#!/bin/csh
source /data/gannet/ripley/R/packages/common.csh
setenv _R_CHECK_PKG_SIZES_ true
unsetenv _R_CHECK_COMPILATION_FLAGS_KNOWN_
setenv _R_CHECK_CODE_ASSIGN_TO_GLOBALENV_ true
setenv _R_CHECK_CODE_DATA_INTO_GLOBALENV_ true

setenv _R_CHECK_COMPILATION_FLAGS_KNOWN_ -Wno-tautological-overlap-compare

setenv _R_CHECK_ORPHANED_ true
setenv _R_CHECK_EXCESSIVE_IMPORTS_ 20

setenv JAGS_LIB /usr/local/clang/lib64
setenv PKG_CONFIG_PATH /usr/local/clang/lib64/pkgconfig:/usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig
set path=(/usr/local/clang/bin $path)

nohup make -j30 -k check >&! check_log