# # ${R_HOME}/tests/Makefile VPATH = @srcdir@ srcdir = @srcdir@ top_srcdir = @top_srcdir@ top_builddir = .. subdir = tests include $(top_builddir)/Makeconf distdir = $(top_builddir)/$(PACKAGE)-$(VERSION)/$(subdir) test-src-gct = \ eval-etc.R \ simple-true.R \ arith-true.R \ arith.R \ lm-tests.R \ primitive-funs.R \ ok-errors.R \ method-dispatch.R test-src-strict-1 = \ $(test-src-gct) \ d-p-q-r-tests.R test-src-strict-auto = test-src-sloppy-1 = \ print-tests.R test-src-sloppy-auto = test-src-1 = $(test-src-strict-1) $(test-src-sloppy-1) test-src-auto = $(test-src-strict-auto) $(test-src-sloppy-auto) \ ${test-src-isas} ${test-src-segfault} test-src-sloppy = $(test-src-sloppy-1) $(test-src-sloppy-auto) test-src-strict = $(test-src-strict-1) $(test-src-strict-auto) test-src = $(test-src-strict) $(test-src-sloppy) test-src-demo = demos.R demos2.R test-src-internet = internet.R test-src-isas = isas-tests.R test-src-lapack = lapack.R test-src-nafns = nafns.R test-src-random = p-r-random-tests.R test-src-postscript = ps-tests.R test-src-ts = ts-tests.R test-src-segfault = no-segfault.R test-src-reg-1 = reg-tests-1.R reg-tests-2.R reg-IO.R reg-IO2.R reg-plot.R test-src-reg-auto = test-src-reg = $(test-src-reg-1) $(test-src-reg-auto) test-src-reg3 = reg-tests-3.R DISTFILES = Makefile.in Makefile.win README \ $(test-src-strict-1) $(test-src-strict-1:.R=.Rout.save) \ $(test-src-sloppy-1) $(test-src-sloppy-1:.R=.Rout.save) \ $(test-src-auto:.R=.Rin) isas-tests.Rout.save \ $(test-src-demo) demos.Rout.save \ $(test-src-internet) internet.Rout.save \ $(test-src-lapack) \ $(test-src-nafns) \ $(test-src-postscript) ps-tests.Rout.save \ $(test-src-random) p-r-random-tests.Rout.save \ $(test-src-reg) $(test-src-reg3) \ reg-IO.Rout.save reg-IO2.Rout.save reg-plot.Rout.save \ reg-plot.ps.save reg-tests-2.Rout.save reg-tests-3.Rout.save \ $(test-src-ts) \ gct-foot.R \ nanbug.rda SUBDIRS = Embedding Examples Native R = LC_ALL=C SRCDIR=$(srcdir) R_DEFAULT_PACKAGES= $(top_builddir)/bin/R --vanilla RDIFF = $(top_builddir)/bin/R CMD Rdiff test-out-strict = $(test-src-strict:.R=.Rout) test-out-sloppy = $(test-src-sloppy:.R=.Rout) test-out-gct = $(test-src-gct:.R=.Rout-gct) test-out-demo = $(test-src-demo:.R=.Rout) test-out-internet = $(test-src-internet:.R=.Rout) test-out-isas = $(test-src-isas:.R=.Rout) test-out-lapack = $(test-src-lapack:.R=.Rout) test-out-nafns = $(test-src-nafns:.R=.Rout) test-out-postscript = $(test-src-postscript:.R=.Rout) test-out-random = $(test-src-random:.R=.Rout) test-out-reg = $(test-src-reg:.R=.Rout) test-out-reg3 = $(test-src-reg3:.R=.Rout) test-out-segfault = $(test-src-segfault:.R=.Rout) test-out-ts = $(test-src-ts:.R=.Rout) ## This macro is used only for dependencies test-out = $(test-src:.R=.Rout) $(test-out-demo) $(test-out-gct) \ $(test-out-internet) $(test-out-lapack) $(test-out-nafns) \ $(test-out-random) $(test-out-postscript) $(test-out-reg) \ $(test-out-reg3) $(test-out-segfault) $(test-out-ts) $(test-out-isas) .SUFFIXES: .SUFFIXES: .R .Rin .Rout .Rout-gct all-basic-tests = Examples Specific Reg Internet all-devel-tests = IsAs Lapack Nafns Postscript Random Demo Segfault \ Standalone Packages all check: Makefile test-all-basics check-devel: check test-all-devel check-all: check-devel test-Packages-Recommended Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status @cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(test-out): Makefile stamp-R stamp-R: $(top_builddir)/bin/R.bin $(top_builddir)/library/base/R/base \ $(top_builddir)/library/methods/R/all.rda \ $(top_builddir)/library/methods/R/methods @touch $@ Makedeps: Makefile @(for f in $(test-src) $(test-src-reg) $(test-src-demo); do \ if test -f $(srcdir)/$${f}out.save ; then \ echo "$${f}out: $${f} \$$(srcdir)/$${f}out.save \$$(FORCE)"; \ else \ echo "$${f}out: $${f} \$$(FORCE)"; \ fi; \ if test -f $(srcdir)/$${f}in; then \ echo "$${f}: \$$(srcdir)/$${f}in stamp-R"; \ fi; \ done) >> Makefile @touch $@ FORCE: .Rin.R: @echo "creating '$@'" @$(R) < $< > /dev/null .R.Rout: @rm -f $@ $@.fail @echo $(ECHO_N) "running code in '$<' ...$(ECHO_C)" @$(R) < $< > $@ 2>&1 || (mv $@ $@.fail && exit 1) @echo "$(ECHO_T) OK" @if test -f $(srcdir)/$@.save ; then \ mv $@ $@.fail; \ echo $(ECHO_N) \ "comparing '$@' to '$(srcdir)/$@.save' ...$(ECHO_C)"; \ $(RDIFF) $@.fail $(srcdir)/$@.save $(RVAL_IF_DIFF) || exit 1; \ mv $@.fail $@; \ echo "$(ECHO_T) OK"; \ fi reg-plot.Rout: reg-plot.R @rm -f $@ $@.fail @echo $(ECHO_N) "running code in '$<' ...$(ECHO_C)" @$(R) < $< > $@ 2>&1 || (mv $@ $@.fail && exit 1) @echo "$(ECHO_T) OK" @if test -f $(srcdir)/$@.save ; then \ mv $@ $@.fail; \ echo $(ECHO_N) \ "comparing '$@' to '$(srcdir)/$@.save' ...$(ECHO_C)"; \ $(RDIFF) $@.fail $(srcdir)/$@.save $(RVAL_IF_DIFF) || exit 1; \ mv $@.fail $@; \ echo "$(ECHO_T) OK"; \ fi @echo $(ECHO_N) \ "comparing 'reg-plot.ps' to '$(srcdir)/reg-plot.ps.save' ...$(ECHO_C)" @$(RDIFF) reg-plot.ps $(srcdir)/reg-plot.ps.save $(RVAL_IF_DIFF) @echo "$(ECHO_T) OK" .R.Rout-gct: @echo "running gctorture() + '$<'" @(echo '.ptime <- proc.time(); gctorture()' ; \ cat $< $(srcdir)/gct-foot.R) | $(R) > $@ 2>&1 @mv $@ $@.fail; Ro=`basename $@ .Rout-gct`.Rout; \ if test ! -r $${Ro}; then $(MAKE) $${Ro}; fi; \ echo $(ECHO_N) "comparing '$@' to '$${Ro}' ...$(ECHO_C)"; \ grep -v 'gctorture()' $@.fail | $(RDIFF) - $${Ro} 1 || exit 1; \ mv $@.fail $@; \ echo "$(ECHO_T) OK" test-all-basics: Makefile @for name in $(all-basic-tests); do \ $(MAKE) test-$${name} || exit 1; \ done test-all-devel: Makefile @for name in $(all-devel-tests); do \ $(MAKE) test-$${name} || exit 1; \ done test-Examples: @(cd Examples && $(MAKE) $@) test-Examples-Recommended: @(cd Examples && $(MAKE) $@) test-Specific-strict: $(test-out-strict) test-Specific-sloppy: $(test-out-sloppy) test-Specific: @echo "updating test dependencies" @$(MAKE) Makedeps @echo "running strict specific tests" @$(MAKE) test-Specific-strict RVAL_IF_DIFF=1 @echo "running sloppy specific tests" @$(MAKE) test-Specific-sloppy RVAL_IF_DIFF=0 test-Packages: @for p in $(R_PKGS_BASE); do \ echo "checking package '$${p}'"; \ $(top_builddir)/bin/R CMD check --install=skip \ $(top_srcdir)/src/library/$${p} || echo; \ done test-Gct: $(test-out-gct) test-Demo: @echo "running demos from base and stats" @$(MAKE) $(test-out-demo) RVAL_IF_DIFF=0 ## ## These depend on an internet connection, and the sites being up. ## So allow this to fail: it may be slow doing so. test-Internet: @echo "running tests of Internet and socket functions" @echo " expect some differences" -@$(MAKE) $(test-out-internet) RVAL_IF_DIFF=0 ## test-IsAs: @echo "running tests of consistency of as/is.*" @$(MAKE) $(test-out-isas) RVAL_IF_DIFF=1 test-Lapack: @echo "running tests of LAPACK-based functions" @$(MAKE) $(test-out-lapack) RVAL_IF_DIFF=0 test-Nafns: @echo "running tests of NA handling functions" @$(MAKE) $(test-out-nafns) RVAL_IF_DIFF=0 test-Postscript: @echo "running tests of postscript() families" @$(MAKE) $(test-out-postscript) RVAL_IF_DIFF=0 test-Random: @echo "running tests of random deviate generation" @$(MAKE) $(test-out-random) RVAL_IF_DIFF=1 test-Reg: @echo "running regression tests" @$(MAKE) $(test-out-reg) RVAL_IF_DIFF=1 @$(MAKE) $(test-out-reg3) RVAL_IF_DIFF=0 test-Segfault: @echo "running tests to possibly trigger segfaults" @$(MAKE) $(test-out-segfault) RVAL_IF_DIFF=0 @rm -f data dumpdata.R F.Rd c0.Rd df0.Rd l0.Rd m0.Rd Rprof.out Rplots.* ## ## Not all platforms can build standalone. ## So allow this to fail. test-Standalone: @echo "testing building standalone Rmath" -@(cd $(top_builddir)/src/nmath/standalone; $(MAKE) check) ## test-Ts: @echo "running tests of package ts functions" @$(MAKE) $(test-out-ts) RVAL_IF_DIFF=0 test-DocFiles: @echo "checking Rd usage sections" @for p in $(R_PKGS_BASE); do \ echo $(ECHO_N) "package '$${p}' ...$(ECHO_C)"; \ out=`(echo "library(\"tools\")"; \ echo "checkDocFiles(package = \"$${p}\")") | \ $(R) -q | sed '/^>/d'`; \ if test -n "$${out}"; then \ echo "$(ECHO_T) WARNING"; \ echo; \ echo "$${out}"; \ echo; \ else \ echo "$(ECHO_T) OK"; \ fi; \ done test-DocStyle: @echo "checking S3 method documentation style" @for p in $(R_PKGS_BASE); do \ echo $(ECHO_N) "package '$${p}' ...$(ECHO_C)"; \ out=`(echo "library(\"tools\")"; \ echo "checkDocStyle(package = \"$${p}\")") | \ $(R) -q | sed '/^>/d'`; \ if test -n "$${out}"; then \ echo "$(ECHO_T) WARNING"; \ echo; \ echo "$${out}"; \ echo; \ else \ echo "$(ECHO_T) OK"; \ fi; \ done test-FF: @echo "checking foreign function calls" @for p in $(R_PKGS_BASE); do \ echo $(ECHO_N) "package '$${p}' ...$(ECHO_C)"; \ out=`(echo "library(\"tools\")"; \ echo "checkFF(package = \"$${p}\")") | \ $(R) -q | sed '/^>/d'`; \ if test -n "$${out}"; then \ echo "$(ECHO_T) WARNING"; \ echo "$${out}"; \ else \ echo "$(ECHO_T) OK"; \ fi; \ done test-S3methods: @echo "checking for S3 generic/method consistency" @for p in $(R_PKGS_BASE); do \ echo $(ECHO_N) "package '$${p}' ...$(ECHO_C)"; \ out=`(echo "library(\"tools\")"; \ echo "checkS3methods(package = \"$${p}\")") | \ $(R) -q | sed '/^>/d'`; \ if test -n "$${out}"; then \ echo "$(ECHO_T) WARNING"; \ echo; \ echo "$${out}"; \ echo; \ else \ echo "$(ECHO_T) OK"; \ fi; \ done test-codoc: @echo "checking for code/documentation mismatches in functions" @for p in $(R_PKGS_BASE); do \ echo $(ECHO_N) "package '$${p}' ...$(ECHO_C)"; \ out=`(echo "library(\"tools\")"; \ echo "codoc(package = \"$${p}\")") | \ $(R) -q | sed '/^>/d'`; \ if test -n "$${out}"; then \ echo "$(ECHO_T) WARNING"; \ echo; \ echo "$${out}"; \ echo; \ else \ echo "$(ECHO_T) OK"; \ fi; \ done test-undoc: @echo "checking for missing documentation entries" @for p in $(R_PKGS_BASE); do \ echo $(ECHO_N) "package '$${p}' ...$(ECHO_C)"; \ out=`(echo "library(\"tools\")"; \ echo "undoc(package = \"$${p}\")") | \ $(R) -q | sed '/^>/d'`; \ if test -n "$${out}"; then \ echo "$(ECHO_T) WARNING"; \ echo "$${out}"; \ else \ echo "$(ECHO_T) OK"; \ fi; \ done test-Packages-Recommended: @test -d Packages || mkdir Packages @for p in $(R_PKGS_RECOMMENDED_SOURCES); do \ gzip -dc "$(top_srcdir)/src/library/Recommended/$${p}.tgz" | \ (cd Packages && $(TAR) xf -) ; \ if grep "^Contains:" "Packages/$${p}/DESCRIPTION" >/dev/null; \ then \ echo "checking bundle '$${p}'"; \ else \ echo "checking package '$${p}'"; \ fi; \ R_LIBS= $(top_builddir)/bin/R CMD check --install=skip \ --library="$(top_builddir)/library" Packages/$${p} || echo; \ done mostlyclean: clean clean: -@for d in $(SUBDIRS); do \ (cd $${d} && $(MAKE) $@); \ done -@rm -f stamp-R Makedeps Rplot* Rprof.out *.Rd data dumpdata.R \ reg-plot.ps reg-tests-2.ps -@rm -rf anRpackage distclean: clean -@for d in $(SUBDIRS); do \ (cd $${d} && $(MAKE) $@); \ done -@rm -f Makefile $(test-out) $(test-src-auto) .RData -@rm -rf *.Rcheck Packages maintainer-clean: distclean R install install-strip uninstall TAGS info dvi: distdir: $(DISTFILES) @for f in $(DISTFILES); do \ test -f $(distdir)/$${f} \ || ln $(srcdir)/$${f} $(distdir)/$${f} 2>/dev/null \ || cp -p $(srcdir)/$${f} $(distdir)/$${f}; \ done @for d in $(SUBDIRS); do \ test -d $(distdir)/$${d} \ || mkdir $(distdir)/$${d} \ || exit 1; \ chmod 755 $(distdir)/$${d}; \ (cd $${d} && $(MAKE) distdir) \ || exit 1; \ done ## Automagically generated dependencies: