R-packages - Revision 8462: /branches/nlme-fix-sigma/man

• ..
• ACF.Rd
• ACF.gls.Rd
• ACF.lme.Rd
• Alfalfa.Rd
• Assay.Rd
• BodyWeight.Rd
• Cefamandole.Rd
• Coef.Rd
• Covariate.Rd
• Covariate.varFunc.Rd
• Dialyzer.Rd
• Dim.Rd
• Dim.corSpatial.Rd
• Dim.corStruct.Rd
• Dim.pdMat.Rd
• Earthquake.Rd
• Extract.pdMat.Rd
• Fatigue.Rd
• Gasoline.Rd
• Glucose.Rd
• Glucose2.Rd
• Gun.Rd
• IGF.Rd
• Initialize.Rd
• Initialize.corStruct.Rd
• Initialize.glsStruct.Rd
• Initialize.lmeStruct.Rd
• Initialize.reStruct.Rd
• Initialize.varFunc.Rd
• LDEsysMat.Rd
• Machines.Rd
• MathAchSchool.Rd
• MathAchieve.Rd
• Matrix.Rd
• Matrix.pdMat.Rd
• Matrix.reStruct.Rd
• Meat.Rd
• Milk.Rd
• Muscle.Rd
• Names.Rd
• Names.formula.Rd
• Names.pdBlocked.Rd
• Names.pdMat.Rd
• Names.reStruct.Rd
• Nitrendipene.Rd
• Oats.Rd
• Orthodont.Rd
• Ovary.Rd
• Oxboys.Rd
• Oxide.Rd
• PBG.Rd
• Phenobarb.Rd
• Pixel.Rd
• Quinidine.Rd
• Rail.Rd
• RatPupWeight.Rd
• Relaxin.Rd
• Remifentanil.Rd
• Soybean.Rd
• Spruce.Rd
• Tetracycline1.Rd
• Tetracycline2.Rd
• VarCorr.Rd
• Variogram.Rd
• Variogram.corExp.Rd
• Variogram.corGaus.Rd
• Variogram.corLin.Rd
• Variogram.corRatio.Rd
• Variogram.corSpatial.Rd
• Variogram.corSpher.Rd
• Variogram.default.Rd
• Variogram.gls.Rd
• Variogram.lme.Rd
• Wafer.Rd
• Wheat.Rd
• Wheat2.Rd
• allCoef.Rd
• anova.gls.Rd
• anova.lme.Rd
• as.matrix.corStruct.Rd
• as.matrix.pdMat.Rd
• as.matrix.reStruct.Rd
• asOneFormula.Rd
• asTable.Rd
• augPred.Rd
• balancedGrouped.Rd
• bdf.Rd
• coef.corStruct.Rd
• coef.gnls.Rd
• coef.lmList.Rd
• coef.lme.Rd
• coef.modelStruct.Rd
• coef.pdMat.Rd
• coef.reStruct.Rd
• coef.varFunc.Rd
• collapse.Rd
• collapse.groupedData.Rd
• compareFits.Rd
• comparePred.Rd
• corAR1.Rd
• corARMA.Rd
• corCAR1.Rd
• corClasses.Rd
• corCompSymm.Rd
• corExp.Rd
• corFactor.Rd
• corFactor.corStruct.Rd
• corGaus.Rd
• corLin.Rd
• corMatrix.Rd
• corMatrix.corStruct.Rd
• corMatrix.pdMat.Rd
• corMatrix.reStruct.Rd
• corNatural.Rd
• corRatio.Rd
• corSpatial.Rd
• corSpher.Rd
• corSymm.Rd
• ergoStool.Rd
• fdHess.Rd
• fitted.glsStruct.Rd
• fitted.gnlsStruct.Rd
• fitted.lmList.Rd
• fitted.lme.Rd
• fitted.lmeStruct.Rd
• fitted.nlmeStruct.Rd
• fixed.effects.Rd
• fixef.lmList.Rd
• formula.pdBlocked.Rd
• formula.pdMat.Rd
• formula.reStruct.Rd
• gapply.Rd
• getCovariate.Rd
• getCovariate.corStruct.Rd
• getCovariate.data.frame.Rd
• getCovariate.varFunc.Rd
• getCovariateFormula.Rd
• getData.Rd
• getData.gls.Rd
• getData.lmList.Rd
• getData.lme.Rd
• getGroups.Rd
• getGroups.corStruct.Rd
• getGroups.data.frame.Rd
• getGroups.gls.Rd
• getGroups.lmList.Rd
• getGroups.lme.Rd
• getGroups.varFunc.Rd
• getGroupsFormula.Rd
• getResponse.Rd
• getResponseFormula.Rd
• getVarCov.Rd
• gls-internal.Rd
• gls.Rd
• glsControl.Rd
• glsObject.Rd
• glsStruct.Rd
• gnls.Rd
• gnlsControl.Rd
• gnlsObject.Rd
• gnlsStruct.Rd
• groupedData.Rd
• gsummary.Rd
• intervals.Rd
• intervals.gls.Rd
• intervals.lmList.Rd
• intervals.lme.Rd
• isBalanced.Rd
• isInitialized.Rd
• lmList.Rd
• lmList.groupedData.Rd
• lme.Rd
• lme.groupedData.Rd
• lme.lmList.Rd
• lmeControl.Rd
• lmeObject.Rd
• lmeStruct.Rd
• logDet.Rd
• logDet.corStruct.Rd
• logDet.pdMat.Rd
• logDet.reStruct.Rd
• logLik.corStruct.Rd
• logLik.glsStruct.Rd
• logLik.gnls.Rd
• logLik.gnlsStruct.Rd
• logLik.lmList.Rd
• logLik.lme.Rd
• logLik.lmeStruct.Rd
• logLik.reStruct.Rd
• logLik.varFunc.Rd
• model.matrix.reStruct.Rd
• needUpdate.Rd
• needUpdate.modelStruct.Rd
• nlme.Rd
• nlme.nlsList.Rd
• nlmeControl.Rd
• nlmeObject.Rd
• nlmeStruct.Rd
• nlsList.Rd
• nlsList.selfStart.Rd
• pairs.compareFits.Rd
• pairs.lmList.Rd
• pairs.lme.Rd
• pdBlocked.Rd
• pdClasses.Rd
• pdCompSymm.Rd
• pdConstruct.Rd
• pdConstruct.pdBlocked.Rd
• pdDiag.Rd
• pdFactor.Rd
• pdFactor.reStruct.Rd
• pdIdent.Rd
• pdLogChol.Rd
• pdMat.Rd
• pdMatrix.Rd
• pdMatrix.reStruct.Rd
• pdNatural.Rd
• pdSymm.Rd
• phenoModel.Rd
• plot.ACF.Rd
• plot.Variogram.Rd
• plot.augPred.Rd
• plot.compareFits.Rd
• plot.gls.Rd
• plot.intervals.lmList.Rd
• plot.lmList.Rd
• plot.lme.Rd
• plot.nffGroupedData.Rd
• plot.nfnGroupedData.Rd
• plot.nmGroupedData.Rd
• plot.ranef.lmList.Rd
• plot.ranef.lme.Rd
• pooledSD.Rd
• predict.gls.Rd
• predict.gnls.Rd
• predict.lmList.Rd
• predict.lme.Rd
• predict.nlme.Rd
• print.summary.pdMat.Rd
• print.varFunc.Rd
• qqnorm.gls.Rd
• qqnorm.lme.Rd
• quinModel.Rd
• random.effects.Rd
• ranef.lmList.Rd
• ranef.lme.Rd
• reStruct.Rd
• recalc.Rd
• recalc.corStruct.Rd
• recalc.modelStruct.Rd
• recalc.reStruct.Rd
• recalc.varFunc.Rd
• residuals.gls.Rd
• residuals.glsStruct.Rd
• residuals.gnlsStruct.Rd
• residuals.lmList.Rd
• residuals.lme.Rd
• residuals.lmeStruct.Rd
• residuals.nlmeStruct.Rd
• simulate.lme.Rd
• solve.pdMat.Rd
• solve.reStruct.Rd
• splitFormula.Rd
• summary.corStruct.Rd
• summary.gls.Rd
• summary.lmList.Rd
• summary.lme.Rd
• summary.modelStruct.Rd
• summary.nlsList.Rd
• summary.pdMat.Rd
• summary.varFunc.Rd
• update.modelStruct.Rd
• update.varFunc.Rd
• varClasses.Rd
• varComb.Rd
• varConstPower.Rd
• varExp.Rd
• varFixed.Rd
• varFunc.Rd
• varIdent.Rd
• varPower.Rd
• varWeights.Rd
• varWeights.glsStruct.Rd
• varWeights.lmeStruct.Rd