\name{lsyMatrix-class} \title{Symmetric Dense Logical Matrices} \docType{class} \alias{lspMatrix-class} \alias{lsyMatrix-class} % \alias{coerce,lspMatrix,dspMatrix-method} \alias{coerce,lspMatrix,lsyMatrix-method} \alias{coerce,lspMatrix,lgeMatrix-method} \alias{coerce,lsyMatrix,dsyMatrix-method} \alias{coerce,lsyMatrix,lgeMatrix-method} \alias{coerce,lsyMatrix,lspMatrix-method} \alias{coerce,matrix,lsyMatrix-method} \alias{coerce,matrix,lspMatrix-method} \alias{t,lspMatrix-method} \alias{t,lsyMatrix-method} % \description{ The \code{"lsyMatrix"} class is the class of symmetric, dense logical matrices in non-packed storage and \code{"lspMatrix"} is the class of of these in packed storage. Only the upper triangle or the lower triangle is stored. } \section{Objects from the Class}{ Objects can be created by calls of the form \code{new("lsyMatrix", ...)}. } \section{Slots}{ \describe{ \item{\code{uplo}:}{Object of class \code{"character"}. Must be either "U", for upper triangular, and "L", for lower triangular.} \item{\code{x}:}{Object of class \code{"logical"}. The logical values that constitute the matrix, stored in column-major order.} \item{\code{Dim},\code{Dimnames}:}{The dimension (a length-2 \code{"integer"}) and corresponding names (or \code{NULL}), see the \code{\linkS4class{Matrix}} class.} \item{\code{factors}:}{Object of class \code{"list"}. A named list of factorizations that have been computed for the matrix.} } } \section{Extends}{ \code{"lsyMatrix"} extends class \code{"lgeMatrix"}, directly, whereas\cr \code{"lspMatrix"} extends class \code{"ldenseMatrix"}, directly. Both extend class \code{"symmetricMatrix"}, directly, and class \code{"Matrix"} and others, \emph{in}directly, use \code{\link{showClass}("lsyMatrix")}, e.g., for details. } \section{Methods}{ Currently, mainly \code{\link{t}()} and coercion methods (for \code{\link{as}(.)}; use, e.g., \code{\link{showMethods}(class="dsyMatrix")} for details. } %\references{} %\author{} \seealso{ \code{\linkS4class{lgeMatrix}}, \code{\linkS4class{Matrix}}, \code{\link[base]{t}} } \examples{ (M2 <- Matrix(c(TRUE, NA,FALSE,FALSE), 2,2)) # logical dense (ltr) str(M2) # can (sM <- M2 | t(M2)) # "lge" as(sM, "lsyMatrix") str(sM <- as(sM, "lspMatrix")) # packed symmetric } \keyword{classes}