#### Positive-definite Symmetric Matrices -- Coercion and Methods setAs("dpoMatrix", "dppMatrix", function(from) as(as(from, "dspMatrix"), "dppMatrix")) setAs("dpoMatrix", "corMatrix", function(from) { sd <- sqrt(diag(from)) if(is.null(names(sd)) && !is.null(nms <- from@Dimnames[[1]])) names(sd) <- nms Is <- Diagonal(x = 1/sd) new("corMatrix", as(forceSymmetric(Is %*% from %*% Is), "dpoMatrix"), sd = unname(sd)) }) setAs("corMatrix", "lMatrix", function(from) as(as(from, "dpoMatrix"), "lMatrix")) to_dpo <- function(from) # not't coercing to "dsy*" explicitly: as(as(as(as(from, "symmetricMatrix"), "dMatrix"), "denseMatrix"), "dpoMatrix") setAs("Matrix", "dpoMatrix", to_dpo) setAs("matrix", "dpoMatrix", to_dpo) setMethod("chol", signature(x = "dpoMatrix"), function(x, pivot, ...) .Call(dpoMatrix_chol, x)) setMethod("rcond", signature(x = "dpoMatrix", norm = "character"), function(x, norm, ...) .Call(dpoMatrix_rcond, x, norm), valueClass = "numeric") setMethod("rcond", signature(x = "dpoMatrix", norm = "missing"), function(x, norm, ...) .Call(dpoMatrix_rcond, x, "O"), valueClass = "numeric") setMethod("solve", signature(a = "dpoMatrix", b = "missing"), function(a, b, ...) .Call(dpoMatrix_solve, a), valueClass = "dpoMatrix") setMethod("solve", signature(a = "dpoMatrix", b = "dgeMatrix"), function(a, b, ...) .Call(dpoMatrix_dgeMatrix_solve, a, b), valueClass = "dgeMatrix") setMethod("solve", signature(a = "dpoMatrix", b = "matrix"), function(a, b, ...) .Call(dpoMatrix_matrix_solve, a, b), valueClass = "matrix") ## Is this usable / necessary? -- FIXME! ## setMethod("solve", signature(a = "dpoMatrix", b = "numeric"), ## function(a, b, ...) ## as.numeric(.Call(dpoMatrix_matrix_solve, ## a, as.matrix(b))), ## valueClass = "numeric")