#! /bin/csh
~/R/packages/InUse.R ~/R/test-clang || exit 1
~/R/packages/InUse.R ~/R/packages/tests-clang || exit 1

set path=(~/bin /usr/local/texbin /usr/local/bin /usr/sbin $path /usr/lib64/openmpi/bin)
setenv PKG_CONFIG_PATH /usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig
cd ~/R/svn/R-devel
svn up
env CRAN_RSYNC=/data/gannet/ripley/R/packages tools/rsync-recommended
make -j20 -C ~/R/R-clang
~/R/R-clang/bin/Rscript -e 'update.packages(.Library, ask = F)'
make -j20 -C ~/R/R-flang
~/R/R-flang/bin/Rscript -e 'update.packages(.Library, ask = F)'
cd R/packages
#./update
~/R/packages/revdeps1 ~/R/test-clang ~/R/packages/tests-clang/revdeps.rds
/data/gannet/ripley/R/R-clang/bin/Rscript unavailable.R
env DISPLAY=:5 /data/gannet/ripley/R/R-clang/bin/Rscript updates.R
env DISPLAY=:5 ~/R/R-clang/bin/Rscript ~/R/packages/revdeps2 ~/R/test-clang ~/R/packages/tests-clang/revdeps.rds
rm -f ~/R/packages/tests-clang/revdeps.rds
cd tests-clang
make unpack
./RunScript
cat check_log
echo 'packaging'
make package
echo 'done'
make process