#! /bin/csh
~/R/packages/InUse.R ~/R/packages/tests || exit 1

set path=(~/bin /usr/local/texbin /usr/local/bin ~/bin /usr/sbin $path /usr/lib64/openmpi/bin)
setenv PKG_CONFIG_PATH /usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig

limit stacksize 20M

cd ~/R/svn/R-4-3-branch
svn up
env CRAN_RSYNC=/data/gannet/ripley/R/packages tools/rsync-recommended
cd ~/R/R-patched
make -j20
~/R/R-patched//bin/Rscript -e 'update.packages(.Library, ask = F)'
cd R/packages
~/R/packages/revdeps1 ~/R/test-pat ~/R/packages/tests/revdeps.rds
/data/gannet/ripley/R/R-patched/bin/Rscript unavailable.R
env DISPLAY=:5 /data/gannet/ripley/R/R-patched/bin/Rscript updates.R
env DISPLAY=:5 ~/R/R-patched/bin/Rscript ~/R/packages/revdeps2 ~/R/test-pat ~/R/packages/tests/revdeps.rds
rm -f ~/R/packages/tests/revdeps.rds
cd tests
make unpack
./RunScript
cat check_log