#!/bin/csh
source ~/R/packages/common.csh
limit cputime 90m
unsetenv _R_CHECK_AUTOCONF_
unsetenv _R_CHECK_THINGS_IN_CHECK_DIR_
unsetenv _R_CHECK_THINGS_IN_TEMP_DIR_
unsetenv _R_CHECK_BASHISMS_

setenv _R_CHECK_ELAPSED_TIMEOUT_ 0
setenv _R_CHECK_INSTALL_ELAPSED_TIMEOUT_ 0

#setenv _R_CHECK_EXIT_ON_FIRST_ERROR_ true

setenv ASAN_OPTIONS detect_leaks=0
#setenv ASAN_OPTIONS 'detect_leaks=0:detect_odr_violation=0'
#setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0'
setenv UBSAN_OPTIONS 'print_stacktrace=1'

setenv RJAVA_JVM_STACK_WORKAROUND 0
setenv RGL_USE_NULL true
setenv R_DONT_USE_TK true

setenv R_LIBS ~/R/test-dev:~/R/test-BioCdata
setenv R_MAKEVARS_USER ~/.R/Makevars.70

foreach f ($*)
~/R/gcc-SAN/bin/R CMD check --extra-arch --no-stop-on-test-error $f
end