/* * Mathlib : A C Library of Special Functions * Copyright (C) 1998 Ross Ihaka * Copyright (C) 2000-12 The R Core Team * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, a copy is available at * https://www.R-project.org/Licenses/ * * SYNOPSIS * * #include * double dnbeta(double x, double a, double b, double ncp, int give_log); * * DESCRIPTION * * Computes the density of the noncentral beta distribution with * noncentrality parameter ncp. The noncentral beta distribution * has density: * * Inf * f(x|a,b,ncp) = SUM p(i) * x^(a+i-1) * (1-x)^(b-1) / B(a+i,b) * i=0 * * where: * * p(k) = exp(-ncp/2) (ncp/2)^k / k! * * B(a,b) = Gamma(a) * Gamma(b) / Gamma(a+b) * * * This can be computed efficiently by using the recursions: * * p(k+1) = ncp/2 / (k+1) * p(k) * * B(a+k+1,b) = (a+k)/(a+b+k) * B(a+k,b) * * The new algorithm first determines for which k the k-th term is maximal, * and then sums outwards to both sides from the 'mid'. */ #include "nmath.h" #include "dpq.h" double dnbeta(double x, double a, double b, double ncp, int give_log) { const static double eps = 1.e-15; int kMax; double k, ncp2, dx2, d, D; LDOUBLE sum, term, p_k, q; #ifdef IEEE_754 if (ISNAN(x) || ISNAN(a) || ISNAN(b) || ISNAN(ncp)) return x + a + b + ncp; #endif if (ncp < 0 || a <= 0 || b <= 0) ML_WARN_return_NAN; if (!R_FINITE(a) || !R_FINITE(b) || !R_FINITE(ncp)) ML_WARN_return_NAN; if (x < 0 || x > 1) return(R_D__0); if(ncp == 0) return dbeta(x, a, b, give_log); /* New algorithm, starting with *largest* term : */ ncp2 = 0.5 * ncp; dx2 = ncp2*x; d = (dx2 - a - 1)/2; D = d*d + dx2 * (a + b) - a; if(D <= 0) { kMax = 0; } else { D = ceil(d + sqrt(D)); kMax = (D > 0) ? (int)D : 0; } /* The starting "middle term" --- first look at it's log scale: */ term = dbeta(x, a + kMax, b, /* log = */ TRUE); p_k = dpois_raw(kMax, ncp2, TRUE); if(x == 0. || !R_FINITE(term) || !R_FINITE((double)p_k)) /* if term = +Inf */ return R_D_exp((double)(p_k + term)); /* Now if s_k := p_k * t_k {here = exp(p_k + term)} would underflow, * we should rather scale everything and re-scale at the end:*/ p_k += term; /* = log(p_k) + log(t_k) == log(s_k) -- used at end to rescale */ /* mid = 1 = the rescaled value, instead of mid = exp(p_k); */ /* Now sum from the inside out */ sum = term = 1. /* = mid term */; /* middle to the left */ k = kMax; while(k > 0 && term > sum * eps) { k--; q = /* 1 / r_k = */ (k+1)*(k+a) / (k+a+b) / dx2; term *= q; sum += term; } /* middle to the right */ term = 1.; k = kMax; do { q = /* r_{old k} = */ dx2 * (k+a+b) / (k+a) / (k+1); k++; term *= q; sum += term; } while (term > sum * eps); #ifdef HAVE_LONG_DOUBLE return R_D_exp((double)(p_k + logl(sum))); #else return R_D_exp((double)(p_k + log(sum))); #endif }