R version 2.4.0 beta (2006-09-25 r39510) Copyright (C) 2006 The R Foundation for Statistical Computing ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(mlmRev) Loading required package: lme4 Loading required package: Matrix Loading required package: lattice > options(show.signif.stars = FALSE) > (fm <- lmer(immun ~ kid2p + mom25p + ord + ethn + momEd + + husEd + momWork + rural + pcInd81 + (1|mom) + (1|comm), + guImmun, family = binomial)) Generalized linear mixed model fit using PQL Formula: immun ~ kid2p + mom25p + ord + ethn + momEd + husEd + momWork + rural + pcInd81 + (1 | mom) + (1 | comm) Data: guImmun Family: binomial(logit link) AIC BIC logLik deviance 2855 2957 -1410 2819 Random effects: Groups Name Variance Std.Dev. mom (Intercept) 11.4292 3.3807 comm (Intercept) 1.5335 1.2384 number of obs: 2159, groups: mom, 1595; comm, 161 Estimated scale (compare to 1 ) 0.654187 Fixed effects: Estimate Std. Error z value Pr(>|z|) (Intercept) -0.95336 0.57682 -1.653 0.0984 kid2pY 1.54787 0.20583 7.520 5.48e-14 mom25pY -0.25263 0.27209 -0.928 0.3532 ord23 -0.40548 0.25972 -1.561 0.1185 ord46 -0.02675 0.34454 -0.078 0.9381 ord7p 0.29231 0.43713 0.669 0.5037 ethnN -0.14144 0.58339 -0.242 0.8084 ethnS -0.07581 0.43812 -0.173 0.8626 momEdP 0.35384 0.26997 1.311 0.1900 momEdS 0.31743 0.59185 0.536 0.5917 husEdP 0.42838 0.28174 1.520 0.1284 husEdS 0.37674 0.50693 0.743 0.4574 husEdU -0.03366 0.43850 -0.077 0.9388 momWorkY 0.32493 0.24601 1.321 0.1866 ruralY -0.72036 0.36448 -1.976 0.0481 pcInd81 -0.90566 0.60203 -1.504 0.1325 Correlation of Fixed Effects: (Intr) kid2pY mm25pY ord23 ord46 ord7p ethnN ethnS momEdP momEdS kid2pY -0.332 mom25pY -0.078 0.022 ord23 -0.326 0.075 -0.179 ord46 -0.296 0.053 -0.527 0.616 ord7p -0.272 0.078 -0.535 0.491 0.676 ethnN -0.066 -0.007 0.008 0.000 0.014 0.009 ethnS -0.072 -0.003 0.000 0.004 0.021 0.016 0.635 momEdP -0.331 0.058 0.026 0.027 0.057 0.090 0.181 0.102 momEdS -0.254 0.056 -0.020 0.075 0.111 0.114 0.124 0.134 0.372 husEdP -0.362 0.020 0.018 0.007 0.037 0.070 0.128 0.058 -0.125 -0.041 husEdS -0.300 -0.015 -0.002 0.016 0.079 0.088 0.080 0.060 -0.144 -0.422 husEdU -0.179 -0.029 -0.008 0.016 0.033 0.029 0.062 0.018 0.027 0.033 momWorkY -0.254 -0.026 -0.053 -0.030 0.010 0.024 0.136 0.095 0.018 -0.011 ruralY -0.541 0.001 0.040 0.031 0.006 -0.013 -0.054 0.043 0.009 0.121 pcInd81 -0.281 -0.006 -0.004 -0.005 -0.008 0.011 -0.619 -0.636 0.059 -0.010 husEdP husEdS husEdU mmWrkY ruralY kid2pY mom25pY ord23 ord46 ord7p ethnN ethnS momEdP momEdS husEdP husEdS 0.440 husEdU 0.359 0.201 momWorkY 0.001 -0.030 -0.024 ruralY 0.068 0.205 0.004 0.083 pcInd81 -0.027 -0.005 -0.030 0.004 0.023 > q("no")