\name{nsyMatrix-class} \title{Symmetric Dense Nonzero-Pattern Matrices} \docType{class} \alias{nspMatrix-class} \alias{nsyMatrix-class} % \alias{coerce,nspMatrix,dspMatrix-method} \alias{coerce,nspMatrix,nsyMatrix-method} \alias{coerce,nspMatrix,ngeMatrix-method} \alias{coerce,nsyMatrix,dsyMatrix-method} \alias{coerce,nsyMatrix,ngeMatrix-method} \alias{coerce,nsyMatrix,nspMatrix-method} \alias{coerce,matrix,nsyMatrix-method} \alias{coerce,matrix,nspMatrix-method} \alias{t,nspMatrix-method} \alias{t,nsyMatrix-method} % \description{ The \code{"nsyMatrix"} class is the class of symmetric, dense nonzero-pattern matrices in non-packed storage and \code{"nspMatrix"} is the class of of these in packed storage. Only the upper triangle or the lower triangle is stored. } \section{Objects from the Class}{ Objects can be created by calls of the form \code{new("nsyMatrix", ...)}. } \section{Slots}{ \describe{ \item{\code{uplo}:}{Object of class \code{"character"}. Must be either "U", for upper triangular, and "L", for lower triangular.} \item{\code{x}:}{Object of class \code{"logical"}. The logical values that constitute the matrix, stored in column-major order.} \item{\code{Dim},\code{Dimnames}:}{The dimension (a length-2 \code{"integer"}) and corresponding names (or \code{NULL}), see the \code{\linkS4class{Matrix}} class.} \item{\code{factors}:}{Object of class \code{"list"}. A named list of factorizations that have been computed for the matrix.} } } \section{Extends}{ \code{"nsyMatrix"} extends class \code{"ngeMatrix"}, directly, whereas\cr \code{"nspMatrix"} extends class \code{"ndenseMatrix"}, directly. Both extend class \code{"symmetricMatrix"}, directly, and class \code{"Matrix"} and others, \emph{in}directly, use \code{\link{showClass}("nsyMatrix")}, e.g., for details. } \section{Methods}{ Currently, mainly \code{\link{t}()} and coercion methods (for \code{\link{as}(.)}; use, e.g., \code{\link{showMethods}(class="dsyMatrix")} for details. } %\references{} %\author{} \seealso{ \code{\linkS4class{ngeMatrix}}, \code{\linkS4class{Matrix}}, \code{\link[base]{t}} } \examples{ (s0 <- new("nsyMatrix")) (M2 <- Matrix(c(TRUE, NA,FALSE,FALSE), 2,2)) # logical dense (ltr) (sM <- M2 & t(M2)) # "lge" class(sM <- as(sM, "nMatrix")) # -> "nge" (sM <- as(sM, "nsyMatrix")) # -> "nsy" str ( sM <- as(sM, "nspMatrix")) # -> "nsp": packed symmetric } \keyword{classes}