give a look about this
                  opensource software pointing out its main features,
                  its functionalities, its pros and cons describing some
                  libraries and the kind of analysis they support. I
                  supply a summary, with a short description, about many
                  resources concerning R that can be found in the Web:
                  the most are in English language, but there are also
                  some in the Italian language. The aim of this work is
                  to contribute in increasing of the use of the R
                  environment in Italy among statistical researchers
                  trying to ``advertise'' this software and its
                  opensource philosophy.}
}

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