# # Check out the various residuals under an Efron approximation # fit0 <- coxph(Surv(time, status)~ x, test1, iter=0) fit <- coxph(Surv(time, status) ~x, test1) fit0b <- coxph(Surv(start, stop, status) ~ x, test1b, iter=0) fitb <- coxph(Surv(start, stop, status) ~x, test1b) fitc <- coxph(Surv(time, status) ~ offset(fit$coef*x), test1) fitd <- coxph(Surv(start, stop, status) ~ offset(fit$coef*x), test1b) resid(fit0) resid(fit0b, collapse=test1b$id) resid(fit) resid(fitb, collapse=test1b$id) resid(fitc) resid(fitd, collapse=test1b$id) all.equal(resid(fitc), resid(fit)) resid(fit0, type='score') resid(fit0b, type='score', collapse=test1b$id) resid(fit, type='score') resid(fitb, type='score', collapse=test1b$id) resid(fit0, type='scho') resid(fit0b, type='scho', collapse=test1b$id) resid(fit, type='scho') resid(fitb, type='scho', collapse=test1b$id) summary(survfit(fit0, list(x=0))) summary(survfit(fit, list(x=0))) summary(survfit(fitb,list(x=0))) summary(survfit(fit))