R version 2.6.0 Under development (unstable) (2007-07-19 r42275)
Copyright (C) 2007 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> library(MEMSS)
Loading required package: lme4
Loading required package: Matrix
Loading required package: lattice
> options(show.signif.stars = FALSE)
> m1 <- lmer(pixel ~ day + I(day^2) + (1|Dog:Side) + (day|Dog),
+            Pixel, verbose = TRUE)
  0:     873.72159: 0.723102 0.511310 0.0568329  0.00000
  1:     871.66481: 0.764370 0.554128 0.265180 0.0790741
  2:     852.35724:  1.10288 0.845451 0.152962 0.106305
  3:     847.00821:  1.16858 0.874801 0.156903 -0.0635955
  4:     843.28240:  1.28977 0.977645 0.124671 0.0244869
  5:     839.18593:  1.39641  1.09187 0.170487 -0.0623405
  6:     835.37011:  1.50833  1.23109 0.141202 -0.0263486
  7:     833.06758:  1.61653  1.57809 0.163323 -0.0866536
  8:     830.85858:  1.65460  1.92406 0.257511 -0.00775361
  9:     828.14956:  1.68643  2.06574 0.192606 -0.0156699
 10:     827.81893:  1.68848  2.06928 0.181346 -0.0513314
 11:     827.28190:  1.69472  2.10191 0.175224 -0.0347777
 12:     827.01770:  1.69385  2.17357 0.153136 -0.0409097
 13:     825.44540:  1.73982  2.84022 0.175245 -0.0377087
 14:     825.34915:  1.91603  2.84723 0.174516 -0.0391935
 15:     825.30257:  1.86960  3.13923 0.165970 -0.0300228
 16:     825.21131:  1.86805  3.15373 0.170702 -0.0367435
 17:     825.21020:  1.87145  3.15345 0.170711 -0.0360659
 18:     825.21019:  1.87143  3.15557 0.170648 -0.0360493
 19:     825.21019:  1.87151  3.15584 0.170647 -0.0360509
 20:     825.21019:  1.87152  3.15586 0.170649 -0.0360511
> print(m1, corr = FALSE)
Linear mixed-effects model fit by REML 
Formula: pixel ~ day + I(day^2) + (1 | Dog:Side) + (day | Dog) 
   Data: Pixel 
   AIC   BIC logLik MLdeviance REMLdeviance
 839.2 857.6 -412.6      827.3        825.2
Random effects:
 Groups   Name Variance Std.Dev. Corr   
 Dog:Side      283.0552 16.8242         
 Dog           804.8533 28.3699         
                 3.3999  1.8439  -0.555 
 Residual       80.8131  8.9896         
Number of obs: 102, groups: Dog:Side, 20; Dog, 10

Fixed effects:
              Estimate Std. Error t value
(Intercept) 1073.33924   10.17169  105.52
day            6.12959    0.87935    6.97
I(day^2)      -0.36735    0.03395  -10.82
> ranef(m1)
$`Dog:Side`
    (Intercept)
A:L   -5.967401
A:R  -11.773452
B:L   -4.052808
B:R   -9.803955
C:L   -7.974109
C:R    3.734074
D:L    2.111162
D:R    2.852360
E:L    3.308487
E:R    7.111341
F:L   10.906578
F:R   -9.905066
G:L   -5.905193
G:R   21.116140
H:L    8.125800
H:R   -7.414967
I:L   11.172113
I:R  -17.049247
J:L   31.610151
J:R  -22.202007

$Dog
  (Intercept)         day
A  -24.713030 -1.19534746
B  -23.581267 -0.43240454
C  -27.080725  2.19479510
D  -16.659732  3.09601389
E   25.299326 -0.56128564
F   10.823465 -1.03701003
G   49.353931 -2.27452509
H   -7.054529  0.99029781
I   -5.753167 -0.68108686
J   19.365728 -0.09944718

> q("no")